Details for: CL4030028

Cell ID: CL4030028

Cell Name: glycinergic amacrine cell

Marker Score Threshold: 943
(Derived using integrated single-cell and genomic data)

Description: An amacrine cell that uses glycine as a neurotransmitter.

Synonyms: amacrine cell, glycinergic

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: ALDOA (ENSG00000149925)
    Fold Change: 4.23
    Ensembl ID: ENSG00000149925
  • Gene Symbol: CALM2 (ENSG00000143933)
    Fold Change: 4.15
    Ensembl ID: ENSG00000143933
  • Gene Symbol: ACTB (ENSG00000075624)
    Fold Change: 4
    Ensembl ID: ENSG00000075624
  • Gene Symbol: ATP1B1 (ENSG00000143153)
    Fold Change: 3.98
    Ensembl ID: ENSG00000143153
  • Gene Symbol: BTG1 (ENSG00000133639)
    Fold Change: 3.98
    Ensembl ID: ENSG00000133639
  • Gene Symbol: ACTG1 (ENSG00000184009)
    Fold Change: 3.97
    Ensembl ID: ENSG00000184009
  • Gene Symbol: CALM1 (ENSG00000198668)
    Fold Change: 3.92
    Ensembl ID: ENSG00000198668
  • Gene Symbol: CALM3 (ENSG00000160014)
    Fold Change: 3.47
    Ensembl ID: ENSG00000160014
  • Gene Symbol: ATP5F1E (ENSG00000124172)
    Fold Change: 3.45
    Ensembl ID: ENSG00000124172
  • Gene Symbol: SLC25A6 (ENSG00000169100)
    Fold Change: 3.41
    Ensembl ID: ENSG00000169100
  • Gene Symbol: ATP5MC2 (ENSG00000135390)
    Fold Change: 3.37
    Ensembl ID: ENSG00000135390
  • Gene Symbol: ALDOC (ENSG00000109107)
    Fold Change: 3.29
    Ensembl ID: ENSG00000109107
  • Gene Symbol: BNIP3 (ENSG00000176171)
    Fold Change: 3.24
    Ensembl ID: ENSG00000176171
  • Gene Symbol: ATP5F1B (ENSG00000110955)
    Fold Change: 3.14
    Ensembl ID: ENSG00000110955
  • Gene Symbol: ATP6V1G2 (ENSG00000213760)
    Fold Change: 3.14
    Ensembl ID: ENSG00000213760
  • Gene Symbol: BTF3 (ENSG00000145741)
    Fold Change: 3.12
    Ensembl ID: ENSG00000145741
  • Gene Symbol: BNIP3L (ENSG00000104765)
    Fold Change: 3.1
    Ensembl ID: ENSG00000104765
  • Gene Symbol: ATP5MC3 (ENSG00000154518)
    Fold Change: 3.08
    Ensembl ID: ENSG00000154518
  • Gene Symbol: ATP5F1A (ENSG00000152234)
    Fold Change: 3.07
    Ensembl ID: ENSG00000152234
  • Gene Symbol: ATP5PF (ENSG00000154723)
    Fold Change: 3.03
    Ensembl ID: ENSG00000154723
  • Gene Symbol: ATP1A3 (ENSG00000105409)
    Fold Change: 2.99
    Ensembl ID: ENSG00000105409
  • Gene Symbol: ATP6V0B (ENSG00000117410)
    Fold Change: 2.99
    Ensembl ID: ENSG00000117410
  • Gene Symbol: APP (ENSG00000142192)
    Fold Change: 2.94
    Ensembl ID: ENSG00000142192
  • Gene Symbol: ATP5F1D (ENSG00000099624)
    Fold Change: 2.87
    Ensembl ID: ENSG00000099624
  • Gene Symbol: SLC25A4 (ENSG00000151729)
    Fold Change: 2.85
    Ensembl ID: ENSG00000151729
  • Gene Symbol: BSG (ENSG00000172270)
    Fold Change: 2.84
    Ensembl ID: ENSG00000172270
  • Gene Symbol: ATP5ME (ENSG00000169020)
    Fold Change: 2.75
    Ensembl ID: ENSG00000169020
  • Gene Symbol: ATP5PO (ENSG00000241837)
    Fold Change: 2.63
    Ensembl ID: ENSG00000241837
  • Gene Symbol: ATP1A1 (ENSG00000163399)
    Fold Change: 2.61
    Ensembl ID: ENSG00000163399
  • Gene Symbol: APLP2 (ENSG00000084234)
    Fold Change: 2.61
    Ensembl ID: ENSG00000084234
  • Gene Symbol: CALB2 (ENSG00000172137)
    Fold Change: 2.41
    Ensembl ID: ENSG00000172137
