Details for: LDB3
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: cell of skeletal muscle (CL0000188)
Fold Change: 7.79
Marker Score: 5,924 - Cell Name: regular ventricular cardiac myocyte (CL0002131)
Fold Change: 5.41
Marker Score: 120,992 - Cell Name: regular atrial cardiac myocyte (CL0002129)
Fold Change: 3.99
Marker Score: 14,173 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: 3.31
Marker Score: 44,018 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 3.1
Marker Score: 6,801 - Cell Name: contractile cell (CL0000183)
Fold Change: 2.53
Marker Score: 1,370 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 2.39
Marker Score: 5,991 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: 2.24
Marker Score: 706 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 1.91
Marker Score: 11,486 - Cell Name: renal interstitial pericyte (CL1001318)
Fold Change: 1.82
Marker Score: 1,731 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: 1.78
Marker Score: 4,273 - Cell Name: fetal cardiomyocyte (CL0002495)
Fold Change: 1.71
Marker Score: 564 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.61
Marker Score: 1,167 - Cell Name: mural cell (CL0008034)
Fold Change: 1.47
Marker Score: 169,092 - Cell Name: lymphocyte (CL0000542)
Fold Change: 1.4
Marker Score: 709 - Cell Name: granulocyte monocyte progenitor cell (CL0000557)
Fold Change: 1.37
Marker Score: 868 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.36
Marker Score: 21,224 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 1.26
Marker Score: 853 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 1.17
Marker Score: 486 - Cell Name: interneuron (CL0000099)
Fold Change: 1.17
Marker Score: 533 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 1.15
Marker Score: 4,810 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 1.09
Marker Score: 502 - Cell Name: endothelial cell of artery (CL1000413)
Fold Change: 1.05
Marker Score: 435 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71,818 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 48,043 - Cell Name: renal beta-intercalated cell (CL0002201)
Fold Change: 0.99
Marker Score: 314 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.99
Marker Score: 508 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30,409 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.98
Marker Score: 462 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 0.97
Marker Score: 1,976 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2,413 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.93
Marker Score: 5,313 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.93
Marker Score: 373 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.93
Marker Score: 442 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.92
Marker Score: 2,742 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.91
Marker Score: 326 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5,287 - Cell Name: kidney interstitial cell (CL1000500)
Fold Change: 0.85
Marker Score: 608 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.84
Marker Score: 1,988 - Cell Name: tracheobronchial smooth muscle cell (CL0019019)
Fold Change: 0.81
Marker Score: 237 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 0.8
Marker Score: 999 - Cell Name: connective tissue cell (CL0002320)
Fold Change: 0.8
Marker Score: 207 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.8
Marker Score: 609 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.78
Marker Score: 1,260 - Cell Name: brush cell (CL0002204)
Fold Change: 0.77
Marker Score: 707 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.76
Marker Score: 396 - Cell Name: fast muscle cell (CL0000190)
Fold Change: 0.74
Marker Score: 222 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.72
Marker Score: 461 - Cell Name: muscle cell (CL0000187)
Fold Change: 0.72
Marker Score: 203 - Cell Name: epithelial cell of thymus (CL0002293)
Fold Change: 0.7
Marker Score: 225 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.7
Marker Score: 226 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.69
Marker Score: 178 - Cell Name: smooth muscle cell of prostate (CL1000487)
Fold Change: 0.66
Marker Score: 167 - Cell Name: bronchial smooth muscle cell (CL0002598)
Fold Change: 0.65
Marker Score: 184 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.65
Marker Score: 391 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 0.63
Marker Score: 966 - Cell Name: enteric smooth muscle cell (CL0002504)
Fold Change: 0.59
Marker Score: 1,398 - Cell Name: smooth muscle cell (CL0000192)
Fold Change: 0.56
