Details for: CL0000001

Cell ID: CL0000001

Cell Name: primary cultured cell

Marker Score Threshold: 387
(Derived using integrated single-cell and genomic data)

Description: A cultured cell that is freshly isolated from a organismal source, or derives in culture from such a cell prior to the culture being passaged.

Synonyms: primary cell culture cell, unpassaged cultured cell, primary cell line cell

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: ACTB (ENSG00000075624)
    Fold Change: 2.85
    Ensembl ID: ENSG00000075624
  • Gene Symbol: B2M (ENSG00000166710)
    Fold Change: 2.7
    Ensembl ID: ENSG00000166710
  • Gene Symbol: SLC25A6 (ENSG00000169100)
    Fold Change: 2.39
    Ensembl ID: ENSG00000169100
  • Gene Symbol: CFL1 (ENSG00000172757)
    Fold Change: 2.36
    Ensembl ID: ENSG00000172757
  • Gene Symbol: ACTG1 (ENSG00000184009)
    Fold Change: 2.36
    Ensembl ID: ENSG00000184009
  • Gene Symbol: COX4I1 (ENSG00000131143)
    Fold Change: 2.34
    Ensembl ID: ENSG00000131143
  • Gene Symbol: CIRBP (ENSG00000099622)
    Fold Change: 2.31
    Ensembl ID: ENSG00000099622
  • Gene Symbol: COX7C (ENSG00000127184)
    Fold Change: 2.29
    Ensembl ID: ENSG00000127184
  • Gene Symbol: CALM1 (ENSG00000198668)
    Fold Change: 2.16
    Ensembl ID: ENSG00000198668
  • Gene Symbol: BTF3 (ENSG00000145741)
    Fold Change: 2.15
    Ensembl ID: ENSG00000145741
  • Gene Symbol: BTG1 (ENSG00000133639)
    Fold Change: 2.08
    Ensembl ID: ENSG00000133639
  • Gene Symbol: ATP5MC2 (ENSG00000135390)
    Fold Change: 2.05
    Ensembl ID: ENSG00000135390
  • Gene Symbol: COX6C (ENSG00000164919)
    Fold Change: 1.99
    Ensembl ID: ENSG00000164919
  • Gene Symbol: ATP5F1E (ENSG00000124172)
    Fold Change: 1.98
    Ensembl ID: ENSG00000124172
  • Gene Symbol: RHOA (ENSG00000067560)
    Fold Change: 1.9
    Ensembl ID: ENSG00000067560
  • Gene Symbol: CDC42 (ENSG00000070831)
    Fold Change: 1.9
    Ensembl ID: ENSG00000070831
  • Gene Symbol: COX6B1 (ENSG00000126267)
    Fold Change: 1.87
    Ensembl ID: ENSG00000126267
  • Gene Symbol: COX7A2 (ENSG00000112695)
    Fold Change: 1.79
    Ensembl ID: ENSG00000112695
  • Gene Symbol: COX5B (ENSG00000135940)
    Fold Change: 1.78
    Ensembl ID: ENSG00000135940
  • Gene Symbol: CAPZB (ENSG00000077549)
    Fold Change: 1.75
    Ensembl ID: ENSG00000077549
  • Gene Symbol: CALM2 (ENSG00000143933)
    Fold Change: 1.74
    Ensembl ID: ENSG00000143933
  • Gene Symbol: CALR (ENSG00000179218)
    Fold Change: 1.74
    Ensembl ID: ENSG00000179218
  • Gene Symbol: CD63 (ENSG00000135404)
    Fold Change: 1.72
    Ensembl ID: ENSG00000135404
  • Gene Symbol: KLF6 (ENSG00000067082)
    Fold Change: 1.71
    Ensembl ID: ENSG00000067082
  • Gene Symbol: ZFP36L2 (ENSG00000152518)
    Fold Change: 1.69
    Ensembl ID: ENSG00000152518
  • Gene Symbol: COX6A1 (ENSG00000111775)
    Fold Change: 1.68
    Ensembl ID: ENSG00000111775
  • Gene Symbol: ARF1 (ENSG00000143761)
    Fold Change: 1.67
    Ensembl ID: ENSG00000143761
  • Gene Symbol: SEPTIN7 (ENSG00000122545)
    Fold Change: 1.66
    Ensembl ID: ENSG00000122545
  • Gene Symbol: COX8A (ENSG00000176340)
    Fold Change: 1.66
    Ensembl ID: ENSG00000176340
  • Gene Symbol: ATP5ME (ENSG00000169020)
    Fold Change: 1.65
    Ensembl ID: ENSG00000169020
  • Gene Symbol: ATP5F1D (ENSG00000099624)
