Details for: CHAT
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: Purkinje cell (CL0000121)
Fold Change: 3.6335
Cell Significance Index: 79.5600 - Cell Name: tuft cell of small intestine (CL0009080)
Fold Change: 2.3087
Cell Significance Index: 23.2900 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 1.4303
Cell Significance Index: 64.8300 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.9351
Cell Significance Index: 177.9500 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.7293
Cell Significance Index: 72.1400 - Cell Name: progenitor cell (CL0011026)
Fold Change: 0.7135
Cell Significance Index: 7.5800 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.6629
Cell Significance Index: 598.5300 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.5661
Cell Significance Index: 12.2700 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: 0.5276
Cell Significance Index: 7.5600 - Cell Name: cytotoxic T cell (CL0000910)
Fold Change: 0.4494
Cell Significance Index: 6.5500 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.3157
Cell Significance Index: 5.4100 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.2911
Cell Significance Index: 31.6600 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.2796
Cell Significance Index: 5.9600 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.2456
Cell Significance Index: 7.8700 - Cell Name: plasmacytoid dendritic cell (CL0000784)
Fold Change: 0.2118
Cell Significance Index: 2.7800 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.2087
Cell Significance Index: 33.9500 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.1815
Cell Significance Index: 12.5500 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.1310
Cell Significance Index: 3.2700 - Cell Name: neuron associated cell (sensu Vertebrata) (CL0000123)
Fold Change: 0.1027
Cell Significance Index: 1.1400 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0727
Cell Significance Index: 50.2600 - Cell Name: embryonic fibroblast (CL2000042)
Fold Change: 0.0711
Cell Significance Index: 0.3400 - Cell Name: granule cell (CL0000120)
Fold Change: 0.0685
Cell Significance Index: 0.7800 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.0301
Cell Significance Index: 1.8100 - Cell Name: syncytiotrophoblast cell (CL0000525)
Fold Change: 0.0242
Cell Significance Index: 0.2300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.0163
Cell Significance Index: 0.4700 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0154
Cell Significance Index: 0.5400 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: 0.0060
Cell Significance Index: 0.0900 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.0036
Cell Significance Index: 0.6100 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0035
Cell Significance Index: 0.7000 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.0016
Cell Significance Index: 0.0400 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0004
Cell Significance Index: 0.0800 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0004
Cell Significance Index: 0.7400 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0003
Cell Significance Index: 0.4600 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0002
Cell Significance Index: 0.4300 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0001
Cell Significance Index: -0.1200 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0014
Cell Significance Index: -0.5000 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0016
Cell Significance Index: -1.1700 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0021
Cell Significance Index: -1.3500 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0021
Cell Significance Index: -1.1800 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0024
Cell Significance Index: -1.1100 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0025
Cell Significance Index: -1.3600 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0031
Cell Significance Index: -0.8800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.0041
Cell Significance Index: -0.2500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0049
Cell Significance Index: -0.7100 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0062
Cell Significance Index: -1.3000 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0070
Cell Significance Index: -1.2700 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0108
Cell Significance Index: -1.3300 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0113
Cell Significance Index: -1.3000 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0138
Cell Significance Index: -1.4400 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0181
Cell Significance Index: -1.2200 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0189
Cell Significance Index: -1.1600 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.0196
Cell Significance Index: -0.2900 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.0201
Cell Significance Index: -0.5200 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.0214
Cell Significance Index: -0.3600 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: -0.0218
Cell Significance Index: -0.3100 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.0221
Cell Significance Index: -0.7000 - Cell Name: neuron (CL0000540)
Fold Change: -0.0222
Cell Significance Index: -0.2100 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0253
Cell Significance Index: -1.1200 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.0255
