Details for: CDH13
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 41.89rCSI 54%PRS 86.08
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CSI 41.58rCSI 49.67%PRS 85.13
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CSI 37.3rCSI 46.4%PRS 83.05
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CSI 35.36rCSI 50.74%PRS 87.95
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CSI 28.81rCSI 48.36%PRS 85.25
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CSI 27.1rCSI 47.87%PRS 84.61
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CSI 23.52rCSI 42.74%PRS 89.69
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CSI 20.7rCSI 44.91%PRS 85.16
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CSI 16.05rCSI 35.32%PRS 79.59
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CSI 13.69rCSI 45%PRS 85.23
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CSI 13.59rCSI 43.74%PRS 91.17
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CSI 13.24rCSI 32.17%PRS 83.19
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CSI 13.16rCSI 20.99%PRS 88.42
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CSI 13.08rCSI 47.06%PRS 83.49
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CSI 12.6rCSI 47.62%PRS 85.31
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CSI 11.23rCSI 18.06%PRS 85.99
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CSI 11.17rCSI 19.59%PRS 92.12
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CSI 10.84rCSI 44.15%PRS 88.43
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CSI 10.33rCSI 11.95%PRS 90.09
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CSI 10.17rCSI 11.13%PRS 95.5
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CSI 9.86rCSI 18.06%PRS 93.5
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CSI 9.53rCSI 19.77%PRS 92.95
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CSI 9.38rCSI 13.79%PRS 90.55
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CSI 9.07rCSI 34.22%PRS 82.85
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CSI 8.87rCSI 11.38%PRS 87.85
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CSI 8.78rCSI 18.05%PRS 84.79
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CSI 8.67rCSI 54.18%PRS 89.33
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CSI 8.63rCSI 8.03%PRS 95.33
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CSI 8.48rCSI 19.57%PRS 87.54
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CSI 8.21rCSI 19.64%PRS 86.34
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CSI 7.95rCSI 39.19%PRS 96.09
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CSI 7.93rCSI 15.92%PRS 90.05
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CSI 7.63rCSI 25.57%PRS 83.66
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CSI 7.42rCSI 11.85%PRS 95.71
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CSI 7.15rCSI 8.58%PRS 93.61
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CSI 7.14rCSI 18.06%PRS 95.6
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CSI 7.11rCSI 10.15%PRS 94.2
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CSI 7.07rCSI 22.94%PRS 93.02
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CSI 7.02rCSI 24.05%PRS 84.09
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CSI 6.62rCSI 5.71%PRS 93.76
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CSI 6.41rCSI 14.36%PRS 85.4
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CSI 6.17rCSI 12.53%PRS 79.96
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CSI 6.15rCSI 8.41%PRS 88.58
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CSI 6.13rCSI 16.88%PRS 92.9
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CSI 6.03rCSI 4.77%PRS 89.52
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CSI 5.97rCSI 14.24%PRS 89.93
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CSI 5.92rCSI 9.02%PRS 91.78
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CSI 5.91rCSI 41.81%PRS 89.59
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CSI 5.71rCSI 16.23%PRS 91.38
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CSI 5.69rCSI 21.32%PRS 91.54
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CSI 5.68rCSI 27.19%PRS 91.53
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CSI 5.58rCSI 17.86%PRS 93.36
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CSI 5.53rCSI 16.32%PRS 94.3
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CSI 5.41rCSI 7.23%PRS 91.86
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CSI 5.35rCSI 26.59%PRS 89.88
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CSI 5.28rCSI 25.28%PRS 95.06
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CSI 5.24rCSI 21.13%PRS 94.82
