Details for: CL0000617

Cell ID: CL0000617

Cell Name: GABAergic neuron

Marker Score Threshold: 4170
(Derived using integrated single-cell and genomic data)

Description: A neuron that uses GABA as a vesicular neurotransmitter

Synonyms: GABA-ergic neuron

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: CALM1 (ENSG00000198668)
    Fold Change: 6.33
    Ensembl ID: ENSG00000198668
  • Gene Symbol: CALM2 (ENSG00000143933)
    Fold Change: 6
    Ensembl ID: ENSG00000143933
  • Gene Symbol: APC (ENSG00000134982)
    Fold Change: 5.05
    Ensembl ID: ENSG00000134982
  • Gene Symbol: DST (ENSG00000151914)
    Fold Change: 4.84
    Ensembl ID: ENSG00000151914
  • Gene Symbol: ACTB (ENSG00000075624)
    Fold Change: 4.29
    Ensembl ID: ENSG00000075624
  • Gene Symbol: KRIT1 (ENSG00000001631)
    Fold Change: 3.66
    Ensembl ID: ENSG00000001631
  • Gene Symbol: CIRBP (ENSG00000099622)
    Fold Change: 3.5
    Ensembl ID: ENSG00000099622
  • Gene Symbol: CDH2 (ENSG00000170558)
    Fold Change: 3.36
    Ensembl ID: ENSG00000170558
  • Gene Symbol: ANK2 (ENSG00000145362)
    Fold Change: 3.29
    Ensembl ID: ENSG00000145362
  • Gene Symbol: CALM3 (ENSG00000160014)
    Fold Change: 3.26
    Ensembl ID: ENSG00000160014
  • Gene Symbol: CFL1 (ENSG00000172757)
    Fold Change: 3.2
    Ensembl ID: ENSG00000172757
  • Gene Symbol: ATP1B1 (ENSG00000143153)
    Fold Change: 3.16
    Ensembl ID: ENSG00000143153
  • Gene Symbol: CDC42 (ENSG00000070831)
    Fold Change: 3.03
    Ensembl ID: ENSG00000070831
  • Gene Symbol: ATP5PO (ENSG00000241837)
    Fold Change: 2.99
    Ensembl ID: ENSG00000241837
  • Gene Symbol: CHD3 (ENSG00000170004)
    Fold Change: 2.98
    Ensembl ID: ENSG00000170004
  • Gene Symbol: CANX (ENSG00000127022)
    Fold Change: 2.93
    Ensembl ID: ENSG00000127022
  • Gene Symbol: CCND2 (ENSG00000118971)
    Fold Change: 2.76
    Ensembl ID: ENSG00000118971
  • Gene Symbol: CHD4 (ENSG00000111642)
    Fold Change: 2.71
    Ensembl ID: ENSG00000111642
  • Gene Symbol: CKB (ENSG00000166165)
    Fold Change: 2.67
    Ensembl ID: ENSG00000166165
  • Gene Symbol: APLP2 (ENSG00000084234)
    Fold Change: 2.63
    Ensembl ID: ENSG00000084234
  • Gene Symbol: AP2M1 (ENSG00000161203)
    Fold Change: 2.62
    Ensembl ID: ENSG00000161203
  • Gene Symbol: BNIP3L (ENSG00000104765)
    Fold Change: 2.55
    Ensembl ID: ENSG00000104765
  • Gene Symbol: ARF1 (ENSG00000143761)
    Fold Change: 2.49
    Ensembl ID: ENSG00000143761
  • Gene Symbol: ANK3 (ENSG00000151150)
    Fold Change: 2.34
    Ensembl ID: ENSG00000151150
  • Gene Symbol: ARL3 (ENSG00000138175)
    Fold Change: 2.31
    Ensembl ID: ENSG00000138175
  • Gene Symbol: CDC5L (ENSG00000096401)
    Fold Change: 2.26
    Ensembl ID: ENSG00000096401
  • Gene Symbol: CHD2 (ENSG00000173575)
    Fold Change: 2.22
    Ensembl ID: ENSG00000173575
  • Gene Symbol: APP (ENSG00000142192)
    Fold Change: 2.19
    Ensembl ID: ENSG00000142192
  • Gene Symbol: ATP2B1 (ENSG00000070961)
    Fold Change: 2.07
    Ensembl ID: ENSG00000070961
  • Gene Symbol: BCL7A (ENSG00000110987)
    Fold Change: 2.01
    Ensembl ID: ENSG00000110987
  • Gene Symbol: CALR (ENSG00000179218)
    Fold Change: 1.91
    Ensembl ID: ENSG00000179218
  • Gene Symbol: CAMLG (ENSG00000164615)
    Fold Change: 1.86
    Ensembl ID: ENSG00000164615
  • Gene Symbol: CLU (ENSG00000120885)
    Fold Change: 1.81
    Ensembl ID: ENSG00000120885
