Details for: CL0000893

Cell ID: CL0000893

Cell Name: thymocyte

Marker Score Threshold: 1047
(Derived using integrated single-cell and genomic data)

Description: An immature T cell located in the thymus.

Synonyms: immature T cell, immature T lymphocyte, immature T-cell, immature T-lymphocyte, thymic lymphocyte

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: A1BG (ENSG00000121410)
    Fold Change: 11.82
    Ensembl ID: ENSG00000121410
  • Gene Symbol: BTK (ENSG00000010671)
    Fold Change: 5.25
    Ensembl ID: ENSG00000010671
  • Gene Symbol: LDLRAD4 (ENSG00000168675)
    Fold Change: 2.9
    Ensembl ID: ENSG00000168675
  • Gene Symbol: RUNX1 (ENSG00000159216)
    Fold Change: 2.53
    Ensembl ID: ENSG00000159216
  • Gene Symbol: CD33 (ENSG00000105383)
    Fold Change: 2.46
    Ensembl ID: ENSG00000105383
  • Gene Symbol: ATP5F1E (ENSG00000124172)
    Fold Change: 2.44
    Ensembl ID: ENSG00000124172
  • Gene Symbol: ACTG1 (ENSG00000184009)
    Fold Change: 2.43
    Ensembl ID: ENSG00000184009
  • Gene Symbol: CD247 (ENSG00000198821)
    Fold Change: 2.43
    Ensembl ID: ENSG00000198821
  • Gene Symbol: CAMK4 (ENSG00000152495)
    Fold Change: 2.43
    Ensembl ID: ENSG00000152495
  • Gene Symbol: ATP5MC2 (ENSG00000135390)
    Fold Change: 2.37
    Ensembl ID: ENSG00000135390
  • Gene Symbol: SLC25A6 (ENSG00000169100)
    Fold Change: 2.33
    Ensembl ID: ENSG00000169100
  • Gene Symbol: ATP5F1A (ENSG00000152234)
    Fold Change: 2.33
    Ensembl ID: ENSG00000152234
  • Gene Symbol: ATP5MC3 (ENSG00000154518)
    Fold Change: 2.32
    Ensembl ID: ENSG00000154518
  • Gene Symbol: ATP5F1B (ENSG00000110955)
    Fold Change: 2.31
    Ensembl ID: ENSG00000110955
  • Gene Symbol: AIF1 (ENSG00000204472)
    Fold Change: 2.31
    Ensembl ID: ENSG00000204472
  • Gene Symbol: KYAT1 (ENSG00000171097)
    Fold Change: 2.26
    Ensembl ID: ENSG00000171097
  • Gene Symbol: SEPTIN7 (ENSG00000122545)
    Fold Change: 2.21
    Ensembl ID: ENSG00000122545
  • Gene Symbol: ATP5PB (ENSG00000116459)
    Fold Change: 2.17
    Ensembl ID: ENSG00000116459
  • Gene Symbol: ATP5F1C (ENSG00000165629)
    Fold Change: 2.16
    Ensembl ID: ENSG00000165629
  • Gene Symbol: ATP5F1D (ENSG00000099624)
    Fold Change: 2.13
    Ensembl ID: ENSG00000099624
  • Gene Symbol: ATP5PF (ENSG00000154723)
    Fold Change: 2.12
    Ensembl ID: ENSG00000154723
  • Gene Symbol: CCND3 (ENSG00000112576)
    Fold Change: 2.09
    Ensembl ID: ENSG00000112576
  • Gene Symbol: ATP5ME (ENSG00000169020)
    Fold Change: 2.07
    Ensembl ID: ENSG00000169020
  • Gene Symbol: ACTB (ENSG00000075624)
    Fold Change: 2.07
    Ensembl ID: ENSG00000075624
  • Gene Symbol: BTF3 (ENSG00000145741)
    Fold Change: 2.03
    Ensembl ID: ENSG00000145741
  • Gene Symbol: TLE5 (ENSG00000104964)
    Fold Change: 2.02
    Ensembl ID: ENSG00000104964
  • Gene Symbol: SLC25A5 (ENSG00000005022)
    Fold Change: 1.99
    Ensembl ID: ENSG00000005022
  • Gene Symbol: CFL1 (ENSG00000172757)
    Fold Change: 1.95
    Ensembl ID: ENSG00000172757
  • Gene Symbol: B2M (ENSG00000166710)
    Fold Change: 1.93
    Ensembl ID: ENSG00000166710
  • Gene Symbol: AREG (ENSG00000109321)
    Fold Change: 1.9
    Ensembl ID: ENSG00000109321
  • Gene Symbol: CALM1 (ENSG00000198668)
    Fold Change: 1.87