  • Gene Symbol: ARF1 (ENSG00000143761)
    Fold Change: 2.37
    Ensembl ID: ENSG00000143761
  • Gene Symbol: ATP6V1B2 (ENSG00000147416)
    Fold Change: 2.33
    Ensembl ID: ENSG00000147416
  • Gene Symbol: ASPH (ENSG00000198363)
    Fold Change: 2.31
    Ensembl ID: ENSG00000198363
  • Gene Symbol: KIF1A (ENSG00000130294)
    Fold Change: 2.19
    Ensembl ID: ENSG00000130294
  • Gene Symbol: CALR (ENSG00000179218)
    Fold Change: 2.12
    Ensembl ID: ENSG00000179218
  • Gene Symbol: B2M (ENSG00000166710)
    Fold Change: 2.09
    Ensembl ID: ENSG00000166710
  • Gene Symbol: APLP1 (ENSG00000105290)
    Fold Change: 2.07
    Ensembl ID: ENSG00000105290
  • Gene Symbol: ARL2 (ENSG00000213465)
    Fold Change: 2.06
    Ensembl ID: ENSG00000213465
  • Gene Symbol: ATRX (ENSG00000085224)
    Fold Change: 1.95
    Ensembl ID: ENSG00000085224
  • Gene Symbol: ATP5F1C (ENSG00000165629)
    Fold Change: 1.93
    Ensembl ID: ENSG00000165629
  • Gene Symbol: ATP6V1E1 (ENSG00000131100)
    Fold Change: 1.92
    Ensembl ID: ENSG00000131100
  • Gene Symbol: ASAH1 (ENSG00000104763)
    Fold Change: 1.89
    Ensembl ID: ENSG00000104763
  • Gene Symbol: SLC25A5 (ENSG00000005022)
    Fold Change: 1.89
    Ensembl ID: ENSG00000005022
  • Gene Symbol: ATP5PB (ENSG00000116459)
    Fold Change: 1.85
    Ensembl ID: ENSG00000116459
  • Gene Symbol: ATF4 (ENSG00000128272)
    Fold Change: 1.84
    Ensembl ID: ENSG00000128272
  • Gene Symbol: ATP6AP1 (ENSG00000071553)
    Fold Change: 1.78
    Ensembl ID: ENSG00000071553
  • Gene Symbol: ATP5MC1 (ENSG00000159199)
    Fold Change: 1.75
    Ensembl ID: ENSG00000159199
  • Gene Symbol: ARL3 (ENSG00000138175)
    Fold Change: 1.74
    Ensembl ID: ENSG00000138175
  • Gene Symbol: TMEM258 (ENSG00000134825)
    Fold Change: 1.66
    Ensembl ID: ENSG00000134825
  • Gene Symbol: RHOA (ENSG00000067560)
    Fold Change: 1.65
    Ensembl ID: ENSG00000067560
  • Gene Symbol: AKR1B1 (ENSG00000085662)
    Fold Change: 1.65
    Ensembl ID: ENSG00000085662
  • Gene Symbol: ANK3 (ENSG00000151150)
    Fold Change: 1.65
    Ensembl ID: ENSG00000151150
  • Gene Symbol: DST (ENSG00000151914)
    Fold Change: 1.63
    Ensembl ID: ENSG00000151914
  • Gene Symbol: APBB1 (ENSG00000166313)
    Fold Change: 1.6
    Ensembl ID: ENSG00000166313
  • Gene Symbol: ACP1 (ENSG00000143727)
    Fold Change: 1.58
    Ensembl ID: ENSG00000143727
  • Gene Symbol: CA11 (ENSG00000063180)
    Fold Change: 1.57
    Ensembl ID: ENSG00000063180
  • Gene Symbol: ATP6V0A1 (ENSG00000033627)
    Fold Change: 1.55
    Ensembl ID: ENSG00000033627
  • Gene Symbol: ACTC1 (ENSG00000159251)
    Fold Change: 1.53
    Ensembl ID: ENSG00000159251
  • Gene Symbol: ACYP1 (ENSG00000119640)
    Fold Change: 1.5
    Ensembl ID: ENSG00000119640
  • Gene Symbol: ATP2B1 (ENSG00000070961)
    Fold Change: 1.48
    Ensembl ID: ENSG00000070961
  • Gene Symbol: APOE (ENSG00000130203)
    Fold Change: 1.46
    Ensembl ID: ENSG00000130203
  • Gene Symbol: AK4 (ENSG00000162433)
    Fold Change: 1.45
    Ensembl ID: ENSG00000162433
  • Gene Symbol: AMD1 (ENSG00000123505)
    Fold Change: 1.42
    Ensembl ID: ENSG00000123505
  • Gene Symbol: C1QBP (ENSG00000108561)
    Fold Change: 1.42
    Ensembl ID: ENSG00000108561
  • Gene Symbol: RERE (ENSG00000142599)
    Fold Change: 1.39