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CSI 5.21rCSI 15.1%PRS 87.9
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CSI 4.68rCSI 13.38%PRS 94.88
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CSI 4.61rCSI 6.28%PRS 89.31
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CSI 4.23rCSI 18.91%PRS 82.26
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CSI 4.18rCSI 3.09%PRS 92.05
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CSI 4.07rCSI 3.41%PRS 93.88
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CSI 4.05rCSI 6.19%PRS 93.29
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CSI 4.02rCSI 15.72%PRS 88.28
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CSI 3.68rCSI 20.09%PRS 90.97
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CSI 3.63rCSI 20.51%PRS 85.98
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CSI 3.6rCSI 6.34%PRS 96.06
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CSI 3.47rCSI 10.04%PRS 93.69
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CSI 3.46rCSI 20.39%PRS 85.51
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CSI 3.17rCSI 8.9%PRS 91.37
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CSI 3.09rCSI 5.34%PRS 90.74
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CSI 2.97rCSI 9.16%PRS 94.99
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CSI 2.85rCSI 20.93%PRS 88.52
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CSI 2.71rCSI 6.87%PRS 90.94
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CSI 2.69rCSI 8.75%PRS 92.14
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CSI 2.62rCSI 22.08%PRS 82.55
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CSI 2.57rCSI 11.3%PRS 85.33
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CSI 2.51rCSI 3.99%PRS 91.03
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CSI 2.3rCSI 3.63%PRS 95.04
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CSI 2.07rCSI 9.25%PRS 97.77
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CSI 2.07rCSI 6.48%PRS 86.14
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CSI 1.89rCSI 7.71%PRS 97.39
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CSI 1.82rCSI 5.32%PRS 97.16
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CSI 1.79rCSI 19.48%PRS 92.31
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CSI 1.66rCSI 8.71%PRS 94.2
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CSI 1.47rCSI 3.93%PRS 90.72
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CSI 1.2rCSI 8.77%PRS 97.29
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CSI 1.18rCSI 2.61%PRS 86.52
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CSI 0.91rCSI 7.4%PRS 93.17
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CSI 0.77rCSI 2.42%PRS 87.75
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 1950201510
Symbol: CAD13_HUMAN
Name: Cadherin-13
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7982033
Title: Cloning of five human cadherins clarifies characteristic features of cadherin extracellular domain and provides further evidence for two structurally different types of cadherin.
PubMed ID: 7982033
PubMed ID: 8673923
Title: H-cadherin, a novel cadherin with growth inhibitory functions and diminished expression in human breast cancer.
PubMed ID: 8673923
DOI: 10.1038/nm0796-776
PubMed ID: 9737784
Title: The H-cadherin (CDH13) gene is inactivated in human lung cancer.
PubMed ID: 9737784
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15616553
Title: The sequence and analysis of duplication-rich human chromosome 16.
PubMed ID: 15616553
DOI: 10.1038/nature03187
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9468307
Title: Identification of an atypical lipoprotein-binding protein from human aortic smooth muscle as T-cadherin.
PubMed ID: 9468307
PubMed ID: 10737605
Title: Expression of T-cadherin (CDH13, H-Cadherin) in human brain and its characteristics as a negative growth regulator of epidermal growth factor in neuroblastoma cells.
PubMed ID: 10737605
PubMed ID: 11027617
Title: The glycosyl phosphatidylinositol anchor of human T-cadherin binds lipoproteins.
PubMed ID: 11027617
PubMed ID: 16335952
Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.
PubMed ID: 16335952
DOI: 10.1021/pr0502065
PubMed ID: 17566972
Title: Computational approach for identification and characterization of GPI-anchored peptides in proteomics experiments.
PubMed ID: 17566972
PubMed ID: 19159218
Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.
PubMed ID: 19159218
DOI: 10.1021/pr8008012
PubMed ID: 21220648
Title: Resequencing of 29 candidate genes in patients with familial and sporadic amyotrophic lateral sclerosis.
