Details for: CL4023036
Cell ID: CL4023036
Cell Name: chandelier pvalb GABAergic cortical interneuron
Marker Score Threshold: 4,146
(Derived using integrated single-cell and genomic data)
Description: A transcriptomically distinct pvalb GABAergic cortical interneuron that is recognizable by the straight terminal axonal 'cartridges' of vertically oriented strings of synaptic boutons. Chandelier PV cells' boutons target exclusively the axon initial segment (AIS) of pyramidal cells, with a single cell innervating hundreds of pyramidal cells in a clustered manner. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Chandelier.
Synonyms: Chandelier PV
Genes (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Gene Symbol: ADGRB3 (ENSG00000135298)
Fold Change: 2.62
Ensembl ID: ENSG00000135298 - Gene Symbol: GRIA1 (ENSG00000155511)
Fold Change: 2.62
Ensembl ID: ENSG00000155511 - Gene Symbol: DLG2 (ENSG00000150672)
Fold Change: 2.62
Ensembl ID: ENSG00000150672 - Gene Symbol: FGF14 (ENSG00000102466)
Fold Change: 2.62
Ensembl ID: ENSG00000102466 - Gene Symbol: GRIA4 (ENSG00000152578)
Fold Change: 2.62
Ensembl ID: ENSG00000152578 - Gene Symbol: FGF12 (ENSG00000114279)
Fold Change: 2.62
Ensembl ID: ENSG00000114279 - Gene Symbol: DOCK3 (ENSG00000088538)
Fold Change: 2.62
Ensembl ID: ENSG00000088538 - Gene Symbol: GABRG3 (ENSG00000182256)
Fold Change: 2.62
Ensembl ID: ENSG00000182256 - Gene Symbol: DAB1 (ENSG00000173406)
Fold Change: 2.62
Ensembl ID: ENSG00000173406 - Gene Symbol: ERBB4 (ENSG00000178568)
Fold Change: 2.62
Ensembl ID: ENSG00000178568 - Gene Symbol: GRIK2 (ENSG00000164418)
Fold Change: 2.62
Ensembl ID: ENSG00000164418 - Gene Symbol: GRIN2B (ENSG00000273079)
Fold Change: 2.62
Ensembl ID: ENSG00000273079 - Gene Symbol: GRM5 (ENSG00000168959)
Fold Change: 2.62
Ensembl ID: ENSG00000168959 - Gene Symbol: CACNA1A (ENSG00000141837)
Fold Change: 2.62
Ensembl ID: ENSG00000141837 - Gene Symbol: DPP6 (ENSG00000130226)
Fold Change: 2.61
Ensembl ID: ENSG00000130226 - Gene Symbol: CTNND2 (ENSG00000169862)
Fold Change: 2.61
Ensembl ID: ENSG00000169862 - Gene Symbol: GRID1 (ENSG00000182771)
Fold Change: 2.61
Ensembl ID: ENSG00000182771 - Gene Symbol: ANK2 (ENSG00000145362)
Fold Change: 2.61
Ensembl ID: ENSG00000145362 - Gene Symbol: ALK (ENSG00000171094)
Fold Change: 2.6
Ensembl ID: ENSG00000171094 - Gene Symbol: GPM6A (ENSG00000150625)
Fold Change: 2.6
Ensembl ID: ENSG00000150625 - Gene Symbol: DGKB (ENSG00000136267)
Fold Change: 2.6
Ensembl ID: ENSG00000136267 - Gene Symbol: CNTN1 (ENSG00000018236)
Fold Change: 2.6
Ensembl ID: ENSG00000018236 - Gene Symbol: CTNNA2 (ENSG00000066032)
Fold Change: 2.6
Ensembl ID: ENSG00000066032 - Gene Symbol: GABRB2 (ENSG00000145864)
Fold Change: 2.6
Ensembl ID: ENSG00000145864 - Gene Symbol: ANK3 (ENSG00000151150)
Fold Change: 2.6
Ensembl ID: ENSG00000151150 - Gene Symbol: DTNA (ENSG00000134769)
Fold Change: 2.59
Ensembl ID: ENSG00000134769 - Gene Symbol: GRIA2 (ENSG00000120251)
Fold Change: 2.59
Ensembl ID: ENSG00000120251 - Gene Symbol: GRIA3 (ENSG00000125675)
Fold Change: 2.59
Ensembl ID: ENSG00000125675 - Gene Symbol: ANK1 (ENSG00000029534)
Fold Change: 2.58
Ensembl ID: ENSG00000029534 - Gene Symbol: ATP2B2 (ENSG00000157087)
Fold Change: 2.58
Ensembl ID: ENSG00000157087 - Gene Symbol: DST (ENSG00000151914)
Fold Change: 2.57