    Ensembl ID: ENSG00000142599
  • Gene Symbol: AK1 (ENSG00000106992)
    Fold Change: 1.39
    Ensembl ID: ENSG00000106992
  • Gene Symbol: CALB1 (ENSG00000104327)
    Fold Change: 1.35
    Ensembl ID: ENSG00000104327
  • Gene Symbol: AMPD2 (ENSG00000116337)
    Fold Change: 1.34
    Ensembl ID: ENSG00000116337
  • Gene Symbol: ATOX1 (ENSG00000177556)
    Fold Change: 1.33
    Ensembl ID: ENSG00000177556
  • Gene Symbol: ARF5 (ENSG00000004059)
    Fold Change: 1.28
    Ensembl ID: ENSG00000004059
  • Gene Symbol: ARRB2 (ENSG00000141480)
    Fold Change: 1.27
    Ensembl ID: ENSG00000141480
  • Gene Symbol: BAG1 (ENSG00000107262)
    Fold Change: 1.27
    Ensembl ID: ENSG00000107262
  • Gene Symbol: TLE5 (ENSG00000104964)
    Fold Change: 1.26
    Ensembl ID: ENSG00000104964
  • Gene Symbol: ARF4 (ENSG00000168374)
    Fold Change: 1.25
    Ensembl ID: ENSG00000168374
  • Gene Symbol: AAMP (ENSG00000127837)
    Fold Change: 1.23
    Ensembl ID: ENSG00000127837
  • Gene Symbol: AP2B1 (ENSG00000006125)
    Fold Change: 1.21
    Ensembl ID: ENSG00000006125
  • Gene Symbol: ASGR1 (ENSG00000141505)
    Fold Change: 1.21
    Ensembl ID: ENSG00000141505
  • Gene Symbol: BLVRB (ENSG00000090013)
    Fold Change: 1.21
    Ensembl ID: ENSG00000090013
  • Gene Symbol: BAD (ENSG00000002330)
    Fold Change: 1.19
    Ensembl ID: ENSG00000002330
  • Gene Symbol: ATP1B2 (ENSG00000129244)
    Fold Change: 1.19
    Ensembl ID: ENSG00000129244
  • Gene Symbol: ACO2 (ENSG00000100412)
    Fold Change: 1.18
    Ensembl ID: ENSG00000100412
  • Gene Symbol: BIN1 (ENSG00000136717)
    Fold Change: 1.17
    Ensembl ID: ENSG00000136717
  • Gene Symbol: RHOB (ENSG00000143878)
    Fold Change: 1.16
    Ensembl ID: ENSG00000143878
  • Gene Symbol: BCL7A (ENSG00000110987)
    Fold Change: 1.14
    Ensembl ID: ENSG00000110987
  • Gene Symbol: ATP6V1A (ENSG00000114573)
    Fold Change: 1.13
    Ensembl ID: ENSG00000114573
  • Gene Symbol: ACHE (ENSG00000087085)
    Fold Change: 1.13
    Ensembl ID: ENSG00000087085
  • Gene Symbol: ARF3 (ENSG00000134287)
    Fold Change: 1.12
    Ensembl ID: ENSG00000134287
  • Gene Symbol: AMPH (ENSG00000078053)
    Fold Change: 1.12
    Ensembl ID: ENSG00000078053
  • Gene Symbol: GET3 (ENSG00000198356)
    Fold Change: 1.11
    Ensembl ID: ENSG00000198356
  • Gene Symbol: CAMK4 (ENSG00000152495)
    Fold Change: 1.09
    Ensembl ID: ENSG00000152495
  • Gene Symbol: ARHGDIA (ENSG00000141522)
    Fold Change: 1.08
    Ensembl ID: ENSG00000141522
  • Gene Symbol: ADAR (ENSG00000160710)
    Fold Change: 1.08
    Ensembl ID: ENSG00000160710
  • Gene Symbol: ACADVL (ENSG00000072778)
    Fold Change: 1.08
    Ensembl ID: ENSG00000072778
  • Gene Symbol: ARL4D (ENSG00000175906)
    Fold Change: 1.07
    Ensembl ID: ENSG00000175906
  • Gene Symbol: TMEM50B (ENSG00000142188)
    Fold Change: 1.04
    Ensembl ID: ENSG00000142188
  • Gene Symbol: ATP1B3 (ENSG00000069849)
    Fold Change: 1.03
    Ensembl ID: ENSG00000069849
  • Gene Symbol: CA9 (ENSG00000107159)
    Fold Change: 1.03
    Ensembl ID: ENSG00000107159
  • Gene Symbol: APEX1 (ENSG00000100823)
    Fold Change: 1.02
    Ensembl ID: ENSG00000100823
  • Gene Symbol: PARP1 (ENSG00000143799)
    Fold Change: 1.01
    Ensembl ID: ENSG00000143799
Hovered Details

