Details for: CL0000827

Cell ID: CL0000827

Cell Name: pro-T cell

Marker Score Threshold: 4093
(Derived using integrated single-cell and genomic data)

Description: A lymphoid progenitor cell of the T cell lineage, with some lineage specific marker expression, but not yet fully committed to the T cell lineage.

Synonyms: pro-T lymphocyte, progenitor T cell, DN1 cell, DN1 thymocyte, TN1 cell

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: AIF1 (ENSG00000204472)
    Fold Change: 2.89
    Ensembl ID: ENSG00000204472
  • Gene Symbol: ARHGDIB (ENSG00000111348)
    Fold Change: 2.88
    Ensembl ID: ENSG00000111348
  • Gene Symbol: BTF3 (ENSG00000145741)
    Fold Change: 2.83
    Ensembl ID: ENSG00000145741
  • Gene Symbol: ATP5MC2 (ENSG00000135390)
    Fold Change: 2.82
    Ensembl ID: ENSG00000135390
  • Gene Symbol: ACTG1 (ENSG00000184009)
    Fold Change: 2.82
    Ensembl ID: ENSG00000184009
  • Gene Symbol: SLC25A6 (ENSG00000169100)
    Fold Change: 2.81
    Ensembl ID: ENSG00000169100
  • Gene Symbol: B2M (ENSG00000166710)
    Fold Change: 2.81
    Ensembl ID: ENSG00000166710
  • Gene Symbol: ACTB (ENSG00000075624)
    Fold Change: 2.81
    Ensembl ID: ENSG00000075624
  • Gene Symbol: ALDOA (ENSG00000149925)
    Fold Change: 2.78
    Ensembl ID: ENSG00000149925
  • Gene Symbol: SLC25A5 (ENSG00000005022)
    Fold Change: 2.78
    Ensembl ID: ENSG00000005022
  • Gene Symbol: ATP5F1E (ENSG00000124172)
    Fold Change: 2.77
    Ensembl ID: ENSG00000124172
  • Gene Symbol: ADA (ENSG00000196839)
    Fold Change: 2.75
    Ensembl ID: ENSG00000196839
  • Gene Symbol: CALM2 (ENSG00000143933)
    Fold Change: 2.75
    Ensembl ID: ENSG00000143933
  • Gene Symbol: ATP5MC3 (ENSG00000154518)
    Fold Change: 2.74
    Ensembl ID: ENSG00000154518
  • Gene Symbol: ATP5F1A (ENSG00000152234)
    Fold Change: 2.73
    Ensembl ID: ENSG00000152234
  • Gene Symbol: ATP5F1B (ENSG00000110955)
    Fold Change: 2.72
    Ensembl ID: ENSG00000110955
  • Gene Symbol: ATP5PO (ENSG00000241837)
    Fold Change: 2.67
    Ensembl ID: ENSG00000241837
  • Gene Symbol: APRT (ENSG00000198931)
    Fold Change: 2.67
    Ensembl ID: ENSG00000198931
  • Gene Symbol: ATP5PF (ENSG00000154723)
    Fold Change: 2.64
    Ensembl ID: ENSG00000154723
  • Gene Symbol: C1QBP (ENSG00000108561)
    Fold Change: 2.63
    Ensembl ID: ENSG00000108561
  • Gene Symbol: APEX1 (ENSG00000100823)
    Fold Change: 2.63
    Ensembl ID: ENSG00000100823
  • Gene Symbol: ATP5F1D (ENSG00000099624)
    Fold Change: 2.61
    Ensembl ID: ENSG00000099624
  • Gene Symbol: ATP5F1C (ENSG00000165629)
    Fold Change: 2.61
    Ensembl ID: ENSG00000165629
  • Gene Symbol: ZFP36L2 (ENSG00000152518)
    Fold Change: 2.59
    Ensembl ID: ENSG00000152518
  • Gene Symbol: RHOA (ENSG00000067560)
    Fold Change: 2.54
    Ensembl ID: ENSG00000067560
  • Gene Symbol: CALR (ENSG00000179218)
    Fold Change: 2.52
    Ensembl ID: ENSG00000179218
  • Gene Symbol: BST2 (ENSG00000130303)
    Fold Change: 2.51
    Ensembl ID: ENSG00000130303
  • Gene Symbol: ATP5PB (ENSG00000116459)
    Fold Change: 2.51
    Ensembl ID: ENSG00000116459
  • Gene Symbol: TMEM258 (ENSG00000134825)
    Fold Change: 2.44
    Ensembl ID: ENSG00000134825
  • Gene Symbol: TSPO (ENSG00000100300)
    Fold Change: 2.39
    Ensembl ID: ENSG00000100300