Marker Score: 368 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 0.56
Marker Score: 148 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.56
Marker Score: 444 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.55
Marker Score: 173 - Cell Name: goblet cell (CL0000160)
Fold Change: 0.54
Marker Score: 3,607 - Cell Name: supporting cell (CL0000630)
Fold Change: 0.54
Marker Score: 1,010 - Cell Name: smooth muscle cell of large intestine (CL1000279)
Fold Change: 0.52
Marker Score: 196 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: 0.51
Marker Score: 271 - Cell Name: epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.51
Marker Score: 227 - Cell Name: fat cell (CL0000136)
Fold Change: 0.5
Marker Score: 278 - Cell Name: pyramidal neuron (CL0000598)
Fold Change: 0.49
Marker Score: 817 - Cell Name: adipocyte of epicardial fat of left ventricle (CL1000311)
Fold Change: 0.45
Marker Score: 119 - Cell Name: pericyte (CL0000669)
Fold Change: 0.43
Marker Score: 249 - Cell Name: kidney capillary endothelial cell (CL1000892)
Fold Change: 0.39
Marker Score: 123 - Cell Name: neuronal receptor cell (CL0000006)
Fold Change: 0.37
Marker Score: 165 - Cell Name: ganglion interneuron (CL0000397)
Fold Change: 0.37
Marker Score: 112 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 0.36
Marker Score: 177 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 0.35
Marker Score: 1,374 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 0.35
Marker Score: 148 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: 0.35
Marker Score: 985 - Cell Name: slow muscle cell (CL0000189)
Fold Change: 0.34
Marker Score: 112 - Cell Name: ventricular cardiac muscle cell (CL2000046)
Fold Change: 0.33
Marker Score: 137 - Cell Name: mesothelial cell of epicardium (CL0011019)
Fold Change: 0.32
Marker Score: 104 - Cell Name: ON retinal ganglion cell (CL4023032)
Fold Change: 0.32
Marker Score: 88 - Cell Name: vascular associated smooth muscle cell (CL0000359)
Fold Change: 0.32
Marker Score: 147 - Cell Name: melanocyte (CL0000148)
Fold Change: 0.31
Marker Score: 127 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 0.3
Marker Score: 306 - Cell Name: mast cell (CL0000097)
Fold Change: 0.29
Marker Score: 167 - Cell Name: astrocyte (CL0000127)
Fold Change: 0.28
Marker Score: 240 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 0.27
Marker Score: 510 - Cell Name: activated CD8-positive, alpha-beta T cell (CL0000906)
Fold Change: 0.27
Marker Score: 195 - Cell Name: microglial cell (CL0000129)
Fold Change: 0.27
Marker Score: 484 - Cell Name: oligodendrocyte precursor cell (CL0002453)
Fold Change: 0.26
Marker Score: 321 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.26
Marker Score: 169 - Cell Name: OFF retinal ganglion cell (CL4023033)
Fold Change: 0.26
Marker Score: 107 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.25
Marker Score: 15,339 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.24
Marker Score: 241 - Cell Name: myeloid cell (CL0000763)
Fold Change: 0.24
Marker Score: 386 - Cell Name: retinal pigment epithelial cell (CL0002586)
Fold Change: 0.23
Marker Score: 69 - Cell Name: tracheal goblet cell (CL1000329)
Fold Change: 0.23
Marker Score: 655 - Cell Name: endocardial cell (CL0002350)
Fold Change: 0.23
Marker Score: 131 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.23
Marker Score: 66 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 0.23
Marker Score: 137
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 4016980932
Symbol: LDB3_HUMAN
Name: LIM domain-binding protein 3
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10427098
Title: ZASP: a new Z-band alternatively spliced PDZ-motif protein.
PubMed ID: 10427098
PubMed ID: 9734811
Title: Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.
PubMed ID: 9734811
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15164054
Title: The DNA sequence and comparative analysis of human chromosome 10.
PubMed ID: 15164054
DOI: 10.1038/nature02462
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 11842093
Title: Calsarcin-3, a novel skeletal muscle-specific member of the calsarcin family, interacts with multiple Z-disc proteins.
PubMed ID: 11842093
PubMed ID: 15062084
Title: Solution structure of ZASP PDZ domain; implications for sarcomere ultrastructure and enigma family redundancy.
PubMed ID: 15062084
PubMed ID: 14662268
Title: Mutations in Cypher/ZASP in patients with dilated cardiomyopathy and left ventricular non-compaction.
PubMed ID: 14662268
PubMed ID: 14660611
Title: A Cypher/ZASP mutation associated with dilated cardiomyopathy alters the binding affinity to protein kinase C.