    Ensembl ID: ENSG00000198668
  • Gene Symbol: ATRX (ENSG00000085224)
    Fold Change: 1.84
    Ensembl ID: ENSG00000085224
  • Gene Symbol: RHOH (ENSG00000168421)
    Fold Change: 1.81
    Ensembl ID: ENSG00000168421
  • Gene Symbol: RHOA (ENSG00000067560)
    Fold Change: 1.8
    Ensembl ID: ENSG00000067560
  • Gene Symbol: CALM2 (ENSG00000143933)
    Fold Change: 1.75
    Ensembl ID: ENSG00000143933
  • Gene Symbol: APRT (ENSG00000198931)
    Fold Change: 1.72
    Ensembl ID: ENSG00000198931
  • Gene Symbol: TMEM258 (ENSG00000134825)
    Fold Change: 1.7
    Ensembl ID: ENSG00000134825
  • Gene Symbol: LRBA (ENSG00000198589)
    Fold Change: 1.68
    Ensembl ID: ENSG00000198589
  • Gene Symbol: BTG1 (ENSG00000133639)
    Fold Change: 1.67
    Ensembl ID: ENSG00000133639
  • Gene Symbol: ATP5PO (ENSG00000241837)
    Fold Change: 1.62
    Ensembl ID: ENSG00000241837
  • Gene Symbol: CDC42 (ENSG00000070831)
    Fold Change: 1.59
    Ensembl ID: ENSG00000070831
  • Gene Symbol: ARF1 (ENSG00000143761)
    Fold Change: 1.58
    Ensembl ID: ENSG00000143761
  • Gene Symbol: CAPZB (ENSG00000077549)
    Fold Change: 1.57
    Ensembl ID: ENSG00000077549
  • Gene Symbol: ALDOA (ENSG00000149925)
    Fold Change: 1.57
    Ensembl ID: ENSG00000149925
  • Gene Symbol: CDK6 (ENSG00000105810)
    Fold Change: 1.54
    Ensembl ID: ENSG00000105810
  • Gene Symbol: BAX (ENSG00000087088)
    Fold Change: 1.5
    Ensembl ID: ENSG00000087088
  • Gene Symbol: RERE (ENSG00000142599)
    Fold Change: 1.47
    Ensembl ID: ENSG00000142599
  • Gene Symbol: CCT6A (ENSG00000146731)
    Fold Change: 1.44
    Ensembl ID: ENSG00000146731
  • Gene Symbol: ATP6V0B (ENSG00000117410)
    Fold Change: 1.43
    Ensembl ID: ENSG00000117410
  • Gene Symbol: CALM3 (ENSG00000160014)
    Fold Change: 1.43
    Ensembl ID: ENSG00000160014
  • Gene Symbol: CHD1 (ENSG00000153922)
    Fold Change: 1.42
    Ensembl ID: ENSG00000153922
  • Gene Symbol: ARHGDIA (ENSG00000141522)
    Fold Change: 1.42
    Ensembl ID: ENSG00000141522
  • Gene Symbol: ATP5MC1 (ENSG00000159199)
    Fold Change: 1.4
    Ensembl ID: ENSG00000159199
  • Gene Symbol: ARF5 (ENSG00000004059)
    Fold Change: 1.4
    Ensembl ID: ENSG00000004059
  • Gene Symbol: CD3E (ENSG00000198851)
    Fold Change: 1.38
    Ensembl ID: ENSG00000198851
  • Gene Symbol: C1QBP (ENSG00000108561)
    Fold Change: 1.37
    Ensembl ID: ENSG00000108561
  • Gene Symbol: CALR (ENSG00000179218)
    Fold Change: 1.35
    Ensembl ID: ENSG00000179218
  • Gene Symbol: BSG (ENSG00000172270)
    Fold Change: 1.35
    Ensembl ID: ENSG00000172270
  • Gene Symbol: ZFP36L2 (ENSG00000152518)
    Fold Change: 1.32
    Ensembl ID: ENSG00000152518
  • Gene Symbol: ACP1 (ENSG00000143727)
    Fold Change: 1.29
    Ensembl ID: ENSG00000143727
  • Gene Symbol: ADK (ENSG00000156110)
    Fold Change: 1.29
    Ensembl ID: ENSG00000156110
  • Gene Symbol: APEX1 (ENSG00000100823)
    Fold Change: 1.29
    Ensembl ID: ENSG00000100823
  • Gene Symbol: CAPZA1 (ENSG00000116489)
    Fold Change: 1.29
    Ensembl ID: ENSG00000116489
  • Gene Symbol: CD3G (ENSG00000160654)
    Fold Change: 1.27
    Ensembl ID: ENSG00000160654
  • Gene Symbol: ADAM10 (ENSG00000137845)
    Fold Change: 1.26
    Ensembl ID: ENSG00000137845
  • Gene Symbol: ADD3 (ENSG00000148700)