Cell Significance Index: -1.4300 - Cell Name: starburst amacrine cell (CL0004232)
Fold Change: -0.0266
Cell Significance Index: -0.3200 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0273
Cell Significance Index: -0.7600 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.0277
Cell Significance Index: -1.0500 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: -0.0281
Cell Significance Index: -0.5500 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.0289
Cell Significance Index: -0.7200 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0294
Cell Significance Index: -1.3800 - Cell Name: stellate neuron (CL0000122)
Fold Change: -0.0299
Cell Significance Index: -0.3400 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.0328
Cell Significance Index: -0.8800 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0343
Cell Significance Index: -1.8000 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0345
Cell Significance Index: -0.9200 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: -0.0367
Cell Significance Index: -0.5500 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0368
Cell Significance Index: -1.2900 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: -0.0368
Cell Significance Index: -0.5600 - Cell Name: nasal mucosa goblet cell (CL0002480)
Fold Change: -0.0382
Cell Significance Index: -0.3900 - Cell Name: L5/6 near-projecting glutamatergic neuron (CL4030067)
Fold Change: -0.0401
Cell Significance Index: -0.2100 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0408
Cell Significance Index: -1.3000 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.0418
Cell Significance Index: -1.3700 - Cell Name: amacrine cell (CL0000561)
Fold Change: -0.0431
Cell Significance Index: -0.5400 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.0449
Cell Significance Index: -1.2800 - Cell Name: basal cell of epidermis (CL0002187)
Fold Change: -0.0520
Cell Significance Index: -0.7900 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.0525
Cell Significance Index: -0.9700 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: -0.0532
Cell Significance Index: -0.4100 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.0533
Cell Significance Index: -1.3000 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.0540
Cell Significance Index: -1.1200 - Cell Name: hepatocyte (CL0000182)
Fold Change: -0.0548
Cell Significance Index: -0.7600 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.0573
Cell Significance Index: -1.4300 - Cell Name: neural cell (CL0002319)
Fold Change: -0.0574
Cell Significance Index: -0.6700 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.0577
Cell Significance Index: -0.9700 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.0608
Cell Significance Index: -1.2900 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.0612
Cell Significance Index: -2.5100 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.0617
Cell Significance Index: -1.4800 - Cell Name: thymocyte (CL0000893)
Fold Change: -0.0617
Cell Significance Index: -0.7800 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.0619
Cell Significance Index: -1.5000 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.0620
Cell Significance Index: -1.5800 - Cell Name: suprabasal keratinocyte (CL4033013)
Fold Change: -0.0628
Cell Significance Index: -1.0100 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.0643
Cell Significance Index: -1.3900 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
Fold Change: -0.0660
Cell Significance Index: -0.8500 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.0662
Cell Significance Index: -3.3500 - Cell Name: megakaryocyte (CL0000556)
Fold Change: -0.0667
Cell Significance Index: -1.0800 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -0.0667
Cell Significance Index: -0.6900 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.0672
Cell Significance Index: -1.3500
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1959035332
Symbol: CLAT_HUMAN
Name: Choline O-acetyltransferase
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1337937
Title: A complementary DNA for human choline acetyltransferase induces two forms of enzyme with different molecular weights in cultured cells.
PubMed ID: 1337937
PubMed ID: 11172068
Title: Choline acetyltransferase mutations cause myasthenic syndrome associated with episodic apnea in humans.
PubMed ID: 11172068
PubMed ID: 15164054
Title: The DNA sequence and comparative analysis of human chromosome 10.
PubMed ID: 15164054
DOI: 10.1038/nature02462
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 1388731
Title: Two mRNAs are transcribed from the human gene for choline acetyltransferase.
PubMed ID: 1388731
PubMed ID: 1339386
Title: Human choline acetyltransferase (CHAT): partial gene sequence and potential control regions.
PubMed ID: 1339386
PubMed ID: 3183663
Title: Conservation of amino acid sequences between human and porcine choline acetyltransferase.
PubMed ID: 3183663
PubMed ID: 1784419
Title: Isolation and sub-chromosomal localization of a DNA fragment of the human choline acetyltransferase gene.
PubMed ID: 1784419
PubMed ID: 17144655
Title: Substrate binding and catalytic mechanism of human choline acetyltransferase.
PubMed ID: 17144655
DOI: 10.1021/bi061536l
PubMed ID: 12756141
Title: Congenital myasthenic syndrome with episodic apnea in patients homozygous for a CHAT missense mutation.