    Fold Change: 1.59
    Ensembl ID: ENSG00000099624
  • Gene Symbol: ZFP36L1 (ENSG00000185650)
    Fold Change: 1.57
    Ensembl ID: ENSG00000185650
  • Gene Symbol: ATP5PF (ENSG00000154723)
    Fold Change: 1.57
    Ensembl ID: ENSG00000154723
  • Gene Symbol: ATP5MC3 (ENSG00000154518)
    Fold Change: 1.52
    Ensembl ID: ENSG00000154518
  • Gene Symbol: SLC25A5 (ENSG00000005022)
    Fold Change: 1.51
    Ensembl ID: ENSG00000005022
  • Gene Symbol: CYBA (ENSG00000051523)
    Fold Change: 1.51
    Ensembl ID: ENSG00000051523
  • Gene Symbol: CLIC1 (ENSG00000213719)
    Fold Change: 1.49
    Ensembl ID: ENSG00000213719
  • Gene Symbol: TMEM258 (ENSG00000134825)
    Fold Change: 1.48
    Ensembl ID: ENSG00000134825
  • Gene Symbol: ATP5F1B (ENSG00000110955)
    Fold Change: 1.47
    Ensembl ID: ENSG00000110955
  • Gene Symbol: ATRX (ENSG00000085224)
    Fold Change: 1.46
    Ensembl ID: ENSG00000085224
  • Gene Symbol: COX7B (ENSG00000131174)
    Fold Change: 1.45
    Ensembl ID: ENSG00000131174
  • Gene Symbol: DBI (ENSG00000155368)
    Fold Change: 1.45
    Ensembl ID: ENSG00000155368
  • Gene Symbol: BSG (ENSG00000172270)
    Fold Change: 1.41
    Ensembl ID: ENSG00000172270
  • Gene Symbol: CANX (ENSG00000127022)
    Fold Change: 1.4
    Ensembl ID: ENSG00000127022
  • Gene Symbol: CAST (ENSG00000153113)
    Fold Change: 1.39
    Ensembl ID: ENSG00000153113
  • Gene Symbol: ATF4 (ENSG00000128272)
    Fold Change: 1.38
    Ensembl ID: ENSG00000128272
  • Gene Symbol: CD74 (ENSG00000019582)
    Fold Change: 1.37
    Ensembl ID: ENSG00000019582
  • Gene Symbol: DAD1 (ENSG00000129562)
    Fold Change: 1.37
    Ensembl ID: ENSG00000129562
  • Gene Symbol: ATP5F1A (ENSG00000152234)
    Fold Change: 1.37
    Ensembl ID: ENSG00000152234
  • Gene Symbol: CSNK1A1 (ENSG00000113712)
    Fold Change: 1.37
    Ensembl ID: ENSG00000113712
  • Gene Symbol: CSTB (ENSG00000160213)
    Fold Change: 1.36
    Ensembl ID: ENSG00000160213
  • Gene Symbol: ATP5F1C (ENSG00000165629)
    Fold Change: 1.36
    Ensembl ID: ENSG00000165629
  • Gene Symbol: APRT (ENSG00000198931)
    Fold Change: 1.35
    Ensembl ID: ENSG00000198931
  • Gene Symbol: CLTA (ENSG00000122705)
    Fold Change: 1.34
    Ensembl ID: ENSG00000122705
  • Gene Symbol: AP2M1 (ENSG00000161203)
    Fold Change: 1.31
    Ensembl ID: ENSG00000161203
  • Gene Symbol: CLK1 (ENSG00000013441)
    Fold Change: 1.31
    Ensembl ID: ENSG00000013441
  • Gene Symbol: CAPZA1 (ENSG00000116489)
    Fold Change: 1.3
    Ensembl ID: ENSG00000116489
  • Gene Symbol: ARHGDIA (ENSG00000141522)
    Fold Change: 1.28
    Ensembl ID: ENSG00000141522
  • Gene Symbol: ANXA5 (ENSG00000164111)
    Fold Change: 1.27
    Ensembl ID: ENSG00000164111
  • Gene Symbol: ATP6V0B (ENSG00000117410)
    Fold Change: 1.26
    Ensembl ID: ENSG00000117410
  • Gene Symbol: TLE5 (ENSG00000104964)
    Fold Change: 1.25
    Ensembl ID: ENSG00000104964
  • Gene Symbol: CAPZA2 (ENSG00000198898)
    Fold Change: 1.23
    Ensembl ID: ENSG00000198898
  • Gene Symbol: ATP5PO (ENSG00000241837)
    Fold Change: 1.22
    Ensembl ID: ENSG00000241837
  • Gene Symbol: CALM3 (ENSG00000160014)
    Fold Change: 1.21
    Ensembl ID: ENSG00000160014
  • Gene Symbol: CTNNB1 (ENSG00000168036)
    Fold Change: 1.21
    Ensembl ID: ENSG00000168036
