Details for: TUBA1B

Gene ID: 10376

Symbol: TUBA1B

Ensembl ID: ENSG00000123416

Description: tubulin alpha 1b

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: early promyelocyte (CL0002154)
    Fold Change: 5.19
    Marker Score: 4155
  • Cell Name: cord blood hematopoietic stem cell (CL2000095)
    Fold Change: 4.75
    Marker Score: 3582
  • Cell Name: mesenchymal stem cell (CL0000134)
    Fold Change: 4.23
    Marker Score: 6517
  • Cell Name: chromaffin cell (CL0000166)
    Fold Change: 4.17
    Marker Score: 5867
  • Cell Name: radial glial cell (CL0000681)
    Fold Change: 4.15
    Marker Score: 1529
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: 4
    Marker Score: 3912
  • Cell Name: alveolar capillary type 1 endothelial cell (CL4028002)
    Fold Change: 3.99
    Marker Score: 10138
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: 3.88
    Marker Score: 16185
  • Cell Name: alveolar capillary type 2 endothelial cell (CL4028003)
    Fold Change: 3.76
    Marker Score: 5439
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 3.68
    Marker Score: 125268
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 3.53
    Marker Score: 4268
  • Cell Name: neural progenitor cell (CL0011020)
    Fold Change: 3.44
    Marker Score: 13324.5
  • Cell Name: embryonic stem cell (CL0002322)
    Fold Change: 3.42
    Marker Score: 1095
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: 3.41
    Marker Score: 8327
  • Cell Name: glycinergic amacrine cell (CL4030028)
    Fold Change: 3.34
    Marker Score: 3152
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: 3.33
    Marker Score: 9499
  • Cell Name: mesodermal cell (CL0000222)
    Fold Change: 3.33
    Marker Score: 43887
  • Cell Name: Sertoli cell (CL0000216)
    Fold Change: 3.24
    Marker Score: 19231
  • Cell Name: late promyelocyte (CL0002151)
    Fold Change: 3.23
    Marker Score: 811
  • Cell Name: mature T cell (CL0002419)
    Fold Change: 3.14
    Marker Score: 31123
  • Cell Name: vascular lymphangioblast (CL0005022)
    Fold Change: 3.12
    Marker Score: 5277
  • Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
    Fold Change: 3.09
    Marker Score: 2638
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 3.09
    Marker Score: 20080
  • Cell Name: lung macrophage (CL1001603)
    Fold Change: 3.06
    Marker Score: 3506
  • Cell Name: erythroblast (CL0000765)
    Fold Change: 3.05
    Marker Score: 1905
  • Cell Name: fibroblast of breast (CL4006000)
    Fold Change: 3.04
    Marker Score: 1736
  • Cell Name: chondrocyte (CL0000138)
    Fold Change: 3.02
    Marker Score: 1358
  • Cell Name: endocardial cell (CL0002350)
    Fold Change: 3
    Marker Score: 1696
  • Cell Name: fetal cardiomyocyte (CL0002495)
    Fold Change: 3
    Marker Score: 987
  • Cell Name: GABAergic amacrine cell (CL4030027)
    Fold Change: 3
    Marker Score: 6088
  • Cell Name: capillary endothelial cell (CL0002144)
    Fold Change: 2.97
    Marker Score: 3200
  • Cell Name: basophil (CL0000767)
    Fold Change: 2.96
    Marker Score: 1408
  • Cell Name: myelocyte (CL0002193)
    Fold Change: 2.96
    Marker Score: 1279
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 2.95
    Marker Score: 705
  • Cell Name: activated CD4-positive, alpha-beta T cell, human (CL0001043)
    Fold Change: 2.93
    Marker Score: 1332
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: 2.92
    Marker Score: 11256
  • Cell Name: granulocyte (CL0000094)
    Fold Change: 2.92
    Marker Score: 1307
  • Cell Name: endothelial cell (CL0000115)
    Fold Change: 2.9
    Marker Score: 2597
  • Cell Name: fibroblast of connective tissue of glandular part of prostate (CL1000305)
    Fold Change: 2.89
    Marker Score: 1205
  • Cell Name: skeletal muscle satellite stem cell (CL0008011)
    Fold Change: 2.88
    Marker Score: 3077
  • Cell Name: migratory enteric neural crest cell (CL0002607)
    Fold Change: 2.87
    Marker Score: 2702
  • Cell Name: cell of skeletal muscle (CL0000188)
    Fold Change: 2.86
    Marker Score: 2177.5
  • Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
    Fold Change: 2.83
    Marker Score: 1777
  • Cell Name: epithelial cell (CL0000066)
    Fold Change: 2.79
    Marker Score: 4444
  • Cell Name: myoepithelial cell of mammary gland (CL0002324)
    Fold Change: 2.78
    Marker Score: 13673
  • Cell Name: blood cell (CL0000081)
    Fold Change: 2.78
    Marker Score: 32289.5
  • Cell Name: Unknown (CL0000548)
    Fold Change: 2.77
    Marker Score: 2017
  • Cell Name: stromal cell (CL0000499)
    Fold Change: 2.76
    Marker Score: 3238
  • Cell Name: decidual natural killer cell, human (CL0002343)
    Fold Change: 2.76
    Marker Score: 7627
  • Cell Name: Kupffer cell (CL0000091)
    Fold Change: 2.75
    Marker Score: 2755
