Details for: CHAF1A
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: oogonial cell (CL0000024)
Fold Change: 1.51
Marker Score: 2,175 - Cell Name: proerythroblast (CL0000547)
Fold Change: 1.37
Marker Score: 930 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 1.18
Marker Score: 2,407 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 1.08
Marker Score: 2,053 - Cell Name: migratory enteric neural crest cell (CL0002607)
Fold Change: 1.06
Marker Score: 993 - Cell Name: large pre-B-II cell (CL0000957)
Fold Change: 1.01
Marker Score: 2,753 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71,778 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 48,003 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.98
Marker Score: 15,389 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30,403 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2,405 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.94
Marker Score: 486 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.94
Marker Score: 302 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.94
Marker Score: 442 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.91
Marker Score: 2,721 - Cell Name: neural crest cell (CL0011012)
Fold Change: 0.89
Marker Score: 952 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 0.88
Marker Score: 659 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.88
Marker Score: 5,006 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5,295 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.86
Marker Score: 311 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.81
Marker Score: 487 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 0.79
Marker Score: 995 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 0.79
Marker Score: 791 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.78
Marker Score: 1,264 - Cell Name: plasmablast (CL0000980)
Fold Change: 0.75
Marker Score: 997 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.74
Marker Score: 295 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.73
Marker Score: 561 - Cell Name: oocyte (CL0000023)
Fold Change: 0.73
Marker Score: 181 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.73
Marker Score: 379 - Cell Name: pro-T cell (CL0000827)
Fold Change: 0.73
Marker Score: 2,974 - Cell Name: plasmacytoid dendritic cell, human (CL0001058)
Fold Change: 0.7
Marker Score: 183 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 0.69
Marker Score: 1,179 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.69
Marker Score: 2,050 - Cell Name: brush cell (CL0002204)
Fold Change: 0.68
Marker Score: 625 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.68
Marker Score: 1,596 - Cell Name: kidney capillary endothelial cell (CL1000892)
Fold Change: 0.67
Marker Score: 211 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.67
Marker Score: 2,810 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.66
Marker Score: 2,607 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.66
Marker Score: 169 - Cell Name: male germ cell (CL0000015)
Fold Change: 0.62
Marker Score: 178 - Cell Name: Unknown (CL0000548)
Fold Change: 0.61
Marker Score: 446 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 0.61
Marker Score: 2,350 - Cell Name: late promyelocyte (CL0002151)
Fold Change: 0.59
Marker Score: 149 - Cell Name: mesangial cell (CL0000650)
Fold Change: 0.59
Marker Score: 708 - Cell Name: cerebellar granule cell precursor (CL0002362)
Fold Change: 0.58
Marker Score: 326 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 0.58
Marker Score: 1,201 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.57
Marker Score: 842 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.57
Marker Score: 236 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.56
Marker Score: 265 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.55
Marker Score: 440 - Cell Name: IgG plasmablast (CL0000982)
Fold Change: 0.55
Marker Score: 152 - Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
Fold Change: 0.54
Marker Score: 339 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 0.53
Marker Score: 140 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.52
Marker Score: 333 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 0.51
Marker Score: 4,354 - Cell Name: erythroblast (CL0000765)
Fold Change: 0.48
Marker Score: 297 - Cell Name: taste receptor cell (CL0000209)
Fold Change: 0.47
Marker Score: 404 - Cell Name: mesodermal cell (CL0000222)
Fold Change: 0.47