  • Gene Symbol: CST3 (ENSG00000101439)
    Fold Change: 1.2
    Ensembl ID: ENSG00000101439
  • Gene Symbol: ATP1A1 (ENSG00000163399)
    Fold Change: 1.2
    Ensembl ID: ENSG00000163399
  • Gene Symbol: ACTN4 (ENSG00000130402)
    Fold Change: 1.19
    Ensembl ID: ENSG00000130402
  • Gene Symbol: ARF4 (ENSG00000168374)
    Fold Change: 1.19
    Ensembl ID: ENSG00000168374
  • Gene Symbol: CTSD (ENSG00000117984)
    Fold Change: 1.18
    Ensembl ID: ENSG00000117984
  • Gene Symbol: CD47 (ENSG00000196776)
    Fold Change: 1.18
    Ensembl ID: ENSG00000196776
  • Gene Symbol: ATP5PB (ENSG00000116459)
    Fold Change: 1.17
    Ensembl ID: ENSG00000116459
  • Gene Symbol: AMD1 (ENSG00000123505)
    Fold Change: 1.17
    Ensembl ID: ENSG00000123505
  • Gene Symbol: ATP1B3 (ENSG00000069849)
    Fold Change: 1.16
    Ensembl ID: ENSG00000069849
  • Gene Symbol: CHD2 (ENSG00000173575)
    Fold Change: 1.15
    Ensembl ID: ENSG00000173575
  • Gene Symbol: AP2S1 (ENSG00000042753)
    Fold Change: 1.13
    Ensembl ID: ENSG00000042753
  • Gene Symbol: CD44 (ENSG00000026508)
    Fold Change: 1.13
    Ensembl ID: ENSG00000026508
  • Gene Symbol: FOXN3 (ENSG00000053254)
    Fold Change: 1.13
    Ensembl ID: ENSG00000053254
  • Gene Symbol: ARHGDIB (ENSG00000111348)
    Fold Change: 1.12
    Ensembl ID: ENSG00000111348
  • Gene Symbol: BNIP3L (ENSG00000104765)
    Fold Change: 1.12
    Ensembl ID: ENSG00000104765
  • Gene Symbol: ANXA11 (ENSG00000122359)
    Fold Change: 1.11
    Ensembl ID: ENSG00000122359
  • Gene Symbol: ANXA2 (ENSG00000182718)
    Fold Change: 1.1
    Ensembl ID: ENSG00000182718
  • Gene Symbol: CD81 (ENSG00000110651)
    Fold Change: 1.09
    Ensembl ID: ENSG00000110651
  • Gene Symbol: ATP5MC1 (ENSG00000159199)
    Fold Change: 1.08
    Ensembl ID: ENSG00000159199
  • Gene Symbol: ATP2B1 (ENSG00000070961)
    Fold Change: 1.08
    Ensembl ID: ENSG00000070961
  • Gene Symbol: ADAR (ENSG00000160710)
    Fold Change: 1.07
    Ensembl ID: ENSG00000160710
  • Gene Symbol: ARF6 (ENSG00000165527)
    Fold Change: 1.07
    Ensembl ID: ENSG00000165527
  • Gene Symbol: C1QBP (ENSG00000108561)
    Fold Change: 1.07
    Ensembl ID: ENSG00000108561
  • Gene Symbol: APLP2 (ENSG00000084234)
    Fold Change: 1.07
    Ensembl ID: ENSG00000084234
  • Gene Symbol: ASAH1 (ENSG00000104763)
    Fold Change: 1.07
    Ensembl ID: ENSG00000104763
  • Gene Symbol: TSPO (ENSG00000100300)
    Fold Change: 1.06
    Ensembl ID: ENSG00000100300
  • Gene Symbol: CHD1 (ENSG00000153922)
    Fold Change: 1.06
    Ensembl ID: ENSG00000153922
  • Gene Symbol: ALDOA (ENSG00000149925)
    Fold Change: 1.04
    Ensembl ID: ENSG00000149925
  • Gene Symbol: AP3S1 (ENSG00000177879)
    Fold Change: 1.04
    Ensembl ID: ENSG00000177879
  • Gene Symbol: CCND3 (ENSG00000112576)
    Fold Change: 1.02
    Ensembl ID: ENSG00000112576
  • Gene Symbol: CCT6A (ENSG00000146731)
    Fold Change: 1.01
    Ensembl ID: ENSG00000146731
  • Gene Symbol: CAMLG (ENSG00000164615)
    Fold Change: 1.01
    Ensembl ID: ENSG00000164615
  • Gene Symbol: CTSB (ENSG00000164733)
    Fold Change: 1.01
    Ensembl ID: ENSG00000164733
  • Gene Symbol: APEX1 (ENSG00000100823)
    Fold Change: N/A
    Ensembl ID: ENSG00000100823
  • Gene Symbol: AUP1 (ENSG00000115307)
    Fold Change: N/A
    Ensembl ID: ENSG00000115307
Hovered Details