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Hovered Details

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**Key Characteristics** Glycinergic amacrine cells are a subtype of amacrine cells, which are inhibitory interneurons that play a crucial role in the retina. These cells are characterized by their use of glycine as a neurotransmitter, which is distinct from other types of amacrine cells that use glutamate or aspartate. Glycinergic amacrine cells are also known for their unique morphology, which includes a characteristic "star-shaped" dendritic pattern and a single axon that projects to the inner plexiform layer. **Clinical Significance** Glycinergic amacrine cells are implicated in various neurological disorders, including: 1. **Epilepsy**: Glycinergic amacrine cells have been shown to play a role in the development of epilepsy, particularly in the context of absence seizures. 2. **Alzheimer's disease**: Glycinergic amacrine cells have been found to be reduced in number in individuals with Alzheimer's disease, which may contribute to the development of cognitive impairments. 3. **Visual perception**: Glycinergic amacrine cells are involved in the regulation of visual perception, particularly in the context of motion detection and the processing of complex visual stimuli. 4. **Neurodegenerative diseases**: Glycinergic amacrine cells have been implicated in various neurodegenerative diseases, including Parkinson's disease and Huntington's disease. **Pathways/Ontology** Glycinergic amacrine cells are associated with a wide range of pathways and ontologies, including: 1. **Adenylate cyclase activator activity**: Glycinergic amacrine cells are involved in the regulation of adenylate cyclase activity, which is crucial for the production of cyclic AMP (cAMP). 2. **Actin binding**: Glycinergic amacrine cells are associated with actin binding, which is involved in the regulation of cell shape and movement. 3. **Cytoskeletal protein binding**: Glycinergic amacrine cells are involved in the regulation of cytoskeletal protein binding, which is crucial for the maintenance of cell structure and function. 4. **Gluconeogenesis**: Glycinergic amacrine cells are implicated in the regulation of gluconeogenesis, which is the production of glucose from non-carbohydrate sources. 5. **Immunological responses**: Glycinergic amacrine cells are involved in the regulation of immunological responses, particularly in the context of the innate immune system. In conclusion, glycinergic amacrine cells are a complex and multifunctional type of interneuron that play a crucial role in the processing and transmission of visual information. Their involvement in various neurological disorders and their association with a wide range of pathways and ontologies make them an important area of research in the field of neuroscience.