Ensembl ID: ENSG00000151914 - Gene Symbol: ADCY8 (ENSG00000155897)
Fold Change: 2.57
Ensembl ID: ENSG00000155897 - Gene Symbol: CACNA1D (ENSG00000157388)
Fold Change: 2.56
Ensembl ID: ENSG00000157388 - Gene Symbol: GRID2 (ENSG00000152208)
Fold Change: 2.56
Ensembl ID: ENSG00000152208 - Gene Symbol: CACNB4 (ENSG00000182389)
Fold Change: 2.56
Ensembl ID: ENSG00000182389 - Gene Symbol: CACNA1B (ENSG00000148408)
Fold Change: 2.56
Ensembl ID: ENSG00000148408 - Gene Symbol: GRK3 (ENSG00000100077)
Fold Change: 2.54
Ensembl ID: ENSG00000100077 - Gene Symbol: CDH12 (ENSG00000154162)
Fold Change: 2.52
Ensembl ID: ENSG00000154162 - Gene Symbol: LDLRAD4 (ENSG00000168675)
Fold Change: 2.52
Ensembl ID: ENSG00000168675 - Gene Symbol: ASTN1 (ENSG00000152092)
Fold Change: 2.51
Ensembl ID: ENSG00000152092 - Gene Symbol: APP (ENSG00000142192)
Fold Change: 2.51
Ensembl ID: ENSG00000142192 - Gene Symbol: RERE (ENSG00000142599)
Fold Change: 2.51
Ensembl ID: ENSG00000142599 - Gene Symbol: DAPK1 (ENSG00000196730)
Fold Change: 2.51
Ensembl ID: ENSG00000196730 - Gene Symbol: DMD (ENSG00000198947)
Fold Change: 2.5
Ensembl ID: ENSG00000198947 - Gene Symbol: CA8 (ENSG00000178538)
Fold Change: 2.5
Ensembl ID: ENSG00000178538 - Gene Symbol: FGF13 (ENSG00000129682)
Fold Change: 2.5
Ensembl ID: ENSG00000129682 - Gene Symbol: FER (ENSG00000151422)
Fold Change: 2.49
Ensembl ID: ENSG00000151422 - Gene Symbol: BICD1 (ENSG00000151746)
Fold Change: 2.47
Ensembl ID: ENSG00000151746 - Gene Symbol: ELAVL3 (ENSG00000196361)
Fold Change: 2.47
Ensembl ID: ENSG00000196361 - Gene Symbol: CACNA1C (ENSG00000151067)
Fold Change: 2.47
Ensembl ID: ENSG00000151067 - Gene Symbol: GABRB3 (ENSG00000166206)
Fold Change: 2.46
Ensembl ID: ENSG00000166206 - Gene Symbol: ADCY1 (ENSG00000164742)
Fold Change: 2.43
Ensembl ID: ENSG00000164742 - Gene Symbol: ADCY2 (ENSG00000078295)
Fold Change: 2.43
Ensembl ID: ENSG00000078295 - Gene Symbol: ADK (ENSG00000156110)
Fold Change: 2.43
Ensembl ID: ENSG00000156110 - Gene Symbol: APC (ENSG00000134982)
Fold Change: 2.43
Ensembl ID: ENSG00000134982 - Gene Symbol: GNAQ (ENSG00000156052)
Fold Change: 2.42
Ensembl ID: ENSG00000156052 - Gene Symbol: GNAL (ENSG00000141404)
Fold Change: 2.42
Ensembl ID: ENSG00000141404 - Gene Symbol: EXT1 (ENSG00000182197)
Fold Change: 2.42
Ensembl ID: ENSG00000182197 - Gene Symbol: DTNB (ENSG00000138101)
Fold Change: 2.41
Ensembl ID: ENSG00000138101 - Gene Symbol: CAMK4 (ENSG00000152495)
Fold Change: 2.41
Ensembl ID: ENSG00000152495 - Gene Symbol: INPP4A (ENSG00000040933)
Fold Change: 2.41
Ensembl ID: ENSG00000040933 - Gene Symbol: ATP1B1 (ENSG00000143153)
Fold Change: 2.41
Ensembl ID: ENSG00000143153 - Gene Symbol: EPHA5 (ENSG00000145242)
Fold Change: 2.4
Ensembl ID: ENSG00000145242 - Gene Symbol: GTF2I (ENSG00000263001)
Fold Change: 2.4
Ensembl ID: ENSG00000263001 - Gene Symbol: DNM1 (ENSG00000106976)
Fold Change: 2.4
Ensembl ID: ENSG00000106976 - Gene Symbol: ACACA (ENSG00000278540)
Fold Change: 2.39
Ensembl ID: ENSG00000278540 - Gene Symbol: CDH18 (ENSG00000145526)
Fold Change: 2.39
Ensembl ID: ENSG00000145526 - Gene Symbol: CAMK2B (ENSG00000058404)
Fold Change: 2.39
Ensembl ID: ENSG00000058404 - Gene Symbol: RUNX2 (ENSG00000124813)
Fold Change: 2.38
Ensembl ID: ENSG00000124813 - Gene Symbol: DYNC1I1 (ENSG00000158560)