  • Cell Name: effector CD8-positive, alpha-beta T cell (CL0001050)
    Fold Change: 2.74
    Marker Score: 2306
  • Cell Name: CD1c-positive myeloid dendritic cell (CL0002399)
    Fold Change: 2.74
    Marker Score: 7095
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 2.74
    Marker Score: 815
  • Cell Name: endothelial cell of uterus (CL0009095)
    Fold Change: 2.73
    Marker Score: 5446
  • Cell Name: bronchus fibroblast of lung (CL2000093)
    Fold Change: 2.72
    Marker Score: 3738
  • Cell Name: muscle precursor cell (CL0000680)
    Fold Change: 2.72
    Marker Score: 704
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 2.72
    Marker Score: 11116
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 2.71
    Marker Score: 27448
  • Cell Name: smooth muscle cell (CL0000192)
    Fold Change: 2.71
    Marker Score: 1782
  • Cell Name: reticular cell (CL0000432)
    Fold Change: 2.7
    Marker Score: 987
  • Cell Name: motor neuron (CL0000100)
    Fold Change: 2.67
    Marker Score: 1586
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: 2.64
    Marker Score: 1148
  • Cell Name: inhibitory motor neuron (CL0008015)
    Fold Change: 2.64
    Marker Score: 1246
  • Cell Name: neural crest cell (CL0011012)
    Fold Change: 2.64
    Marker Score: 2817
  • Cell Name: epithelial cell of nephron (CL1000449)
    Fold Change: 2.63
    Marker Score: 5499
  • Cell Name: primary sensory neuron (sensu Teleostei) (CL0000531)
    Fold Change: 2.62
    Marker Score: 882
  • Cell Name: type I NK T cell (CL0000921)
    Fold Change: 2.62
    Marker Score: 2056.5
  • Cell Name: alveolar macrophage (CL0000583)
    Fold Change: 2.61
    Marker Score: 66922
  • Cell Name: CD4-positive helper T cell (CL0000492)
    Fold Change: 2.61
    Marker Score: 2836
  • Cell Name: naive B cell (CL0000788)
    Fold Change: 2.61
    Marker Score: 2327
  • Cell Name: pericyte (CL0000669)
    Fold Change: 2.6
    Marker Score: 1520
  • Cell Name: alternatively activated macrophage (CL0000890)
    Fold Change: 2.59
    Marker Score: 1081
  • Cell Name: adipocyte of epicardial fat of left ventricle (CL1000311)
    Fold Change: 2.59
    Marker Score: 682.5
  • Cell Name: peripheral nervous system neuron (CL2000032)
    Fold Change: 2.59
    Marker Score: 2909
  • Cell Name: enteric smooth muscle cell (CL0002504)
    Fold Change: 2.58
    Marker Score: 6071
  • Cell Name: decidual cell (CL2000002)
    Fold Change: 2.57
    Marker Score: 11063
  • Cell Name: endothelial tip cell (CL0000704)
    Fold Change: 2.56
    Marker Score: 597
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 2.56
    Marker Score: 25751.5
  • Cell Name: prostate gland microvascular endothelial cell (CL2000059)
    Fold Change: 2.55
    Marker Score: 991
  • Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
    Fold Change: 2.54
    Marker Score: 1242
  • Cell Name: microglial cell (CL0000129)
    Fold Change: 2.54
    Marker Score: 4632
  • Cell Name: mammary gland epithelial cell (CL0002327)
    Fold Change: 2.54
    Marker Score: 903
  • Cell Name: lung ciliated cell (CL1000271)
    Fold Change: 2.54
    Marker Score: 1203
  • Cell Name: supporting cell (CL0000630)
    Fold Change: 2.53
    Marker Score: 4761
  • Cell Name: pulmonary artery endothelial cell (CL1001568)
    Fold Change: 2.53
    Marker Score: 2178
  • Cell Name: CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell (CL0000915)
    Fold Change: 2.53
    Marker Score: 3580
  • Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
    Fold Change: 2.52
    Marker Score: 1054
  • Cell Name: interstitial cell of Cajal (CL0002088)
    Fold Change: 2.52
    Marker Score: 871
  • Cell Name: promonocyte (CL0000559)
    Fold Change: 2.52
    Marker Score: 1620.5
  • Cell Name: vascular associated smooth muscle cell (CL0000359)
    Fold Change: 2.51
    Marker Score: 1152
  • Cell Name: pneumocyte (CL0000322)
    Fold Change: 2.51
    Marker Score: 4030
  • Cell Name: theca cell (CL0000503)
    Fold Change: 2.5
    Marker Score: 1793
  • Cell Name: epithelial cell of lower respiratory tract (CL0002632)
    Fold Change: 2.49
    Marker Score: 10383
  • Cell Name: starburst amacrine cell (CL0004232)
    Fold Change: 2.49
    Marker Score: 706
  • Cell Name: IgA plasmablast (CL0000984)
    Fold Change: 2.49
    Marker Score: 653
  • Cell Name: mature microglial cell (CL0002629)
    Fold Change: 2.48
    Marker Score: 895
  • Cell Name: fibroblast of lung (CL0002553)
    Fold Change: 2.47
    Marker Score: 6477
  • Cell Name: ovarian surface epithelial cell (CL2000064)
    Fold Change: 2.47
    Marker Score: 6730
  • Cell Name: CD16-positive, CD56-dim natural killer cell, human (CL0000939)
    Fold Change: 2.47
    Marker Score: 1912
  • Cell Name: meningeal macrophage (CL0000879)
    Fold Change: 2.47
    Marker Score: 695

