Details for: RCC1

Gene ID: 1104

Symbol: RCC1

Ensembl ID: ENSG00000180198

Description: regulator of chromosome condensation 1

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: 2.02
    Marker Score: 2289
  • Cell Name: neural progenitor cell (CL0011020)
    Fold Change: 1.63
    Marker Score: 6328
  • Cell Name: mural cell (CL0008034)
    Fold Change: 1.46
    Marker Score: 167795
  • Cell Name: basal epithelial cell of prostatic duct (CL0002236)
    Fold Change: 1.41
    Marker Score: 1250
  • Cell Name: choroid plexus epithelial cell (CL0000706)
    Fold Change: 1.38
    Marker Score: 1268
  • Cell Name: large pre-B-II cell (CL0000957)
    Fold Change: 1.16
    Marker Score: 3161
  • Cell Name: fraction A pre-pro B cell (CL0002045)
    Fold Change: 1.13
    Marker Score: 1137
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: 1.13
    Marker Score: 7216
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: 1.1
    Marker Score: 2764
  • Cell Name: primitive red blood cell (CL0002355)
    Fold Change: 1.1
    Marker Score: 826
  • Cell Name: proerythroblast (CL0000547)
    Fold Change: 1.08
    Marker Score: 733
  • Cell Name: squamous epithelial cell (CL0000076)
    Fold Change: 1.07
    Marker Score: 726
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: 1.06
    Marker Score: 4407
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 1.03
    Marker Score: 3044
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: 1.03
    Marker Score: 2164.5
  • Cell Name: hematopoietic precursor cell (CL0008001)
    Fold Change: 1.01
    Marker Score: 353
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: 1
    Marker Score: 71727
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: 1
    Marker Score: 47952
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 0.99
    Marker Score: 15892
  • Cell Name: epithelial cell of prostate (CL0002231)
    Fold Change: 0.99
    Marker Score: 686
  • Cell Name: migratory enteric neural crest cell (CL0002607)
    Fold Change: 0.98
    Marker Score: 924
  • Cell Name: absorptive cell (CL0000212)
    Fold Change: 0.98
    Marker Score: 30394
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.95
    Marker Score: 488
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.95
    Marker Score: 2402
  • Cell Name: Unknown (CL0000548)
    Fold Change: 0.94
    Marker Score: 688
  • Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
    Fold Change: 0.94
    Marker Score: 444
  • Cell Name: transit amplifying cell (CL0009010)
    Fold Change: 0.92
    Marker Score: 5246
  • Cell Name: primordial germ cell (CL0000670)
    Fold Change: 0.91
    Marker Score: 1145.5
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 0.91
    Marker Score: 2712
  • Cell Name: osteoclast (CL0000092)
    Fold Change: 0.88
    Marker Score: 440
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.87
    Marker Score: 5294
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.86
    Marker Score: 311
  • Cell Name: granulocyte monocyte progenitor cell (CL0000557)
    Fold Change: 0.86
    Marker Score: 548
  • Cell Name: neural crest cell (CL0011012)
    Fold Change: 0.86
    Marker Score: 917
  • Cell Name: smooth muscle cell of prostate (CL1000487)
    Fold Change: 0.86
    Marker Score: 218
  • Cell Name: ovarian surface epithelial cell (CL2000064)
    Fold Change: 0.85
    Marker Score: 2321
  • Cell Name: malignant cell (CL0001064)
    Fold Change: 0.83
    Marker Score: 11186
  • Cell Name: late promyelocyte (CL0002151)
    Fold Change: 0.83
    Marker Score: 208
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: 0.83
    Marker Score: 1340
  • Cell Name: contractile cell (CL0000183)
    Fold Change: 0.82
    Marker Score: 444
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.82
    Marker Score: 12808
  • Cell Name: plasmablast (CL0000980)
    Fold Change: 0.82
    Marker Score: 1087
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: 0.82
    Marker Score: 3337
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 0.81
    Marker Score: 1379
  • Cell Name: mature alpha-beta T cell (CL0000791)
    Fold Change: 0.81
    Marker Score: 42820
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.8
    Marker Score: 321
  • Cell Name: early T lineage precursor (CL0002425)
    Fold Change: 0.78
    Marker Score: 596
  • Cell Name: epicardial adipocyte (CL1000309)
    Fold Change: 0.78
    Marker Score: 378
  • Cell Name: endothelial cell of vascular tree (CL0002139)
    Fold Change: 0.78
    Marker Score: 1128
  • Cell Name: follicular B cell (CL0000843)
    Fold Change: 0.77
    Marker Score: 838.5
