Details for: CEACAM5

Gene ID: 1048

Symbol: CEACAM5

Ensembl ID: ENSG00000105388

Description: CEA cell adhesion molecule 5

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: ileal goblet cell (CL1000326)
    Fold Change: 21.7728
    Cell Significance Index: -14.6100
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 7.1196
    Cell Significance Index: 322.7100
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 5.4501
    Cell Significance Index: -14.6000
  • Cell Name: large intestine goblet cell (CL1000320)
    Fold Change: 4.5785
    Cell Significance Index: 49.6200
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: 3.3303
    Cell Significance Index: 388.1200
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 1.5588
    Cell Significance Index: 33.7700
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 1.4594
    Cell Significance Index: 1317.7100
  • Cell Name: paneth cell of colon (CL0009009)
    Fold Change: 1.4562
    Cell Significance Index: 21.8200
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 1.2711
    Cell Significance Index: 125.7400
  • Cell Name: pancreatic endocrine cell (CL0008024)
    Fold Change: 1.1001
    Cell Significance Index: 125.5800
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.9187
    Cell Significance Index: 63.5300
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: 0.8368
    Cell Significance Index: 26.8000
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.7834
    Cell Significance Index: 127.4100
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.5128
    Cell Significance Index: 18.0200
  • Cell Name: tracheal goblet cell (CL1000329)
    Fold Change: 0.4234
    Cell Significance Index: 3.5000
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: 0.3881
    Cell Significance Index: 81.7500
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.2949
    Cell Significance Index: 32.0800
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.1801
    Cell Significance Index: 34.2700
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.0986
    Cell Significance Index: 2.8400
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: 0.0790
    Cell Significance Index: 49.3500
  • Cell Name: foveolar cell of stomach (CL0002179)
    Fold Change: 0.0552
    Cell Significance Index: 0.3600
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: 0.0235
    Cell Significance Index: 0.5000
  • Cell Name: enteroendocrine cell of small intestine (CL0009006)
    Fold Change: 0.0232
    Cell Significance Index: 0.5800
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.0222
    Cell Significance Index: 12.1500
  • Cell Name: eukaryotic cell (CL0000255)
    Fold Change: 0.0129
    Cell Significance Index: 0.5600
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.0019
    Cell Significance Index: 0.3400
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0004
    Cell Significance Index: -0.2900
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.0005
    Cell Significance Index: -0.2600
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0155
    Cell Significance Index: -11.7000
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: -0.0260
    Cell Significance Index: -3.2000
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.0378
    Cell Significance Index: -17.1400
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: -0.0388
    Cell Significance Index: -13.9100
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: -0.0601
    Cell Significance Index: -0.8200
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -0.0649
    Cell Significance Index: -3.9800
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: -0.0690
    Cell Significance Index: -13.8400
  • Cell Name: L4 intratelencephalic projecting glutamatergic neuron (CL4030063)
    Fold Change: -0.0693
    Cell Significance Index: -0.7600
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: -0.0715
    Cell Significance Index: -12.2100
  • Cell Name: hepatoblast (CL0005026)
    Fold Change: -0.0749
    Cell Significance Index: -1.2600
  • Cell Name: fibro/adipogenic progenitor cell (CL0009099)
    Fold Change: -0.0809
    Cell Significance Index: -4.0900
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: -0.0847
    Cell Significance Index: -1.2500
  • Cell Name: epithelial cell (CL0000066)
    Fold Change: -0.0905
    Cell Significance Index: -0.9600
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: -0.0958
    Cell Significance Index: -13.1500
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.1021
    Cell Significance Index: -11.7000
  • Cell Name: neuron associated cell (CL0000095)
    Fold Change: -0.1043
    Cell Significance Index: -4.2800
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: -0.1147
    Cell Significance Index: -1.1600
  • Cell Name: progenitor cell (CL0011026)
    Fold Change: -0.1299
    Cell Significance Index: -1.3800
  • Cell Name: lactocyte (CL0002325)
    Fold Change: -0.1320
    Cell Significance Index: -17.0500
  • Cell Name: keratinocyte (CL0000312)
    Fold Change: -0.1529
    Cell Significance Index: -3.8200
  • Cell Name: enterocyte (CL0000584)
    Fold Change: -0.1596
    Cell Significance Index: -0.9900
  • Cell Name: stratified epithelial cell (CL0000079)
    Fold Change: -0.1697
    Cell Significance Index: -6.2300
  • Cell Name: respiratory epithelial cell (CL0002368)