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Other Information

**Key characteristics:** - It is a microtubule-associated protein (MAP). - It is expressed in a variety of cell types, including early promyelocytes, cord blood hematopoietic stem cells, and fibroblasts. - It is a highly dynamic protein that undergoes significant changes in its structure and function depending on the cellular context. **Pathways and functions:** - **Adaptive immune system:** TUBA1B is a key component of microvilli in epithelial cells, where it is involved in the formation of cell-cell junctions and the maintenance of epithelial integrity. - **Autophagy:** It is a key regulator of autophagy, a cellular process that removes damaged or unnecessary proteins and organelles from the cell. - **Cell cycle:** TUBA1B is involved in the regulation of cell cycle progression by interacting with other microtubule proteins. - **Cellular responses to stimuli:** It plays a role in the regulation of cellular responses to various stimuli, including growth factors, cytokines, and stress factors. - **Cytokine signaling in immune system:** TUBA1B is a key component of the cytokine signaling pathway in immune cells, where it interacts with various cytokine receptors. - **Developmental biology:** It is expressed in the developing embryo and plays a role in the specification of neural cell fate. - **Disease:** Mutations in TUBA1B have been linked to several human diseases, including cancer, neurodegenerative disorders, and developmental abnormalities. - **Hemostasis:** It is involved in blood clotting and hemostasis by interacting with clotting factors and promoting the formation of blood clots. - **Immune system:** It is expressed on immune cells and plays a role in the regulation of immune responses. - **Macroautophagy:** It is involved in macroautophagy, a process that removes damaged or dysfunctional organelles from the cell. - **Membrane trafficking:** It is involved in the transport of proteins and organelles between different cellular compartments. - **Protein folding:** It helps to maintain the proper folding and stability of other microtubule proteins. - **Signaling by hedgehog:** It is a key component of the hedgehog signaling pathway, which is involved in cell growth, differentiation, and migration. - **Signal transduction:** It is a key component of various signal transduction pathways in cells. - **Transmission across chemical synapses:** It is involved in the transmission of chemical signals between neurons. - **Vesicle-mediated transport:** It is involved in the transport of vesicles between different cellular compartments. **Clinical significance:** - Mutations in TUBA1B have been linked to several human diseases, including cancer, neurodegenerative disorders, and developmental abnormalities. - Targeting TUBA1B has been investigated as a potential therapeutic strategy for these diseases. - TUBA1B is a promising target for the development of novel therapies for cancer and neurodegenerative disorders.

Genular Protein ID: 2199757415

Symbol: TBA1B_HUMAN

Name: Tubulin alpha-1B chain

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 6646120

Title: Expression of human alpha-tubulin genes: interspecies conservation of 3' untranslated regions.