  • Gene Symbol: BTG1 (ENSG00000133639)
    Fold Change: 1.78
    Ensembl ID: ENSG00000133639
  • Gene Symbol: ARF4 (ENSG00000168374)
    Fold Change: 1.77
    Ensembl ID: ENSG00000168374
  • Gene Symbol: CLK1 (ENSG00000013441)
    Fold Change: 1.76
    Ensembl ID: ENSG00000013441
  • Gene Symbol: SLC25A6 (ENSG00000169100)
    Fold Change: 1.74
    Ensembl ID: ENSG00000169100
  • Gene Symbol: CHRM3 (ENSG00000133019)
    Fold Change: 1.72
    Ensembl ID: ENSG00000133019
  • Gene Symbol: TRIM23 (ENSG00000113595)
    Fold Change: 1.68
    Ensembl ID: ENSG00000113595
  • Gene Symbol: ADCY2 (ENSG00000078295)
    Fold Change: 1.67
    Ensembl ID: ENSG00000078295
  • Gene Symbol: CAMK2B (ENSG00000058404)
    Fold Change: 1.63
    Ensembl ID: ENSG00000058404
  • Gene Symbol: APLP1 (ENSG00000105290)
    Fold Change: 1.6
    Ensembl ID: ENSG00000105290
  • Gene Symbol: ATP1A1 (ENSG00000163399)
    Fold Change: 1.6
    Ensembl ID: ENSG00000163399
  • Gene Symbol: CHGB (ENSG00000089199)
    Fold Change: 1.58
    Ensembl ID: ENSG00000089199
  • Gene Symbol: BMPR2 (ENSG00000204217)
    Fold Change: 1.54
    Ensembl ID: ENSG00000204217
  • Gene Symbol: ADD1 (ENSG00000087274)
    Fold Change: 1.52
    Ensembl ID: ENSG00000087274
  • Gene Symbol: VPS51 (ENSG00000149823)
    Fold Change: 1.48
    Ensembl ID: ENSG00000149823
  • Gene Symbol: ALDOA (ENSG00000149925)
    Fold Change: 1.47
    Ensembl ID: ENSG00000149925
  • Gene Symbol: BTF3 (ENSG00000145741)
    Fold Change: 1.47
    Ensembl ID: ENSG00000145741
  • Gene Symbol: CHML (ENSG00000203668)
    Fold Change: 1.45
    Ensembl ID: ENSG00000203668
  • Gene Symbol: CAMK4 (ENSG00000152495)
    Fold Change: 1.45
    Ensembl ID: ENSG00000152495
  • Gene Symbol: BIRC2 (ENSG00000110330)
    Fold Change: 1.42
    Ensembl ID: ENSG00000110330
  • Gene Symbol: AP2B1 (ENSG00000006125)
    Fold Change: 1.42
    Ensembl ID: ENSG00000006125
  • Gene Symbol: ATP6V0A1 (ENSG00000033627)
    Fold Change: 1.4
    Ensembl ID: ENSG00000033627
  • Gene Symbol: RHOA (ENSG00000067560)
    Fold Change: 1.39
    Ensembl ID: ENSG00000067560
  • Gene Symbol: CCNG2 (ENSG00000138764)
    Fold Change: 1.38
    Ensembl ID: ENSG00000138764
  • Gene Symbol: CALB2 (ENSG00000172137)
    Fold Change: 1.38
    Ensembl ID: ENSG00000172137
  • Gene Symbol: CCT6A (ENSG00000146731)
    Fold Change: 1.36
    Ensembl ID: ENSG00000146731
  • Gene Symbol: CAPZA2 (ENSG00000198898)
    Fold Change: 1.35
    Ensembl ID: ENSG00000198898
  • Gene Symbol: ATP2B2 (ENSG00000157087)
    Fold Change: 1.32
    Ensembl ID: ENSG00000157087
  • Gene Symbol: CAPZB (ENSG00000077549)
    Fold Change: 1.32
    Ensembl ID: ENSG00000077549
  • Gene Symbol: ATP6V1A (ENSG00000114573)
    Fold Change: 1.31
    Ensembl ID: ENSG00000114573
  • Gene Symbol: ATP6V0B (ENSG00000117410)
    Fold Change: 1.3
    Ensembl ID: ENSG00000117410
  • Gene Symbol: CHD1 (ENSG00000153922)
    Fold Change: 1.3
    Ensembl ID: ENSG00000153922
  • Gene Symbol: ATP2A2 (ENSG00000174437)
    Fold Change: 1.3
    Ensembl ID: ENSG00000174437
  • Gene Symbol: ACAT1 (ENSG00000075239)
    Fold Change: 1.29
    Ensembl ID: ENSG00000075239
  • Gene Symbol: CACNA1A (ENSG00000141837)
    Fold Change: 1.29
    Ensembl ID: ENSG00000141837
  • Gene Symbol: ATP5F1B (ENSG00000110955)
    Fold Change: 1.28
    Ensembl ID: ENSG00000110955
  • Gene Symbol: CACNA1B (ENSG00000148408)
    Fold Change: 1.26