  • Cell Name: epithelial cell of nephron (CL1000449)
    Fold Change: 0.77
    Marker Score: 1613
  • Cell Name: naive thymus-derived CD4-positive, alpha-beta T cell (CL0000895)
    Fold Change: 0.77
    Marker Score: 1322
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: 0.77
    Marker Score: 1132.5
  • Cell Name: stem cell (CL0000034)
    Fold Change: 0.77
    Marker Score: 1822
  • Cell Name: mature gamma-delta T cell (CL0000800)
    Fold Change: 0.75
    Marker Score: 2361
  • Cell Name: subcutaneous fat cell (CL0002521)
    Fold Change: 0.74
    Marker Score: 272
  • Cell Name: Cajal-Retzius cell (CL0000695)
    Fold Change: 0.73
    Marker Score: 380
  • Cell Name: oogonial cell (CL0000024)
    Fold Change: 0.71
    Marker Score: 1025
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 0.71
    Marker Score: 2797
  • Cell Name: thymocyte (CL0000893)
    Fold Change: 0.71
    Marker Score: 744
  • Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
    Fold Change: 0.71
    Marker Score: 443
  • Cell Name: preosteoblast (CL0007010)
    Fold Change: 0.7
    Marker Score: 198
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 0.69
    Marker Score: 2908
  • Cell Name: mesothelial cell (CL0000077)
    Fold Change: 0.69
    Marker Score: 278
  • Cell Name: brush cell (CL0002204)
    Fold Change: 0.69
    Marker Score: 632
  • Cell Name: club cell (CL0000158)
    Fold Change: 0.69
    Marker Score: 807
  • Cell Name: CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell (CL0000915)
    Fold Change: 0.69
    Marker Score: 977
  • Cell Name: respiratory epithelial cell (CL0002368)
    Fold Change: 0.69
    Marker Score: 378
  • Cell Name: Leydig cell (CL0000178)
    Fold Change: 0.68
    Marker Score: 729
  • Cell Name: nasal mucosa goblet cell (CL0002480)
    Fold Change: 0.68
    Marker Score: 452
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: 0.68
    Marker Score: 173
  • Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
    Fold Change: 0.67
    Marker Score: 1571
  • Cell Name: erythroid progenitor cell (CL0000038)
    Fold Change: 0.66
    Marker Score: 691
  • Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
    Fold Change: 0.66
    Marker Score: 395.5
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 0.65
    Marker Score: 4210.5
  • Cell Name: erythroblast (CL0000765)
    Fold Change: 0.65
    Marker Score: 403.5
  • Cell Name: bronchial epithelial cell (CL0002328)
    Fold Change: 0.65
    Marker Score: 171
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: 0.64
    Marker Score: 267
  • Cell Name: luminal epithelial cell of mammary gland (CL0002326)
    Fold Change: 0.64
    Marker Score: 1136
  • Cell Name: activated CD4-positive, alpha-beta T cell (CL0000896)
    Fold Change: 0.64
    Marker Score: 461
  • Cell Name: early lymphoid progenitor (CL0000936)
    Fold Change: 0.64
    Marker Score: 312
  • Cell Name: kidney interstitial cell (CL1000500)
    Fold Change: 0.63
    Marker Score: 451
  • Cell Name: centrocyte (CL0009111)
    Fold Change: 0.63
    Marker Score: 150
  • Cell Name: cortical thymic epithelial cell (CL0002364)
    Fold Change: 0.63
    Marker Score: 2331
  • Cell Name: intestinal crypt stem cell of large intestine (CL0009016)
    Fold Change: 0.63
    Marker Score: 188
  • Cell Name: promyelocyte (CL0000836)
    Fold Change: 0.62
    Marker Score: 309
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 0.62
    Marker Score: 6307
  • Cell Name: mononuclear cell (CL0000842)
    Fold Change: 0.62
    Marker Score: 200
  • Cell Name: skeletal muscle fibroblast (CL0011027)
    Fold Change: 0.62
    Marker Score: 407.5
  • Cell Name: Unknown (CL0002371)
    Fold Change: 0.62
    Marker Score: 657
  • Cell Name: retinal ganglion cell (CL0000740)
    Fold Change: 0.62
    Marker Score: 767
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.61
    Marker Score: 6904.5
  • Cell Name: B-1 B cell (CL0000819)
    Fold Change: 0.61
    Marker Score: 1067
  • Cell Name: decidual cell (CL2000002)
    Fold Change: 0.61
    Marker Score: 2639
  • Cell Name: ciliated cell (CL0000064)
    Fold Change: 0.61
    Marker Score: 2102
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.61
    Marker Score: 21043
  • Cell Name: enteric smooth muscle cell (CL0002504)
    Fold Change: 0.61
    Marker Score: 1424
  • Cell Name: precursor B cell (CL0000817)
    Fold Change: 0.6
    Marker Score: 399
  • Cell Name: mesodermal cell (CL0000222)
    Fold Change: 0.58
    Marker Score: 7710
  • Cell Name: extravillous trophoblast (CL0008036)
    Fold Change: 0.58
    Marker Score: 519