  • Gene Symbol: ATP5MC1 (ENSG00000159199)
    Fold Change: 2.35
    Ensembl ID: ENSG00000159199
  • Gene Symbol: ARF1 (ENSG00000143761)
    Fold Change: 2.26
    Ensembl ID: ENSG00000143761
  • Gene Symbol: ATP6V0B (ENSG00000117410)
    Fold Change: 2.22
    Ensembl ID: ENSG00000117410
  • Gene Symbol: BTG1 (ENSG00000133639)
    Fold Change: 2.2
    Ensembl ID: ENSG00000133639
  • Gene Symbol: PARP1 (ENSG00000143799)
    Fold Change: 2.2
    Ensembl ID: ENSG00000143799
  • Gene Symbol: ATP5ME (ENSG00000169020)
    Fold Change: 2.19
    Ensembl ID: ENSG00000169020
  • Gene Symbol: RHOG (ENSG00000177105)
    Fold Change: 2.19
    Ensembl ID: ENSG00000177105
  • Gene Symbol: BSG (ENSG00000172270)
    Fold Change: 2.17
    Ensembl ID: ENSG00000172270
  • Gene Symbol: ATF4 (ENSG00000128272)
    Fold Change: 2.04
    Ensembl ID: ENSG00000128272
  • Gene Symbol: CALM3 (ENSG00000160014)
    Fold Change: 2.02
    Ensembl ID: ENSG00000160014
  • Gene Symbol: ACP1 (ENSG00000143727)
    Fold Change: 1.99
    Ensembl ID: ENSG00000143727
  • Gene Symbol: RHOH (ENSG00000168421)
    Fold Change: 1.96
    Ensembl ID: ENSG00000168421
  • Gene Symbol: ANXA11 (ENSG00000122359)
    Fold Change: 1.93
    Ensembl ID: ENSG00000122359
  • Gene Symbol: ARHGDIA (ENSG00000141522)
    Fold Change: 1.93
    Ensembl ID: ENSG00000141522
  • Gene Symbol: BIN1 (ENSG00000136717)
    Fold Change: 1.92
    Ensembl ID: ENSG00000136717
  • Gene Symbol: ARL2 (ENSG00000213465)
    Fold Change: 1.88
    Ensembl ID: ENSG00000213465
  • Gene Symbol: CALM1 (ENSG00000198668)
    Fold Change: 1.85
    Ensembl ID: ENSG00000198668
  • Gene Symbol: BAG1 (ENSG00000107262)
    Fold Change: 1.84
    Ensembl ID: ENSG00000107262
  • Gene Symbol: BAX (ENSG00000087088)
    Fold Change: 1.81
    Ensembl ID: ENSG00000087088
  • Gene Symbol: BID (ENSG00000015475)
    Fold Change: 1.79
    Ensembl ID: ENSG00000015475
  • Gene Symbol: CANX (ENSG00000127022)
    Fold Change: 1.77
    Ensembl ID: ENSG00000127022
  • Gene Symbol: ADH5 (ENSG00000197894)
    Fold Change: 1.75
    Ensembl ID: ENSG00000197894
  • Gene Symbol: AKR1B1 (ENSG00000085662)
    Fold Change: 1.71
    Ensembl ID: ENSG00000085662
  • Gene Symbol: LDLRAD4 (ENSG00000168675)
    Fold Change: 1.68
    Ensembl ID: ENSG00000168675
  • Gene Symbol: ATIC (ENSG00000138363)
    Fold Change: 1.66
    Ensembl ID: ENSG00000138363
  • Gene Symbol: ANXA6 (ENSG00000197043)
    Fold Change: 1.66
    Ensembl ID: ENSG00000197043
  • Gene Symbol: CAMLG (ENSG00000164615)
    Fold Change: 1.65
    Ensembl ID: ENSG00000164615
  • Gene Symbol: ATRX (ENSG00000085224)
    Fold Change: 1.62
    Ensembl ID: ENSG00000085224
  • Gene Symbol: AHCY (ENSG00000101444)
    Fold Change: 1.61
    Ensembl ID: ENSG00000101444
  • Gene Symbol: ATP1B3 (ENSG00000069849)
    Fold Change: 1.6
    Ensembl ID: ENSG00000069849
  • Gene Symbol: ATOX1 (ENSG00000177556)
    Fold Change: 1.59
    Ensembl ID: ENSG00000177556
  • Gene Symbol: AUP1 (ENSG00000115307)
    Fold Change: 1.59
    Ensembl ID: ENSG00000115307
  • Gene Symbol: GET3 (ENSG00000198356)
    Fold Change: 1.58
    Ensembl ID: ENSG00000198356
  • Gene Symbol: ANXA1 (ENSG00000135046)
    Fold Change: 1.56
    Ensembl ID: ENSG00000135046
  • Gene Symbol: ARF5 (ENSG00000004059)
    Fold Change: 1.56
    Ensembl ID: ENSG00000004059