    Ensembl ID: ENSG00000148408
  • Gene Symbol: CDH13 (ENSG00000140945)
    Fold Change: 1.26
    Ensembl ID: ENSG00000140945
  • Gene Symbol: FOXN3 (ENSG00000053254)
    Fold Change: 1.24
    Ensembl ID: ENSG00000053254
  • Gene Symbol: APBB1 (ENSG00000166313)
    Fold Change: 1.23
    Ensembl ID: ENSG00000166313
  • Gene Symbol: ADRA1B (ENSG00000170214)
    Fold Change: 1.23
    Ensembl ID: ENSG00000170214
  • Gene Symbol: ACP1 (ENSG00000143727)
    Fold Change: 1.2
    Ensembl ID: ENSG00000143727
  • Gene Symbol: BSG (ENSG00000172270)
    Fold Change: 1.18
    Ensembl ID: ENSG00000172270
  • Gene Symbol: CDH9 (ENSG00000113100)
    Fold Change: 1.18
    Ensembl ID: ENSG00000113100
  • Gene Symbol: ASIC2 (ENSG00000108684)
    Fold Change: 1.17
    Ensembl ID: ENSG00000108684
  • Gene Symbol: CACNA1C (ENSG00000151067)
    Fold Change: 1.17
    Ensembl ID: ENSG00000151067
  • Gene Symbol: CLCN3 (ENSG00000109572)
    Fold Change: 1.16
    Ensembl ID: ENSG00000109572
  • Gene Symbol: CDKN1B (ENSG00000111276)
    Fold Change: 1.15
    Ensembl ID: ENSG00000111276
  • Gene Symbol: APEX1 (ENSG00000100823)
    Fold Change: 1.15
    Ensembl ID: ENSG00000100823
  • Gene Symbol: ADGRB3 (ENSG00000135298)
    Fold Change: 1.15
    Ensembl ID: ENSG00000135298
  • Gene Symbol: ALCAM (ENSG00000170017)
    Fold Change: 1.15
    Ensembl ID: ENSG00000170017
  • Gene Symbol: BICD1 (ENSG00000151746)
    Fold Change: 1.14
    Ensembl ID: ENSG00000151746
  • Gene Symbol: ARHGAP5 (ENSG00000100852)
    Fold Change: 1.14
    Ensembl ID: ENSG00000100852
  • Gene Symbol: RERE (ENSG00000142599)
    Fold Change: 1.11
    Ensembl ID: ENSG00000142599
  • Gene Symbol: ACADM (ENSG00000117054)
    Fold Change: 1.09
    Ensembl ID: ENSG00000117054
  • Gene Symbol: AMD1 (ENSG00000123505)
    Fold Change: 1.09
    Ensembl ID: ENSG00000123505
  • Gene Symbol: ATP5F1A (ENSG00000152234)
    Fold Change: 1.06
    Ensembl ID: ENSG00000152234
  • Gene Symbol: CHN1 (ENSG00000128656)
    Fold Change: 1.06
    Ensembl ID: ENSG00000128656
  • Gene Symbol: RCC1 (ENSG00000180198)
    Fold Change: 1.06
    Ensembl ID: ENSG00000180198
  • Gene Symbol: CLN3 (ENSG00000188603)
    Fold Change: 1.05
    Ensembl ID: ENSG00000188603
  • Gene Symbol: CDO1 (ENSG00000129596)
    Fold Change: 1.04
    Ensembl ID: ENSG00000129596
  • Gene Symbol: RUNX2 (ENSG00000124813)
    Fold Change: 1.03
    Ensembl ID: ENSG00000124813
  • Gene Symbol: CACNB4 (ENSG00000182389)
    Fold Change: 1.02
    Ensembl ID: ENSG00000182389
  • Gene Symbol: CD81 (ENSG00000110651)
    Fold Change: 1.02
    Ensembl ID: ENSG00000110651
  • Gene Symbol: ADARB2 (ENSG00000185736)
    Fold Change: 1.01
    Ensembl ID: ENSG00000185736
  • Gene Symbol: CACNB2 (ENSG00000165995)
    Fold Change: 1.01
    Ensembl ID: ENSG00000165995
  • Gene Symbol: AP2S1 (ENSG00000042753)
    Fold Change: 1
    Ensembl ID: ENSG00000042753
  • Gene Symbol: ADAR (ENSG00000160710)
    Fold Change: 1
    Ensembl ID: ENSG00000160710
Hovered Details

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Hovered Details