Marker Score: 6,158 - Cell Name: promyelocyte (CL0000836)
Fold Change: 0.47
Marker Score: 230 - Cell Name: enteric smooth muscle cell (CL0002504)
Fold Change: 0.46
Marker Score: 1,093 - Cell Name: ovarian surface epithelial cell (CL2000064)
Fold Change: 0.46
Marker Score: 1,254 - Cell Name: common lymphoid progenitor (CL0000051)
Fold Change: 0.45
Marker Score: 309 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.45
Marker Score: 27,634 - Cell Name: neuronal receptor cell (CL0000006)
Fold Change: 0.45
Marker Score: 198 - Cell Name: erythroid progenitor cell (CL0000038)
Fold Change: 0.44
Marker Score: 464 - Cell Name: osteoclast (CL0000092)
Fold Change: 0.44
Marker Score: 220 - Cell Name: granulocyte monocyte progenitor cell (CL0000557)
Fold Change: 0.44
Marker Score: 280 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.43
Marker Score: 284 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: 0.42
Marker Score: 416 - Cell Name: nasal mucosa goblet cell (CL0002480)
Fold Change: 0.42
Marker Score: 281 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 0.42
Marker Score: 6,238 - Cell Name: stem cell (CL0000034)
Fold Change: 0.42
Marker Score: 986 - Cell Name: pre-conventional dendritic cell (CL0002010)
Fold Change: 0.41
Marker Score: 122 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 0.41
Marker Score: 3,912 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: 0.41
Marker Score: 328 - Cell Name: connective tissue cell (CL0002320)
Fold Change: 0.41
Marker Score: 106 - Cell Name: neural cell (CL0002319)
Fold Change: 0.41
Marker Score: 196 - Cell Name: exhausted T cell (CL0011025)
Fold Change: 0.4
Marker Score: 230 - Cell Name: myeloid cell (CL0000763)
Fold Change: 0.39
Marker Score: 633 - Cell Name: type EC enteroendocrine cell (CL0000577)
Fold Change: 0.39
Marker Score: 363 - Cell Name: mature B cell (CL0000785)
Fold Change: 0.38
Marker Score: 281 - Cell Name: kidney interstitial cell (CL1000500)
Fold Change: 0.38
Marker Score: 272 - Cell Name: early lymphoid progenitor (CL0000936)
Fold Change: 0.38
Marker Score: 187 - Cell Name: conventional dendritic cell (CL0000990)
Fold Change: 0.38
Marker Score: 259 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 0.37
Marker Score: 333 - Cell Name: plasmacytoid dendritic cell (CL0000784)
Fold Change: 0.37
Marker Score: 200 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 0.35
Marker Score: 324 - Cell Name: thymocyte (CL0000893)
Fold Change: 0.35
Marker Score: 369 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.35
Marker Score: 399 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 0.35
Marker Score: 543 - Cell Name: dendritic cell (CL0000451)
Fold Change: 0.35
Marker Score: 241 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.35
Marker Score: 161 - Cell Name: megakaryocyte progenitor cell (CL0000553)
Fold Change: 0.35
Marker Score: 97 - Cell Name: fetal cardiomyocyte (CL0002495)
Fold Change: 0.35
Marker Score: 114 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 0.34
Marker Score: 144 - Cell Name: glial cell (CL0000125)
Fold Change: 0.34
Marker Score: 378 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.34
Marker Score: 2,063 - Cell Name: basal cell of epithelium of trachea (CL1000348)
Fold Change: 0.34
Marker Score: 2,548 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 0.34
Marker Score: 2,621 - Cell Name: B cell (CL0000236)
Fold Change: 0.34
Marker Score: 325
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3926663281
Symbol: CAF1A_HUMAN
Name: Chromatin assembly factor I p150 subunit
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11250073
Title: Genomic sequence and expression analyses of human chromatin assembly factor 1 p150 gene.
PubMed ID: 11250073
PubMed ID: 15057824
Title: The DNA sequence and biology of human chromosome 19.
PubMed ID: 15057824
DOI: 10.1038/nature02399
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 7600578
Title: The p150 and p60 subunits of chromatin assembly factor I: a molecular link between newly synthesized histones and DNA replication.
PubMed ID: 7600578
PubMed ID: 10052459
Title: Replication-dependent marking of DNA by PCNA facilitates CAF-1-coupled inheritance of chromatin.
PubMed ID: 10052459
PubMed ID: 10648606
Title: A CAF-1-PCNA-mediated chromatin assembly pathway triggered by sensing DNA damage.
PubMed ID: 10648606
PubMed ID: 10893180
Title: CAF-1 and the inheritance of chromatin states: at the crossroads of DNA replication and repair.