PubMed ID: 21220648
Sequence Information:
- Length: 713
- Mass: 78287
- Checksum: CEB662D77824CB60
- Sequence:
MQPRTPLVLC VLLSQVLLLT SAEDLDCTPG FQQKVFHINQ PAEFIEDQSI LNLTFSDCKG NDKLRYEVSS PYFKVNSDGG LVALRNITAV GKTLFVHART PHAEDMAELV IVGGKDIQGS LQDIFKFART SPVPRQKRSI VVSPILIPEN QRQPFPRDVG KVVDSDRPER SKFRLTGKGV DQEPKGIFRI NENTGSVSVT RTLDREVIAV YQLFVETTDV NGKTLEGPVP LEVIVIDQND NRPIFREGPY IGHVMEGSPT GTTVMRMTAF DADDPATDNA LLRYNIRQQT PDKPSPNMFY IDPEKGDIVT VVSPALLDRE TLENPKYELI IEAQDMAGLD VGLTGTATAT IMIDDKNDHS PKFTKKEFQA TVEEGAVGVI VNLTVEDKDD PTTGAWRAAY TIINGNPGQS FEIHTNPQTN EGMLSVVKPL DYEISAFHTL LIKVENEDPL VPDVSYGPSS TATVHITVLD VNEGPVFYPD PMMVTRQEDL SVGSVLLTVN ATDPDSLQHQ TIRYSVYKDP AGWLNINPIN GTVDTTAVLD RESPFVDNSV YTALFLAIDS GNPPATGTGT LLITLEDVND NAPFIYPTVA EVCDDAKNLS VVILGASDKD LHPNTDPFKF EIHKQAVPDK VWKISKINNT HALVSLLQNL NKANYNLPIM VTDSGKPPMT NITDLRVQVC SCRNSKVDCN AAGALRFSLP SVLLLSLFSL ACL
Genular Protein ID: 60758181
Symbol: B7Z9B1_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 760
- Mass: 83408
- Checksum: 65D9C11190FCBF5C
- Sequence:
MKTPPGASSR TKCSRELRSF CAFSCPRAKQ PTCTAWFPQQ EHPSENGPQM PGRDSPAAST MQVLLLTSAE DLDCTPGFQQ KVFHINQPAE FIEDQSILNL TFSDCKGNDK LRYEVSSPYF KVNSDGGLVA LRNITAVGKT LFVHARTPHA EDMAELVIVG GKDIQGSLQD IFKFARTSPV PRQKRSIVVS PILIPENQRQ PFPRDVGKVV DSDRPERSKF RLTGKGVDQE PKGIFRINEN TGSVSVTRTL DREVIAVYQL FVETTDVNGK TLEGPVPLEV IVIDQNDNRP IFREGPYIGH VMEGSPTGTT VMRMTAFDAD DPATDNALLR YNIRQQTPDK PSPNMFYIDP EKGDIVTVVS PALLDRETLE NPKYELIIEA QDMAGLDFGL TGTATATIMI DDKNDHSPKF TKKEFQATVE EGAVGVIVNL TVEDKDDPTT GAWRAAYTII NGNPGQSFEI HTNPQTNEGM LSVVKPLDYE ISAFHTLLIK VENEDPLVPD VSYGPSSTAT VHITVLDVNE GPVFYPDPMM VTRQEDLSVG SVLLTVNATD PDSLQHQTIR YSVYKDPAGW LNINPINGTV DTTAVLDRES PFVDNSVYTA LFLAIDSGNP PATGTGTLLI TLEDVNDNAP FIYPTVAEVC DDAKNLSVVI LGASDKDLHP NTDPFKFEIH KQAVPDKVWK ISKINNTHAL VSLLQSLNKA NYNLPIMVTD SGKPPMTNIT DLRVQVCSCR NSKVDCNAAG ALRFSLPSVL LLSLFSLACL
Genular Protein ID: 3019639236
Symbol: B7Z3H7_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 459
- Mass: 49951
- Checksum: 2EF090EA0143C77C
- Sequence:
MEGSPTGTTV MRMTAFDADD PATDNALLRY NIRQQTPDKP SPNMFYIDPE KGDIVTVVSP ALLDRETPEN PKYELIIEAQ DMAGLDVGLT GTATATIMID DKNDHSPKFT KKEFQATVEE GAVGVIVNLT VEDKDDPTTG AWRAAYTIIN GNPGQSFEIH TNPQTNEGML SVVKPLDYEI SAFHTLLIKV ENEDPLVPDV SYGPSSTATV HITVLDVNEG PVFYPDPMMV TRQEDLSVGS VLLTVNATDP DSLQHQTIRY SVYKDPAGWL NINPINGTVD TTAVLDRESP FVDNSVYTAL FLAIDSGNPP ATGTGTLLIT LEDVNDNAPF IYPTVAEVCD DAKNLSVVIL GASDKDLHPN TDPFKFEIHK QAVPDKVWKI SKINNTHALV SLLQNLNKAN YNLPIMVTDS GKPPMTNITD LRVQVCSCRN SKVDCNAAGA LRFSLPSVLL LSLFSLACL