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**Key Characteristics** * GABAergic neuron: uses GABA as a vesicular neurotransmitter * CALM1 and CALM2 genes: encode proteins involved in calcium signaling and regulation * Signaling pathways: + AMPK downstream of NMDA receptors + Activation of Ca-permeable kainate receptors + Activation of kainate receptors upon glutamate binding + Activation of NMDA receptors and postsynaptic events + Activation of Rac1 downstream of NMDA receptors + Adenylate cyclase activator activity + Anti-inflammatory response favoring Leishmania parasite infection + Antigen activates B cell receptor (BCR) leading to generation of second messengers + Autophagosome membrane docking + Bacterial infection pathways + Beta-catenin independent Wnt signaling + C-type lectin receptors (CLRs) + Ca-dependent events + Ca2+ pathway + Calcineurin activates NFAT + Calcium-dependent protein binding + Calcium channel complex + Calcium channel inhibitor activity + Calcium ion binding + Calmodulin-induced events + Cam-PDE 1 activation + CamK IV-mediated phosphorylation of CREB + Cam pathway + Cardiac conduction + Catalytic complex + Cellular response to interferon-beta + Cellular response to type II interferon + Centrosome + CLEC7A (Dectin-1) induces NFAT activation + CLEC7A (Dectin-1) signaling + CREB1 phosphorylation through NMDA receptor-mediated activation of Ras signaling + CREB1 phosphorylation through the activation of adenylate cyclase + CREB1 phosphorylation through the activation of CamKII/CamKK/CamKIV cascade + Cytoplasm + Cytosol + DAG and IP3 signaling + DARPP-32 events + Detection of calcium ion + Disease + Diseases of signal transduction by growth factor receptors and second messengers + Disorders of developmental biology + Disorders of nervous system development + Downstream signaling events of B cell receptor (BCR) + ENOS activation + ESR-mediated signaling + Extra-nuclear estrogen signaling + Extracellular region + Fc epsilon receptor (FcERI) signaling + FcERI-mediated Ca2+ mobilization + FcGR3A-mediated IL-10 synthesis + G-protein mediated events + G2/M transition of mitotic cell cycle + G alpha (i) signaling events + Gene expression (transcription) + Generic transcription pathway + Glycogen breakdown (glycogenolysis) + Glycogen metabolism + GPCR downstream signaling + G protein-coupled receptor signaling pathway + Hemostasis + Immune system + Inactivation + Recovery and regulation of the phototransduction cascade + Infectious disease + Innate immune system + Inositol phosphate metabolism + Intracellular signaling by second messengers + Ion channel transport + Ion homeostasis + Ionotropic activity of kainate receptors + Ion transport by p-type ATPases + Leishmania infection + Leishmania parasite growth and survival + Long-term potentiation + Loss of function of MECP2 in Rett syndrome + Loss of phosphorylation of MECP2 at T308 + MAPK1/MapK3 signaling + MAPK family signaling cascades + Membrane trafficking + Metabolism + Metabolism of carbohydrates + Metabolism of cofactors + Metabolism of nitric oxide: NOS3 activation and regulation + Metabolism of proteins + Metabolism of vitamins and cofactors + Mitochondrial biogenesis + Mitochondrion-endoplasmic reticulum membrane tethering + Muscle contraction + Myelin sheath + Negative regulation of calcium ion export across plasma membrane + Negative regulation of high voltage-gated calcium channel activity + Negative regulation of NMDA receptor-mediated neuronal transmission + Negative regulation of peptidyl-threonine phosphorylation + Negative regulation of ryanodine-sensitive calcium-release channel activity + Neuronal system + Neurotransmitter receptors and postsynaptic signal transmission + Nucleoplasm + Nucleus + Oncogenic MAPK