    Fold Change: 1.26
    Ensembl ID: ENSG00000148700
  • Gene Symbol: CD63 (ENSG00000135404)
    Fold Change: 1.24
    Ensembl ID: ENSG00000135404
  • Gene Symbol: CD38 (ENSG00000004468)
    Fold Change: 1.21
    Ensembl ID: ENSG00000004468
  • Gene Symbol: ANXA5 (ENSG00000164111)
    Fold Change: 1.2
    Ensembl ID: ENSG00000164111
  • Gene Symbol: ARF4 (ENSG00000168374)
    Fold Change: 1.18
    Ensembl ID: ENSG00000168374
  • Gene Symbol: GET3 (ENSG00000198356)
    Fold Change: 1.18
    Ensembl ID: ENSG00000198356
  • Gene Symbol: FOXN3 (ENSG00000053254)
    Fold Change: 1.18
    Ensembl ID: ENSG00000053254
  • Gene Symbol: ALDH3B2 (ENSG00000132746)
    Fold Change: 1.18
    Ensembl ID: ENSG00000132746
  • Gene Symbol: ADGRE5 (ENSG00000123146)
    Fold Change: 1.17
    Ensembl ID: ENSG00000123146
  • Gene Symbol: ATF4 (ENSG00000128272)
    Fold Change: 1.17
    Ensembl ID: ENSG00000128272
  • Gene Symbol: CANX (ENSG00000127022)
    Fold Change: 1.16
    Ensembl ID: ENSG00000127022
  • Gene Symbol: ATP1A1 (ENSG00000163399)
    Fold Change: 1.15
    Ensembl ID: ENSG00000163399
  • Gene Symbol: CD47 (ENSG00000196776)
    Fold Change: 1.15
    Ensembl ID: ENSG00000196776
  • Gene Symbol: CAPZA2 (ENSG00000198898)
    Fold Change: 1.14
    Ensembl ID: ENSG00000198898
  • Gene Symbol: PARP1 (ENSG00000143799)
    Fold Change: 1.14
    Ensembl ID: ENSG00000143799
  • Gene Symbol: ANXA11 (ENSG00000122359)
    Fold Change: 1.13
    Ensembl ID: ENSG00000122359
  • Gene Symbol: ATP6AP1 (ENSG00000071553)
    Fold Change: 1.11
    Ensembl ID: ENSG00000071553
  • Gene Symbol: ARHGDIB (ENSG00000111348)
    Fold Change: 1.11
    Ensembl ID: ENSG00000111348
  • Gene Symbol: ATP1A3 (ENSG00000105409)
    Fold Change: 1.1
    Ensembl ID: ENSG00000105409
  • Gene Symbol: RHOG (ENSG00000177105)
    Fold Change: 1.1
    Ensembl ID: ENSG00000177105
  • Gene Symbol: ARHGAP4 (ENSG00000089820)
    Fold Change: 1.09
    Ensembl ID: ENSG00000089820
  • Gene Symbol: ADH5 (ENSG00000197894)
    Fold Change: 1.09
    Ensembl ID: ENSG00000197894
  • Gene Symbol: BCL2L1 (ENSG00000171552)
    Fold Change: 1.08
    Ensembl ID: ENSG00000171552
  • Gene Symbol: ATP1B3 (ENSG00000069849)
    Fold Change: 1.08
    Ensembl ID: ENSG00000069849
  • Gene Symbol: CAPN3 (ENSG00000092529)
    Fold Change: 1.08
    Ensembl ID: ENSG00000092529
  • Gene Symbol: ACADVL (ENSG00000072778)
    Fold Change: 1.07
    Ensembl ID: ENSG00000072778
  • Gene Symbol: ARF6 (ENSG00000165527)
    Fold Change: 1.06
    Ensembl ID: ENSG00000165527
  • Gene Symbol: BCL2 (ENSG00000171791)
    Fold Change: 1.06
    Ensembl ID: ENSG00000171791
  • Gene Symbol: ADAR (ENSG00000160710)
    Fold Change: 1.06
    Ensembl ID: ENSG00000160710
  • Gene Symbol: ATP6V1G2 (ENSG00000213760)
    Fold Change: 1.05
    Ensembl ID: ENSG00000213760
  • Gene Symbol: ANXA1 (ENSG00000135046)
    Fold Change: 1.03
    Ensembl ID: ENSG00000135046
  • Gene Symbol: AUP1 (ENSG00000115307)
    Fold Change: 1.03
    Ensembl ID: ENSG00000115307
  • Gene Symbol: CTSC (ENSG00000109861)
    Fold Change: 1.02
    Ensembl ID: ENSG00000109861
  • Gene Symbol: ATOX1 (ENSG00000177556)
    Fold Change: 1.02
    Ensembl ID: ENSG00000177556
  • Gene Symbol: CAMLG (ENSG00000164615)
    Fold Change: 1
    Ensembl ID: ENSG00000164615
Hovered Details