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Other Information

**Key characteristics:** * RCC1 is a protein with a molecular weight of approximately 120 kDa. * It is a transmembrane protein that is localized to the nuclear envelope. * RCC1 is a GTPase that is involved in the regulation of cell cycle progression and the maintenance of genomic integrity. **Pathways and functions:** * RCC1 is involved in the late phase of the cell cycle, where it regulates the disassembly of the nuclear envelope and the reassembly of the nuclear pore complex. * It is also involved in the mitotic and meiotic phases of the cell cycle. * RCC1 is a key regulator of the replication of the human immunodeficiency virus (HIV) genome. * It binds to the HIV genome and facilitates the release of viral RNA from the host cell. * RCC1 also modulates the expression of genes involved in HIV replication. **Clinical significance:** * Mutations in the RCC1 gene have been linked to the development of several human diseases, including immunodeficiency disorders. * In one study, mutations in the RCC1 gene were found in 20% of patients with severe combined immunodeficiency (SCID). * These mutations were associated with a decreased production of RCC1 protein, which led to the accumulation of nuclear DNA in cells. * This can result in the activation of oncogenes and the development of cancer. RCC1 is a critical protein that plays a vital role in maintaining genomic integrity and preventing the replication of retroviruses like HIV. Understanding the function of RCC1 could lead to the development of new therapies for HIV infection and other retroviral diseases.

Genular Protein ID: 3790097226

Symbol: RCC1_HUMAN

Name: Regulator of chromosome condensation

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 3678831

Title: Isolation and characterization of the active cDNA of the human cell cycle gene (RCC1) involved in the regulation of onset of chromosome condensation.

PubMed ID: 3678831

DOI: 10.1101/gad.1.6.585

PubMed ID: 1769659

Title: Complete nucleotide sequence of the human RCC1 gene involved in coupling between DNA replication and mitosis.

PubMed ID: 1769659

DOI: 10.1016/0888-7543(91)90156-9

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 7983178

Title: Mammalian cells have two functional RCC1 proteins produced by alternative splicing.

PubMed ID: 7983178

DOI: 10.1242/jcs.107.8.2203

PubMed ID: 2236072

Title: A 47-kDa human nuclear protein recognized by antikinetochore autoimmune sera is homologous with the protein encoded by RCC1, a gene implicated in onset of chromosome condensation.

PubMed ID: 2236072

DOI: 10.1073/pnas.87.21.8617

PubMed ID: 1944575

Title: Catalysis of guanine nucleotide exchange on Ran by the mitotic regulator RCC1.

PubMed ID: 1944575

DOI: 10.1038/354080a0

PubMed ID: 12194828

Title: Targeting of RCC1 to chromosomes is required for proper mitotic spindle assembly in human cells.

PubMed ID: 12194828

DOI: 10.1016/s0960-9822(02)01076-x

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 16820410

Title: Novel function of beta-arrestin2 in the nucleus of mature spermatozoa.

PubMed ID: 16820410

DOI: 10.1242/jcs.03046

PubMed ID: 17435751

Title: N-terminal alpha-methylation of RCC1 is necessary for stable chromatin association and normal mitosis.

PubMed ID: 17435751

DOI: 10.1038/ncb1572

PubMed ID: 18762580

Title: Regulation of chromatin binding by a conformational switch in the tail of the Ran exchange factor RCC1.

PubMed ID: 18762580

DOI: 10.1083/jcb.200803110

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 20668449

Title: NRMT is an alpha-N-methyltransferase that methylates RCC1 and retinoblastoma protein.

PubMed ID: 20668449

DOI: 10.1038/nature09343

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 22215983

Title: Mitotic spindle assembly around RCC1-coated beads in Xenopus egg extracts.

PubMed ID: 22215983

DOI: 10.1371/journal.pbio.1001225

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 29040603

Title: Mitosis-specific acetylation tunes Ran effector binding for chromosome segregation.

PubMed ID: 29040603

DOI: 10.1093/jmcb/mjx045

PubMed ID: 34564892

Title: Dominant KPNA3 Mutations Cause Infantile-Onset Hereditary Spastic Paraplegia.

PubMed ID: 34564892

DOI: 10.1002/ana.26228

PubMed ID: 9510255

Title: The 1.7-A crystal structure of the regulator of chromosome condensation (RCC1) reveals a seven-bladed propeller.