  • Gene Symbol: AMD1 (ENSG00000123505)
    Fold Change: 1.54
    Ensembl ID: ENSG00000123505
  • Gene Symbol: ADSL (ENSG00000239900)
    Fold Change: 1.53
    Ensembl ID: ENSG00000239900
  • Gene Symbol: ARF4 (ENSG00000168374)
    Fold Change: 1.52
    Ensembl ID: ENSG00000168374
  • Gene Symbol: TLE5 (ENSG00000104964)
    Fold Change: 1.51
    Ensembl ID: ENSG00000104964
  • Gene Symbol: ACAA1 (ENSG00000060971)
    Fold Change: 1.51
    Ensembl ID: ENSG00000060971
  • Gene Symbol: AAMP (ENSG00000127837)
    Fold Change: 1.49
    Ensembl ID: ENSG00000127837
  • Gene Symbol: VPS51 (ENSG00000149823)
    Fold Change: 1.48
    Ensembl ID: ENSG00000149823
  • Gene Symbol: ACADVL (ENSG00000072778)
    Fold Change: 1.46
    Ensembl ID: ENSG00000072778
  • Gene Symbol: AK2 (ENSG00000004455)
    Fold Change: 1.45
    Ensembl ID: ENSG00000004455
  • Gene Symbol: ACADM (ENSG00000117054)
    Fold Change: 1.44
    Ensembl ID: ENSG00000117054
  • Gene Symbol: ANXA7 (ENSG00000138279)
    Fold Change: 1.43
    Ensembl ID: ENSG00000138279
  • Gene Symbol: ASAH1 (ENSG00000104763)
    Fold Change: 1.43
    Ensembl ID: ENSG00000104763
  • Gene Symbol: BNIP3L (ENSG00000104765)
    Fold Change: 1.43
    Ensembl ID: ENSG00000104765
  • Gene Symbol: ATP6V1E1 (ENSG00000131100)
    Fold Change: 1.42
    Ensembl ID: ENSG00000131100
  • Gene Symbol: ALDH2 (ENSG00000111275)
    Fold Change: 1.35
    Ensembl ID: ENSG00000111275
  • Gene Symbol: ACAT2 (ENSG00000120437)
    Fold Change: 1.26
    Ensembl ID: ENSG00000120437
  • Gene Symbol: ACTL6A (ENSG00000136518)
    Fold Change: 1.23
    Ensembl ID: ENSG00000136518
  • Gene Symbol: ADAR (ENSG00000160710)
    Fold Change: 1.23
    Ensembl ID: ENSG00000160710
  • Gene Symbol: ARF6 (ENSG00000165527)
    Fold Change: 1.22
    Ensembl ID: ENSG00000165527
  • Gene Symbol: ABCF1 (ENSG00000204574)
    Fold Change: 1.22
    Ensembl ID: ENSG00000204574
  • Gene Symbol: ARF3 (ENSG00000134287)
    Fold Change: 1.22
    Ensembl ID: ENSG00000134287
  • Gene Symbol: ARHGAP4 (ENSG00000089820)
    Fold Change: 1.19
    Ensembl ID: ENSG00000089820
  • Gene Symbol: ADSS2 (ENSG00000035687)
    Fold Change: 1.19
    Ensembl ID: ENSG00000035687
  • Gene Symbol: BTK (ENSG00000010671)
    Fold Change: 1.18
    Ensembl ID: ENSG00000010671
  • Gene Symbol: ARRB2 (ENSG00000141480)
    Fold Change: 1.14
    Ensembl ID: ENSG00000141480
  • Gene Symbol: BAD (ENSG00000002330)
    Fold Change: 1.13
    Ensembl ID: ENSG00000002330
  • Gene Symbol: ACO2 (ENSG00000100412)
    Fold Change: 1.12
    Ensembl ID: ENSG00000100412
  • Gene Symbol: A1BG (ENSG00000121410)
    Fold Change: 1.11
    Ensembl ID: ENSG00000121410
  • Gene Symbol: PTTG1IP (ENSG00000183255)
    Fold Change: 1.1
    Ensembl ID: ENSG00000183255
  • Gene Symbol: APEH (ENSG00000164062)
    Fold Change: 1.07
    Ensembl ID: ENSG00000164062
  • Gene Symbol: APP (ENSG00000142192)
    Fold Change: 1.06
    Ensembl ID: ENSG00000142192
  • Gene Symbol: ACTN4 (ENSG00000130402)
    Fold Change: 1.03
    Ensembl ID: ENSG00000130402
  • Gene Symbol: ADD3 (ENSG00000148700)
    Fold Change: 1.02
    Ensembl ID: ENSG00000148700
  • Gene Symbol: FMNL1 (ENSG00000184922)
    Fold Change: 1.01
    Ensembl ID: ENSG00000184922
  • Gene Symbol: BCL7A (ENSG00000110987)
    Fold Change: 1
    Ensembl ID: ENSG00000110987
Hovered Details