    Fold Change: -0.1786
    Cell Significance Index: -1.0700
  • Cell Name: mesothelial cell of epicardium (CL0011019)
    Fold Change: -0.1816
    Cell Significance Index: -1.5700
  • Cell Name: endothelial cell of venule (CL1000414)
    Fold Change: -0.1817
    Cell Significance Index: -2.0600
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: -0.1893
    Cell Significance Index: -14.5300
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.2249
    Cell Significance Index: -16.7600
  • Cell Name: stem cell (CL0000034)
    Fold Change: -0.2394
    Cell Significance Index: -1.7400
  • Cell Name: goblet cell (CL0000160)
    Fold Change: -0.2421
    Cell Significance Index: -2.1900
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: -0.2430
    Cell Significance Index: -5.0400
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: -0.2486
    Cell Significance Index: -15.2800
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: -0.2762
    Cell Significance Index: -15.5000
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: -0.2786
    Cell Significance Index: -12.9900
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: -0.2974
    Cell Significance Index: -15.4900
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -0.3096
    Cell Significance Index: -9.1200
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: -0.3151
    Cell Significance Index: -16.3700
  • Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
    Fold Change: -0.3166
    Cell Significance Index: -4.2200
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -0.3329
    Cell Significance Index: -20.9800
  • Cell Name: respiratory goblet cell (CL0002370)
    Fold Change: -0.3403
    Cell Significance Index: -3.5100
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: -0.3475
    Cell Significance Index: -15.3700
  • Cell Name: fallopian tube secretory epithelial cell (CL4030006)
    Fold Change: -0.3716
    Cell Significance Index: -5.7500
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: -0.3932
    Cell Significance Index: -18.4800
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: -0.3956
    Cell Significance Index: -13.8600
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: -0.4046
    Cell Significance Index: -15.3200
  • Cell Name: BEST4+ enteroycte (CL4030026)
    Fold Change: -0.4194
    Cell Significance Index: -6.3200
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -0.4356
    Cell Significance Index: -14.2600
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -0.4584
    Cell Significance Index: -14.6000
  • Cell Name: CD14-positive monocyte (CL0001054)
    Fold Change: -0.5529
    Cell Significance Index: -10.8100
  • Cell Name: epithelial cell of pancreas (CL0000083)
    Fold Change: -0.5541
    Cell Significance Index: -9.1300
  • Cell Name: squamous epithelial cell (CL0000076)
    Fold Change: -0.5825
    Cell Significance Index: -7.0900
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: -0.5835
    Cell Significance Index: -6.0400
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: -0.5913
    Cell Significance Index: -14.7500
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: -0.5951
    Cell Significance Index: -17.0600
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: -0.6288
    Cell Significance Index: -16.7900
  • Cell Name: choroid plexus epithelial cell (CL0000706)
    Fold Change: -0.6563
    Cell Significance Index: -7.8100
  • Cell Name: cerebral cortex endothelial cell (CL1001602)
    Fold Change: -0.6659
    Cell Significance Index: -13.5500
  • Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
    Fold Change: -0.6741
    Cell Significance Index: -16.8100
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: -0.6753
    Cell Significance Index: -14.5900
  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: -0.6947
    Cell Significance Index: -16.6600
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: -0.7034
    Cell Significance Index: -14.9300
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: -0.7221
    Cell Significance Index: -15.0700
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: -0.7439
    Cell Significance Index: -14.7100
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: -0.7487
    Cell Significance Index: -20.3800
  • Cell Name: VIP GABAergic cortical interneuron (CL4023016)
    Fold Change: -0.7556
    Cell Significance Index: -15.1700
  • Cell Name: sncg GABAergic cortical interneuron (CL4023015)
    Fold Change: -0.7578
    Cell Significance Index: -14.9200
  • Cell Name: intestinal crypt stem cell (CL0002250)
    Fold Change: -0.7645
    Cell Significance Index: -5.3800
  • Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
    Fold Change: -0.7793
    Cell Significance Index: -15.5400
  • Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
    Fold Change: -0.7918
    Cell Significance Index: -19.1800
  • Cell Name: centrilobular region hepatocyte (CL0019029)
    Fold Change: -0.7943
    Cell Significance Index: -13.3800
  • Cell Name: nasal mucosa goblet cell (CL0002480)
    Fold Change: -0.7981
    Cell Significance Index: -8.1400
  • Cell Name: seromucus secreting cell (CL0000159)
    Fold Change: -0.8166
    Cell Significance Index: -17.0300
  • Cell Name: epithelial cell of uterus (CL0002149)
    Fold Change: -0.8281
    Cell Significance Index: -11.4900