PubMed ID: 14660611
PubMed ID: 15668942
Title: Mutations in ZASP define a novel form of muscular dystrophy in humans.
PubMed ID: 15668942
DOI: 10.1002/ana.20376
Sequence Information:
- Length: 727
- Mass: 77135
- Checksum: 67B5B699D2B2AB68
- Sequence:
MSYSVTLTGP GPWGFRLQGG KDFNMPLTIS RITPGSKAAQ SQLSQGDLVV AIDGVNTDTM THLEAQNKIK SASYNLSLTL QKSKRPIPIS TTAPPVQTPL PVIPHQKDPA LDTNGSLVAP SPSPEARASP GTPGTPELRP TFSPAFSRPS AFSSLAEASD PGPPRASLRA KTSPEGARDL LGPKALPGSS QPRQYNNPIG LYSAETLREM AQMYQMSLRG KASGVGLPGG SLPIKDLAVD SASPVYQAVI KSQNKPEDEA DEWARRSSNL QSRSFRILAQ MTGTEFMQDP DEEALRRSST PIEHAPVCTS QATTPLLPAS AQPPAAASPS AASPPLATAA AHTAIASAST TAPASSPADS PRPQASSYSP AVAASSAPAT HTSYSEGPAA PAPKPRVVTT ASIRPSVYQP VPASTYSPSP GANYSPTPYT PSPAPAYTPS PAPAYTPSPV PTYTPSPAPA YTPSPAPNYN PAPSVAYSGG PAEPASRPPW VTDDSFSQKF APGKSTTSIS KQTLPRGGPA YTPAGPQVPP LARGTVQRAE RFPASSRTPL CGHCNNVIRG PFLVAMGRSW HPEEFTCAYC KTSLADVCFV EEQNNVYCER CYEQFFAPLC AKCNTKIMGE VMHALRQTWH TTCFVCAACK KPFGNSLFHM EDGEPYCEKD YINLFSTKCH GCDFPVEAGD KFIEALGHTW HDTCFICAVC HVNLEGQPFY SKKDRPLCKK HAHTINL
Genular Protein ID: 2647594253
Symbol: A0A0S2Z530_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11181995
PubMed ID: 26871637
Title: Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
PubMed ID: 26871637
Sequence Information:
- Length: 283
- Mass: 30999
- Checksum: 099A4472DB4D9258
- Sequence:
MSYSVTLTGP GPWGFRLQGG KDFNMPLTIS RITPGSKAAQ SQLSQGDLVV AIDGVNTDTM THLEAQNKIK SASYNLSLTL QKSKRPIPIS TTAPPVQTPL PVIPHQKVVV NSPANADYQE RFNPSALKDS ALSTHKPIEV KGLGGKATII HAQYNTPISM YSQDAIMDAI AGQAQAQGSD FSGSLPIKDL AVDSASPVYQ AVIKSQNKPE DEADEWARRS SNLQSRSFRI LAQMTGTEFM QDPDEEALRR SRERFETERN SPRFAKLRNW HHGLSAQILN VKS
Genular Protein ID: 2773813693
Symbol: A0A0S2Z501_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 26871637
Title: Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
PubMed ID: 26871637
Sequence Information:
- Length: 330
- Mass: 35637
- Checksum: F6B8A00A6EF9B7E0
- Sequence:
MSYSVTLTGP GPWGFRLQGG KDFNMPLTIS RITPGSKAAQ SQLSQGDLVV AIDGVNTDTM THLEAQNKIK SASYNLSLTL QKSKRPIPIS TTAPPVQTPL PVIPHQKDPA LDTNGSLVAP SPSPEARASP GTPGTPELRP TFSPAFSRPS AFSSLAEASD PGPPRASLRA KTSPEGARDL LGPKALPGSS QPRQYNNPIG LYSAETLREM AQMYQMSLRG KASGVGLPGG SLPIKDLAVD SASPVYQAVI KSQNKPEDEA DEWARRSSNL QSRSFRILAQ MTGTEFMQDP DEEALRRSRE RFETERNSPR FAKLRNWHHG LSAQILNVKS
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.