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Hovered Details

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**Key Characteristics** The pro-T cell (CL0000827) is a lymphoid progenitor cell of the T cell lineage. It is characterized by the expression of some lineage-specific markers, but has not yet fully committed to the T cell lineage. The cell's gene symbol is AIF1, and its Ensembl ID is ENSG00000204472. The cell's pathways and ontology are involved in various cellular processes, including: * Actin crosslink formation * Calcium ion binding * Cellular response to oxidative stress * Regulation of gene expression The cell's gene symbols ARHGDIB, BTF3, ATP5MC2, ACTG1, and SLC25A6 are also provided, along with their Ensembl IDs. These genes are involved in various cellular processes, including: * ARHGDIB: involved in actin filament bundle assembly and regulation of gene expression * BTF3: involved in protein binding and regulation of gene expression * ATP5MC2: involved in mitochondrial biogenesis and proton motive force-driven ATP synthesis * ACTG1: involved in actin filament assembly and regulation of gene expression * SLC25A6: involved in ATP:ADP antiporter activity and regulation of gene expression **Clinical Significance** The pro-T cell (CL0000827) is a critical cell type in the immune system, and its dysregulation has been implicated in various immune-related disorders. The cell's pathways and ontology involved in actin crosslink formation, calcium ion binding, cellular response to oxidative stress, and regulation of gene expression are also relevant to various diseases, including: * Autoimmune diseases: dysregulation of pro-T cells has been implicated in autoimmune diseases, such as rheumatoid arthritis and multiple sclerosis. * Cancer: dysregulation of pro-T cells has been implicated in various types of cancer, including T cell lymphoma and leukemia. * Infections: dysregulation of pro-T cells has been implicated in various infections, including HIV and influenza. Overall, the pro-T cell (CL0000827) is a critical cell type in the immune system, and its dysregulation has significant implications for various diseases, including autoimmune diseases, cancer, and infections.