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Hovered Details

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**Key Characteristics** Thymocytes are characterized by their immature T cell phenotype and their location in the thymus. They are derived from hematopoietic stem cells and undergo a process of maturation and selection in the thymus, where they interact with other cells, such as antigen-presenting cells and other thymocytes. Thymocytes express a range of surface receptors, including T cell receptors (TCRs), which are essential for recognizing and responding to antigens. Thymocytes also express a range of intracellular proteins, including transcription factors, kinases, and signaling molecules, which are involved in regulating gene expression, cell proliferation, and differentiation. The genes associated with thymocytes, such as A1BG and BTK, are involved in various cellular processes, including immune system development, cell signaling, and gene expression regulation. **Clinical Significance** Thymocytes play a crucial role in the development and maturation of T lymphocytes, which are essential for specific immune responses against pathogens and foreign substances. Abnormalities in thymocyte development and function have been associated with various immune-related disorders, including immunodeficiency diseases, autoimmune diseases, and cancer. Thymocytes are also involved in the regulation of immune responses, including the activation and regulation of T cells, B cells, and other immune cells. The genes associated with thymocytes, such as RUNX1, are involved in regulating immune responses, including the regulation of gene expression, cell proliferation, and differentiation. In addition, thymocytes are involved in the regulation of cellular processes, including cell-cell interactions, signaling, and gene expression regulation. The genes associated with thymocytes, such as LDLRAD4, are involved in regulating cellular processes, including the regulation of gene expression, cell proliferation, and differentiation. Overall, thymocytes play a crucial role in the development and maturation of T lymphocytes and are involved in regulating immune responses, cellular processes, and gene expression regulation. Abnormalities in thymocyte development and function have been associated with various immune-related disorders, and the genes associated with thymocytes are involved in regulating immune responses, cellular processes, and gene expression regulation.