PubMed ID: 10893180
PubMed ID: 11296234
Title: Dimerization of the largest subunit of chromatin assembly factor 1: importance in vitro and during Xenopus early development.
PubMed ID: 11296234
PubMed ID: 12697822
Title: The methyl-CpG binding protein MBD1 interacts with the p150 subunit of chromatin assembly factor 1.
PubMed ID: 12697822
PubMed ID: 15327775
Title: Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly.
PubMed ID: 15327775
PubMed ID: 30849389
Title: Retraction Notice to: Methyl-CpG Binding Protein MBD1 Couples Histone H3 Methylation at Lysine 9 by SETDB1 to DNA Replication and Chromatin Assembly.
PubMed ID: 30849389
PubMed ID: 15882967
Title: The mammalian heterochromatin protein 1 binds diverse nuclear proteins through a common motif that targets the chromoshadow domain.
PubMed ID: 15882967
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 18220336
Title: Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis.
PubMed ID: 18220336
DOI: 10.1021/pr0705441
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 20562864
Title: Human POGZ modulates dissociation of HP1alpha from mitotic chromosome arms through Aurora B activation.
PubMed ID: 20562864
DOI: 10.1038/ncb2075
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 25218447
Title: Uncovering global SUMOylation signaling networks in a site-specific manner.
PubMed ID: 25218447
DOI: 10.1038/nsmb.2890
PubMed ID: 25114211
Title: Mapping of SUMO sites and analysis of SUMOylation changes induced by external stimuli.
PubMed ID: 25114211
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 33857403
Title: DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network.
PubMed ID: 33857403
Sequence Information:
- Length: 956
- Mass: 106910
- Checksum: 90617F8FE8DB7FD0
- Sequence:
MLEELECGAP GARGAATAMD CKDRPAFPVK KLIQARLPFK RLNLVPKGKA DDMSDDQGTS VQSKSPDLEA SLDTLENNCH VGSDIDFRPK LVNGKGPLDN FLRNRIETSI GQSTVIIDLT EDSNEQPDSL VDHNKLNSEA SPSREAINGQ REDTGDQQGL LKAIQNDKLA FPGETLSDIP CKTEEEGVGC GGAGRRGDSQ ECSPRSCPEL TSGPRMCPRK EQDSWSEAGG ILFKGKVPMV VLQDILAVRP PQIKSLPATP QGKNMTPESE VLESFPEEDS VLSHSSLSSP SSTSSPEGPP APPKQHSSTS PFPTSTPLRR ITKKFVKGST EKNKLRLQRD QERLGKQLKL RAEREEKEKL KEEAKRAKEE AKKKKEEEKE LKEKERREKR EKDEKEKAEK QRLKEERRKE RQEALEAKLE EKRKKEEEKR LREEEKRIKA EKAEITRFFQ KPKTPQAPKT LAGSCGKFAP FEIKEHMVLA PRRRTAFHPD LCSQLDQLLQ QQSGEFSFLK DLKGRQPLRS GPTHVSTRNA DIFNSDVVIV ERGKGDGVPE RRKFGRMKLL QFCENHRPAY WGTWNKKTAL IRARDPWAQD TKLLDYEVDS DEEWEEEEPG ESLSHSEGDD DDDMGEDEDE DDGFFVPHGY LSEDEGVTEE CADPENHKVR QKLKAKEWDE FLAKGKRFRV LQPVKIGCVW AADRDCAGDD LKVLQQFAAC FLETLPAQEE QTPKASKRER RDEQILAQLL PLLHGNVNGS KVIIREFQEH CRRGLLSNHT GSPRSPSTTY LHTPTPSEDA AIPSKSRLKR LISENSVYEK RPDFRMCWYV HPQVLQSFQQ EHLPVPCQWS YVTSVPSAPK EDSGSVPSTG PSQGTPISLK RKSAGSMCIT QFMKKRRHDG QIGAEDMDGF QADTEEEEEE EGDCMIVDVP DAAEVQAPCG AASGAGGGVG VDTGKATLTA SPLGAS
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.