signaling + Opioid signaling + Organelle biogenesis and maintenance + Organelle localization by membrane tethering + Paradoxical activation of Ras signaling by kinase-inactive BRAF + Parasitic infection pathways + Pervasive developmental disorders + Phase 0 - rapid depolarization + PKA-mediated phosphorylation of CREB + PKA activation + Plasma membrane + Platelet activation, signaling, and aggregation + Platelet calcium homeostasis + Platelet degranulation + Platelet homeostasis + PLc beta-mediated events + Positive regulation of cyclic-nucleotide phosphodiesterase activity + Positive regulation of peptidyl-threonine phosphorylation + Positive regulation of phosphoprotein phosphatase activity + Positive regulation of protein autophosphorylation + Positive regulation of protein dephosphorylation + Positive regulation of protein serine/threonine kinase activity + Positive regulation of receptor signaling pathway via Jak-STAT + Positive regulation of ryanodine-sensitive calcium-release channel activity + Post-translational protein modification + Post-NMDA receptor activation events + Protein-containing complex + Protein binding + Protein kinase binding + Protein methylation + Protein phosphatase activator activity + Protein serine/threonine kinase activator activity + Raf/MAPK cascade + Raf activation + Ras activation upon Ca2+ influx through NMDA receptor + Ras processing + Reduction of cytosolic Ca++ levels + Regulation of calcium-mediated signaling + Regulation of cardiac muscle cell action potential + Regulation of cardiac muscle contraction + Regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion + Regulation of cell communication by electrical coupling involved in cardiac conduction + Regulation of cytokinesis + Regulation of heart rate + Regulation of MECP2 expression and activity + Regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum + Regulation of ryanodine-sensitive calcium-release channel activity + Response to calcium ion + Response to elevated platelet cytosolic Ca2+ + Rho GTPase effectors + Rho GTPases activate IQGAPs + Rho GTPases activate PAKs + RNA polymerase II transcription + Sarcomere + Sensory perception + Signaling by Braf and Raf1 fusions + Signaling by GPCR + Signaling by moderate kinase activity BRAF mutants + Signaling by nuclear receptors + Signaling by Raf1 mutants + Signaling by Ras mutants + Signaling by receptor tyrosine kinases + Signaling by Rho GTPases, Miro GTPases, and RhobtB3 + Signaling by the B cell receptor (BCR) + Signaling by VEGF + Signaling by Wnt + Signaling downstream of Ras mutants + Signal transduction + SLC-mediated transmembrane transport + Smooth muscle contraction + Sodium/calcium exchangers + Sperm midpiece + Spindle microtubule + Spindle pole + Stimuli-sensing channels + Substantia nigra development + Synthesis of IP3 and IP4 in the cytosol + Tetrahydrobiopterin (BH4) synthesis, recycling, salvage, and regulation + The phototransduction cascade + Titin binding + Transcriptional activation of mitochondrial biogenesis + Transcriptional regulation by MECP2 + Translocation of SLC2A4 (Glut4) to the plasma membrane + Transmembrane transporter binding + Transmission across chemical synapses + Transport of inorganic cations/anions and amino acids/oligopeptides + Transport of small molecules + Unblocking of NMDA receptors, glutamate binding, and activation + Uptake and actions of bacterial toxins +