Fold Change: 2.38
Ensembl ID: ENSG00000158560 - Gene Symbol: GNAO1 (ENSG00000087258)
Fold Change: 2.38
Ensembl ID: ENSG00000087258 - Gene Symbol: ATRX (ENSG00000085224)
Fold Change: 2.37
Ensembl ID: ENSG00000085224 - Gene Symbol: CAMK2D (ENSG00000145349)
Fold Change: 2.37
Ensembl ID: ENSG00000145349 - Gene Symbol: ALCAM (ENSG00000170017)
Fold Change: 2.37
Ensembl ID: ENSG00000170017 - Gene Symbol: FYN (ENSG00000010810)
Fold Change: 2.35
Ensembl ID: ENSG00000010810 - Gene Symbol: CCNH (ENSG00000134480)
Fold Change: 2.34
Ensembl ID: ENSG00000134480 - Gene Symbol: BRAF (ENSG00000157764)
Fold Change: 2.34
Ensembl ID: ENSG00000157764 - Gene Symbol: LRBA (ENSG00000198589)
Fold Change: 2.34
Ensembl ID: ENSG00000198589 - Gene Symbol: GRIK1 (ENSG00000171189)
Fold Change: 2.33
Ensembl ID: ENSG00000171189 - Gene Symbol: CDH9 (ENSG00000113100)
Fold Change: 2.33
Ensembl ID: ENSG00000113100 - Gene Symbol: GNAS (ENSG00000087460)
Fold Change: 2.33
Ensembl ID: ENSG00000087460 - Gene Symbol: BMPR2 (ENSG00000204217)
Fold Change: 2.32
Ensembl ID: ENSG00000204217 - Gene Symbol: GSK3B (ENSG00000082701)
Fold Change: 2.3
Ensembl ID: ENSG00000082701 - Gene Symbol: APBB2 (ENSG00000163697)
Fold Change: 2.3
Ensembl ID: ENSG00000163697 - Gene Symbol: CUX1 (ENSG00000257923)
Fold Change: 2.3
Ensembl ID: ENSG00000257923 - Gene Symbol: APBA2 (ENSG00000034053)
Fold Change: 2.29
Ensembl ID: ENSG00000034053 - Gene Symbol: GLS (ENSG00000115419)
Fold Change: 2.29
Ensembl ID: ENSG00000115419 - Gene Symbol: COL4A2 (ENSG00000134871)
Fold Change: 2.28
Ensembl ID: ENSG00000134871 - Gene Symbol: HIVEP2 (ENSG00000010818)
Fold Change: 2.27
Ensembl ID: ENSG00000010818 - Gene Symbol: IGF1R (ENSG00000140443)
Fold Change: 2.27
Ensembl ID: ENSG00000140443 - Gene Symbol: ARHGAP35 (ENSG00000160007)
Fold Change: 2.26
Ensembl ID: ENSG00000160007 - Gene Symbol: FHIT (ENSG00000189283)
Fold Change: 2.26
Ensembl ID: ENSG00000189283 - Gene Symbol: ACYP2 (ENSG00000170634)
Fold Change: 2.25
Ensembl ID: ENSG00000170634 - Gene Symbol: BRINP1 (ENSG00000078725)
Fold Change: 2.25
Ensembl ID: ENSG00000078725 - Gene Symbol: GUCY1A2 (ENSG00000152402)
Fold Change: 2.25
Ensembl ID: ENSG00000152402 - Gene Symbol: ENSA (ENSG00000143420)
Fold Change: 2.24
Ensembl ID: ENSG00000143420 - Gene Symbol: CDR2 (ENSG00000140743)
Fold Change: 2.24
Ensembl ID: ENSG00000140743 - Gene Symbol: ABR (ENSG00000159842)
Fold Change: 2.24
Ensembl ID: ENSG00000159842 - Gene Symbol: BPTF (ENSG00000171634)
Fold Change: 2.24
Ensembl ID: ENSG00000171634 - Gene Symbol: ATP2B1 (ENSG00000070961)
Fold Change: 2.24
Ensembl ID: ENSG00000070961
Symbol: Shortened abbreviation or name that represents this gene.
Ensembl Gene ID: A unique identifier assigned by Ensembl for genomic data mapping.
Fold Change: Indicates the ratio of the gene's expression level in chandelier pvalb GABAergic cortical interneuron cell compared to a baseline. A fold change greater than 1 suggests significant gene expression.
Symbol: Shortened abbreviation or name that represents this gene.
Ensembl Gene ID: A unique identifier assigned by Ensembl for genomic data mapping.
Fold Change: Indicates the ratio of the gene's expression level in chandelier pvalb GABAergic cortical interneuron cell compared to a baseline. A fold change greater than 1 suggests significant gene expression.