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Hovered Details

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**Key Characteristics** 1. **Primary Cultured Cell**: The cell ID CL0000001 is a primary cultured cell, which means it is a cell that has not been passaged (repeatedly cultured) multiple times. 2. **ACTB Gene**: The cell expresses the ACTB gene, which encodes for beta-actin, a key component of the actin cytoskeleton. 3. **B2M Gene**: The cell expresses the B2M gene, which encodes for beta-2 microglobulin, a component of MHC class I molecules involved in antigen presentation. 4. **Immune System Function**: The cell's ontology includes pathways related to the immune system, including adaptive immune system, antigen processing and presentation, and cytokine signaling. 5. **Cell-Cell Junctions**: The cell's ontology includes pathways related to cell-cell junctions, including adherens junctions, tight junctions, and gap junctions. 6. **Actin Dynamics**: The cell's ontology includes pathways related to actin dynamics, including actin filament organization, actin polymerization, and actin depolymerization. **Clinical Significance** 1. **Disease Modeling**: The cell ID CL0000001 can be used to model various diseases, including autoimmune diseases, cancer, and infectious diseases. 2. **Immunology**: The cell's immune system function makes it an ideal model for studying immune system disorders and developing new immunotherapies. 3. **Cell Therapy**: The cell's ability to differentiate into various cell types makes it a potential candidate for cell therapy applications, including regenerative medicine and tissue engineering. 4. **Cancer Research**: The cell's ontology includes pathways related to cell proliferation, differentiation, and apoptosis, making it an ideal model for studying cancer biology and developing new cancer therapies. 5. **Neurological Disorders**: The cell's ontology includes pathways related to neuronal development, differentiation, and function, making it an ideal model for studying neurological disorders, including neurodegenerative diseases and neurological disorders. In conclusion, the cell ID CL0000001 is a primary cultured cell with a unique combination of genes and ontologies that make it an ideal model for studying various cellular processes, including immune system function, actin dynamics, and cell-cell junctions. Its clinical significance lies in its potential applications in disease modeling, immunology, cell therapy, cancer research, and neurological disorders.