PubMed ID: 9510255

DOI: 10.1038/32204

PubMed ID: 11336674

Title: Structural basis for guanine nucleotide exchange on Ran by the regulator of chromosome condensation (RCC1).

PubMed ID: 11336674

DOI: 10.1016/s0092-8674(01)00315-4

PubMed ID: 29042532

Title: Three-dimensional context rather than NLS amino acid sequence determines importin alpha subtype specificity for RCC1.

PubMed ID: 29042532

DOI: 10.1038/s41467-017-01057-7

Sequence Information:

  • Length: 421
  • Mass: 44969
  • Checksum: F6D225AF81928305
  • Sequence:
  • MSPKRIAKRR SPPADAIPKS KKVKVSHRSH STEPGLVLTL GQGDVGQLGL GENVMERKKP 
    ALVSIPEDVV QAEAGGMHTV CLSKSGQVYS FGCNDEGALG RDTSVEGSEM VPGKVELQEK 
    VVQVSAGDSH TAALTDDGRV FLWGSFRDNN GVIGLLEPMK KSMVPVQVQL DVPVVKVASG 
    NDHLVMLTAD GDLYTLGCGE QGQLGRVPEL FANRGGRQGL ERLLVPKCVM LKSRGSRGHV 
    RFQDAFCGAY FTFAISHEGH VYGFGLSNYH QLGTPGTESC FIPQNLTSFK NSTKSWVGFS 
    GGQHHTVCMD SEGKAYSLGR AEYGRLGLGE GAEEKSIPTL ISRLPAVSSV ACGASVGYAV 
    TKDGRVFAWG MGTNYQLGTG QDEDAWSPVE MMGKQLENRV VLSVSSGGQH TVLLVKDKEQ 
    S

Genular Protein ID: 3876311110

Symbol: A0A0S2Z404_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 26871637

Title: Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.

PubMed ID: 26871637

DOI: 10.1016/j.cell.2016.01.029

Sequence Information:

  • Length: 452
  • Mass: 48146
  • Checksum: A31255E99A01A25F
  • Sequence:
  • MSPKRIAKRR SPPADAIPKS KKVKDTRAAA SRRVPGARSC QGACGPSPPD QKTRPVSHRS 
    HSTEPGLVLT LGQGDVGQLG LGENVMERKK PALVSIPEDV VQAEAGGMHT VCLSKSGQVY 
    SFGCNDEGAL GRDTSVEGSE MVPGKVELQE KVVQVSAGDS HTAALTDDGR VFLWGSFRDN 
    NGVIGLLEPM KKSMVPVQVQ LDVPVVKVAS GNDHLVMLTA DGDLYTLGCG EQGQLGRVPE 
    LFANRGGRQG LERLLVPKCV MLKSRGSRGH VRFQDAFCGA YFTFAISHEG HVYGFGLSNY 
    HQLGTPGTES CFIPQNLTSF KNSTKSWVGF SGGQHHTVCM DSEGKAYSLG RAEYGRLGLG 
    EGAEEKSIPT LISRLPAVSS VACGASVGYA VTKDGRVFAW GMGTNYQLGT GQDEDAWSPV 
    EMMGKQLENR VVLSVSSGGQ HTVLLVKDKE QS

Genular Protein ID: 1865271710

Symbol: A0A0S2Z3I4_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 26871637

Title: Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.

PubMed ID: 26871637

DOI: 10.1016/j.cell.2016.01.029

Sequence Information:

  • Length: 438
  • Mass: 46753
  • Checksum: 223B8046E301E535
  • Sequence:
  • MSPKRIAKRR SPPADAIPKS KKVKDTRAAA SRRVPGARSC QVSHRSHSTE PGLVLTLGQG 
    DVGQLGLGEN VMERKKPALV SIPEDVVQAE AGGMHTVCLS KSGQVYSFGC NDEGALGRDT 
    SVEGSEMVPG KVELQEKVVQ VSAGDSHTAA LTDDGRVFLW GSFRDNNGVI GLLEPMKKSM 
    VPVQVQLDVP VVKVASGNDH LVMLTADGDL YTLGCGEQGQ LGRVPELFAN RGGRQGLERL 
    LVPKCVMLKS RGSRGHVRFQ DAFCGAYFTF AISHEGHVYG FGLSNYHQLG TPGTESCFIP 
    QNLTSFKNST KSWVGFSGGQ HHTVCMDSEG KAYSLGRAEY GRLGLGEGAE EKSIPTLISR 
    LPAVSSVACG ASVGYAVTKD GRVFAWGMGT NYQLGTGQDE DAWSPVEMMG KQLENRVVLS 
    VSSGGQHTVL LVKDKEQS

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.