PubMed ID: 12756141
Sequence Information:
- Length: 748
- Mass: 82536
- Checksum: A902364081915391
- Sequence:
MGLRTAKKRG LGGGGKWKRE EGGGTRGRRE VRPACFLQSG GRGDPGDVGG PAGNPGCSPH PRAATRPPPL PAHTPAHTPE WCGAASAEAA EPRRAGPHLC IPAPGLTKTP ILEKVPRKMA AKTPSSEESG LPKLPVPPLQ QTLATYLQCM RHLVSEEQFR KSQAIVQQFG APGGLGETLQ QKLLERQEKT ANWVSEYWLN DMYLNNRLAL PVNSSPAVIF ARQHFPGTDD QLRFAASLIS GVLSYKALLD SHSIPTDCAK GQLSGQPLCM KQYYGLFSSY RLPGHTQDTL VAQNSSIMPE PEHVIVACCN QFFVLDVVIN FRRLSEGDLF TQLRKIVKMA SNEDERLPPI GLLTSDGRSE WAEARTVLVK DSTNRDSLDM IERCICLVCL DAPGGVELSD THRALQLLHG GGYSKNGANR WYDKSLQFVV GRDGTCGVVC EHSPFDGIVL VQCTEHLLKH VTQSSRKLIR ADSVSELPAP RRLRWKCSPE IQGHLASSAE KLQRIVKNLD FIVYKFDNYG KTFIKKQKCS PDAFIQVALQ LAFYRLHRRL VPTYESASIR RFQEGRVDNI RSATPEALAF VRAVTDHKAA VPASEKLLLL KDAIRAQTAY TVMAITGMAI DNHLLALREL ARAMCKELPE MFMDETYLMS NRFVLSTSQV PTTTEMFCCY GPVVPNGYGA CYNPQPETIL FCISSFHSCK ETSSSKFAKA VEESLIDMRD LCSLLPPTES KPLATKEKAT RPSQGHQP
Genular Protein ID: 1303887906
Symbol: Q6LEN6_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1337937
Title: A complementary DNA for human choline acetyltransferase induces two forms of enzyme with different molecular weights in cultured cells.
PubMed ID: 1337937
PubMed ID: 1400357
Title: Gene expression of mouse choline acetyltransferase. Alternative splicing and identification of a highly active promoter region.
PubMed ID: 1400357
PubMed ID: 8479291
Title: Multiple mRNA species of choline acetyltransferase from rat spinal cord.
PubMed ID: 8479291
PubMed ID: 9073174
Title: Human choline acetyltransferase mRNAs with different 5'-region produce a 69-kDa major translation product.
PubMed ID: 9073174
Sequence Information:
- Length: 138
- Mass: 15355
- Checksum: E760480EC357D2EA
- Sequence:
MAAKTPSSEE SGLPKLPVPP LQQTLATYLQ CMRHLVSEEQ FRKSQAIVQQ FGAPGGLGET LQQKLLERQE KTANWVSEYW LNDMYLNNRL ALPVNSSPAV IFARQHFPGT DDQLRFAASL ISGVLSYKAL LDSHSIPT
Genular Protein ID: 3644719406
Symbol: Q6LEN5_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1337937
Title: A complementary DNA for human choline acetyltransferase induces two forms of enzyme with different molecular weights in cultured cells.
PubMed ID: 1337937
PubMed ID: 1400357
Title: Gene expression of mouse choline acetyltransferase. Alternative splicing and identification of a highly active promoter region.
PubMed ID: 1400357
PubMed ID: 8479291
Title: Multiple mRNA species of choline acetyltransferase from rat spinal cord.
PubMed ID: 8479291
PubMed ID: 7616604
Title: Human choline acetyltransferase gene: localization of alternative first exons.
PubMed ID: 7616604
PubMed ID: 9073174
Title: Human choline acetyltransferase mRNAs with different 5'-region produce a 69-kDa major translation product.
PubMed ID: 9073174
Sequence Information:
- Length: 34
- Mass: 3724
- Checksum: 22E9860105EF4104
- Sequence:
MAAKTPSSEE SGLPKLPVPP LQQTLATYLQ CMRH
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.