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** 1. **Cell Surface Expression**: CEACAM5 is primarily expressed on the surface of epithelial cells, where it plays a crucial role in cell adhesion and signaling. 2. **Glycosylphosphatidylinositol (GPI) Anchor**: CEACAM5 is attached to the cell membrane via a GPI anchor, which allows for its interaction with other molecules and cellular processes. 3. **Homophilic and Heterophilic Interactions**: CEACAM5 can form homophilic and heterophilic interactions with other cell surface molecules, influencing cell adhesion, migration, and signaling. 4. **Regulation of Immune Responses**: CEACAM5 has been shown to modulate immune responses by regulating the activity of immune cells, such as T cells and dendritic cells. **Pathways and Functions:** 1. **Apoptosis and Anoikis**: CEACAM5 has been implicated in the regulation of apoptosis and anoikis, influencing cell survival and migration. 2. **Cell Migration and Invasion**: CEACAM5 plays a role in cell migration and invasion, particularly in the context of cancer development and metastasis. 3. **Immune Cell Signaling**: CEACAM5 interacts with immune cells, influencing their activation, differentiation, and function. 4. **Cancer Development and Progression**: CEACAM5 has been linked to the development and progression of various cancers, including colorectal, lung, and breast carcinomas. **Clinical Significance:** CEACAM5 has been implicated in various diseases, including: 1. **Cancer**: CEACAM5 is overexpressed in several types of cancer, including colorectal, lung, and breast carcinomas, and has been associated with poor prognosis. 2. **Autoimmune Diseases**: CEACAM5 has been implicated in autoimmune diseases, such as rheumatoid arthritis and multiple sclerosis, where it may influence immune cell function and regulation. 3. **Infectious Diseases**: CEACAM5 has been shown to play a role in the regulation of immune responses to infections, such as respiratory syncytial virus (RSV) and influenza. In conclusion, CEACAM5 is a multifunctional protein that plays a critical role in various cellular processes, including cell adhesion, signaling, and immune regulation. Its dysregulation has been implicated in various diseases, including cancer, autoimmune diseases, and infectious diseases. Further studies are needed to elucidate the complex functions of CEACAM5 and its role in human disease pathogenesis.

Genular Protein ID: 1817482593

Symbol: CEAM5_HUMAN

Name: Carcinoembryonic antigen-related cell adhesion molecule 5

UniProtKB Accession Codes:

P06731 H9KVA7

Database IDs:

ABCD 1 AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 2 CDD 3 CTD 1 ChEMBL 1 ChiTaRS 1 DIP 1 DMDM 1 DNASU 1 DisGeNET 1 DrugBank 2 EMBL 16 EMDB 1 Ensembl 4 EvolutionaryTrace 1 ExpressionAtlas 1 GO 18 Gene3D 1 GeneCards 1 GeneTree 1 GeneWiki 1 GenomeRNAi 1 GlyConnect 1 GlyCosmos 1 GlyGen 1 HGNC 1 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 7 KEGG 1 MANE-Select 1 MIM 1 MINT 1 MassIVE 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PDB 5 PDBsum 5 PIR 1 PRIDE 1 PRO 1 PROSITE 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 3 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 2 RNAct 1 Reactome 2 RefSeq 4 SMART 2 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 3670312

Title: Isolation and characterization of full-length functional cDNA clones for human carcinoembryonic antigen.