PubMed ID: 6646120

DOI: 10.1128/mcb.3.10.1738-1745.1983

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8619814

Title: C-terminal fragments of alpha- and beta-tubulin form amyloid fibrils in vitro and associate with amyloid deposits of familial cerebral amyloid angiopathy, British type.

PubMed ID: 8619814

DOI: 10.1006/bbrc.1996.0211

PubMed ID: 10339593

Title: Microtubule dysfunction by posttranslational nitrotyrosination of alpha-tubulin: a nitric oxide-dependent mechanism of cellular injury.

PubMed ID: 10339593

DOI: 10.1073/pnas.96.11.6365

PubMed ID: 19524510

Title: Evolutionary divergence of enzymatic mechanisms for posttranslational polyglycylation.

PubMed ID: 19524510

DOI: 10.1016/j.cell.2009.05.020

PubMed ID: 24906155

Title: Molecular basis for age-dependent microtubule acetylation by tubulin acetyltransferase.

PubMed ID: 24906155

DOI: 10.1016/j.cell.2014.03.061

PubMed ID: 25944712

Title: N-terminome analysis of the human mitochondrial proteome.

PubMed ID: 25944712

DOI: 10.1002/pmic.201400617

PubMed ID: 25908662

Title: Mitosis. Microtubule detyrosination guides chromosomes during mitosis.

PubMed ID: 25908662

DOI: 10.1126/science.aaa5175

PubMed ID: 26875866

Title: Graded control of microtubule severing by tubulin glutamylation.

PubMed ID: 26875866

DOI: 10.1016/j.cell.2016.01.019

PubMed ID: 27518565

Title: Dual chromatin and cytoskeletal remodeling by SETD2.

PubMed ID: 27518565

DOI: 10.1016/j.cell.2016.07.005

PubMed ID: 26972003

Title: Alpha-tubulin tyrosination and CLIP-170 phosphorylation regulate the initiation of dynein-driven transport in neurons.

PubMed ID: 26972003

DOI: 10.1016/j.celrep.2016.02.046

PubMed ID: 29146869

Title: Vasohibins encode tubulin detyrosinating activity.

PubMed ID: 29146869

DOI: 10.1126/science.aao5676

PubMed ID: 32747782

Title: Structural basis for polyglutamate chain initiation and elongation by TTLL family enzymes.

PubMed ID: 32747782

DOI: 10.1038/s41594-020-0462-0

PubMed ID: 31727855

Title: TTC5 mediates autoregulation of tubulin via mRNA degradation.

PubMed ID: 31727855

DOI: 10.1126/science.aaz4352

PubMed ID: 17563362

Title: Structural basis for tubulin recognition by cytoplasmic linker protein 170 and its autoinhibition.

PubMed ID: 17563362

DOI: 10.1073/pnas.0703876104

PubMed ID: 34996871

Title: Structural transitions in the GTP cap visualized by cryo-electron microscopy of catalytically inactive microtubules.

PubMed ID: 34996871

DOI: 10.1073/pnas.2114994119

PubMed ID: 35482892

Title: Posttranslational modification of microtubules by the MATCAP detyrosinase.

PubMed ID: 35482892

DOI: 10.1126/science.abn6020

Sequence Information:

  • Length: 451
  • Mass: 50152
  • Checksum: 94355B4EC2086429
  • Sequence:
  • MRECISIHVG QAGVQIGNAC WELYCLEHGI QPDGQMPSDK TIGGGDDSFN TFFSETGAGK 
    HVPRAVFVDL EPTVIDEVRT GTYRQLFHPE QLITGKEDAA NNYARGHYTI GKEIIDLVLD 
    RIRKLADQCT GLQGFLVFHS FGGGTGSGFT SLLMERLSVD YGKKSKLEFS IYPAPQVSTA 
    VVEPYNSILT THTTLEHSDC AFMVDNEAIY DICRRNLDIE RPTYTNLNRL ISQIVSSITA 
    SLRFDGALNV DLTEFQTNLV PYPRIHFPLA TYAPVISAEK AYHEQLSVAE ITNACFEPAN 
    QMVKCDPRHG KYMACCLLYR GDVVPKDVNA AIATIKTKRS IQFVDWCPTG FKVGINYQPP 
    TVVPGGDLAK VQRAVCMLSN TTAIAEAWAR LDHKFDLMYA KRAFVHWYVG EGMEEGEFSE 
    AREDMAALEK DYEEVGVDSV EGEGEEEGEE Y

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.