PubMed ID: 3670312

DOI: 10.1128/mcb.7.9.3221-3230.1987

PubMed ID: 3220478

Title: Carcinoembryonic antigen family: characterization of cDNAs coding for NCA and CEA and suggestion of nonrandom sequence variation in their conserved loop-domains.

PubMed ID: 3220478

DOI: 10.1016/0888-7543(88)90160-7

PubMed ID: 2342461

Title: Cloning of the complete gene for carcinoembryonic antigen: analysis of its promoter indicates a region conveying cell type-specific expression.

PubMed ID: 2342461

DOI: 10.1128/mcb.10.6.2738-2748.1990

PubMed ID: 15057824

Title: The DNA sequence and biology of human chromosome 19.

PubMed ID: 15057824

DOI: 10.1038/nature02399

PubMed ID: 3814146

Title: Primary structure of human carcinoembryonic antigen (CEA) deduced from cDNA sequence.

PubMed ID: 3814146

DOI: 10.1016/0006-291x(87)90304-4

PubMed ID: 3033671

Title: Isolation and characterization of cDNA clones encoding the human carcinoembryonic antigen reveal a highly conserved repeating structure.

PubMed ID: 3033671

DOI: 10.1073/pnas.84.9.2960

PubMed ID: 2803308

Title: Cell adhesion activity of non-specific cross-reacting antigen (NCA) and carcinoembryonic antigen (CEA) expressed on CHO cell surface: homophilic and heterophilic adhesion.

PubMed ID: 2803308

DOI: 10.1016/0006-291x(89)91679-3

PubMed ID: 2317824

Title: Expression of complementary DNA and genomic clones for carcinoembryonic antigen and nonspecific cross-reacting antigen in Chinese hamster ovary and mouse fibroblast cells and characterization of the membrane-expressed products.

PubMed ID: 2317824

PubMed ID: 10436421

Title: Four carcinoembryonic antigen subfamily members, CEA, NCA, BGP and CGM2, selectively expressed in the normal human colonic epithelium, are integral components of the fuzzy coat.

PubMed ID: 10436421

DOI: 10.1159/000030075

PubMed ID: 10910050

Title: Human carcinoembryonic antigen functions as a general inhibitor of anoikis.

PubMed ID: 10910050

PubMed ID: 10864933

Title: Self recognition in the Ig superfamily. Identification of precise subdomains in carcinoembryonic antigen required for intercellular adhesion.

PubMed ID: 10864933

DOI: 10.1074/jbc.m909242199

PubMed ID: 16740002

Title: Identification of N-linked glycoproteins in human saliva by glycoprotein capture and mass spectrometry.

PubMed ID: 16740002

DOI: 10.1021/pr050492k

PubMed ID: 19159218

Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.

PubMed ID: 19159218

DOI: 10.1021/pr8008012

PubMed ID: 26483485

Title: Diverse oligomeric states of CEACAM IgV domains.

PubMed ID: 26483485

DOI: 10.1073/pnas.1509511112

PubMed ID: 10854848

Title: Structural models for carcinoembryonic antigen and its complex with the single-chain Fv antibody molecule MFE23.

PubMed ID: 10854848

DOI: 10.1016/s0014-5793(00)01612-4

PubMed ID: 18086185

Title: Binding of Dr adhesins of Escherichia coli to carcinoembryonic antigen triggers receptor dissociation.

PubMed ID: 18086185

DOI: 10.1111/j.1365-2958.2007.06054.x

Sequence Information:

  • Length: 702
  • Mass: 76796
  • Checksum: 6299AE26CDDBDB5C
  • Sequence:
    • MESPSAPPHR WCIPWQRLLL TASLLTFWNP PTTAKLTIES TPFNVAEGKE VLLLVHNLPQ 
HLFGYSWYKG ERVDGNRQII GYVIGTQQAT PGPAYSGREI IYPNASLLIQ NIIQNDTGFY 
TLHVIKSDLV NEEATGQFRV YPELPKPSIS SNNSKPVEDK DAVAFTCEPE TQDATYLWWV 
NNQSLPVSPR LQLSNGNRTL TLFNVTRNDT ASYKCETQNP VSARRSDSVI LNVLYGPDAP 
TISPLNTSYR SGENLNLSCH AASNPPAQYS WFVNGTFQQS TQELFIPNIT VNNSGSYTCQ 
AHNSDTGLNR TTVTTITVYA EPPKPFITSN NSNPVEDEDA VALTCEPEIQ NTTYLWWVNN 
QSLPVSPRLQ LSNDNRTLTL LSVTRNDVGP YECGIQNELS VDHSDPVILN VLYGPDDPTI 
SPSYTYYRPG VNLSLSCHAA SNPPAQYSWL IDGNIQQHTQ ELFISNITEK NSGLYTCQAN 
NSASGHSRTT VKTITVSAEL PKPSISSNNS KPVEDKDAVA FTCEPEAQNT TYLWWVNGQS 
LPVSPRLQLS NGNRTLTLFN VTRNDARAYV CGIQNSVSAN RSDPVTLDVL YGPDTPIISP 
PDSSYLSGAN LNLSCHSASN PSPQYSWRIN GIPQQHTQVL FIAKITPNNN GTYACFVSNL 
ATGRNNSIVK SITVSASGTS PGLSAGATVG IMIGVLVGVA LI

Genular Protein ID: 1008400546

Symbol: Q53G30_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q53G30

Database IDs:

ARBA 1 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 3 CTD 1 DNASU 1 DisGeNET 1 EMBL 2 Gene3D 1 InterPro 7 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 PeptideAtlas 1 Pfam 3 RefSeq 2 SAM 1 SMART 2 SUPFAM 1

Citations:

PubMed ID: 8125298

Title: Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides.

PubMed ID: 8125298

DOI: 10.1016/0378-1119(94)90802-8

PubMed ID: 9373149

Title: Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library.

PubMed ID: 9373149

DOI: 10.1016/S0378-1119(97)00411-3

Sequence Information:

  • Length: 702
  • Mass: 76868
  • Checksum: 62992426CDDABB5C
  • Sequence:
    • MESPSAPPHR WCIPWQRLLL TASLLTFWNP PTTAKLTIES TPFNVAEGKE VLLLVHNLPQ 
HLFGYSWYKG ERVDGNRQII GYVIGTQQAT PGPAYSGREI IYPNASLLIQ NIIQNDTGFY 
TLHVIKSDLV NEEATGQFRV YPELPKPSIS SNNSKPVEDK DAVAFTCEPE TQDATYLWWV 
NNQSLPVSPR LQLSNGNRTL TLFNVTRNDT ASYKCETQNP VSARRSDSVI LNVLYGPDAP 
TISPLNTSYR SGENLNLSCH AASNPPAQYS WFVNGTFQQS TQELFIPNIT VNNSGSYTCQ 
AHNSDTGLNR TTVTTITVYA EPPKPFITSN NSNPVEDEDA VALTCEPEIQ NTTYLWWVNN 
QSLPVSPRLQ LSNDNRTLTL LSVTRNDVGP YECGIQNELS VDHSDPVILN VLYGPDDPTI 
SPSYTYYRPG VNLSLSCHAA SNPPAQYSWL IDENIQQHTQ ELFISNITEK NSGLYTCQAN 
NSASGHSRTT VKTITVSAEL PKPSISSNNS KPVEDKDAVA FTCEPEAQNT TYLWWVNGQS 
LPVSPRLQLS NGNRTLTLFN VTRNDARAYV CGIQNSVSAN RSDPVTLDVL YGPDTPIISP 
PDSSYLSGAN LNLSCHSASN PSPQYSWRIN GIPQQHTQVL FIAKITPNNN GTYACFVSNL 
ATGRNNSIVK SITVSASGTS PGLSAGATVG IMIGVLVGVA LI

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.