Details for: CHM
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 304.5738
Cell Significance Index: -47.3800 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 182.1455
Cell Significance Index: -46.2000 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 101.2449
Cell Significance Index: -47.8000 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 88.9338
Cell Significance Index: -36.1300 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 38.5963
Cell Significance Index: -47.5900 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 38.1359
Cell Significance Index: -36.4100 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 16.8393
Cell Significance Index: -45.1100 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 12.1185
Cell Significance Index: -47.8200 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 11.6785
Cell Significance Index: -35.8700 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 8.8367
Cell Significance Index: -19.3400 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.0247
Cell Significance Index: 406.1500 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.9784
Cell Significance Index: 195.7100 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 1.7216
Cell Significance Index: 280.0100 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 1.6248
Cell Significance Index: 1467.0500 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.5652
Cell Significance Index: 561.4100 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.5647
Cell Significance Index: 310.5200 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 1.2868
Cell Significance Index: 79.1000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 1.2040
Cell Significance Index: 67.5600 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 1.0979
Cell Significance Index: 14.9800 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 1.0973
Cell Significance Index: 13.6100 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 1.0816
Cell Significance Index: 25.9400 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 1.0784
Cell Significance Index: 27.7200 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 1.0610
Cell Significance Index: 71.3400 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.9312
Cell Significance Index: 101.2900 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.8548
Cell Significance Index: 591.2300 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.8495
Cell Significance Index: 32.1700 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.8219
Cell Significance Index: 36.3600 - Cell Name: peg cell (CL4033014)
Fold Change: 0.7363
Cell Significance Index: 17.0100 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.6627
Cell Significance Index: 34.5200 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.6305
Cell Significance Index: 37.8500 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.6169
Cell Significance Index: 111.2100 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.5298
Cell Significance Index: 100.8200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.5228
Cell Significance Index: 40.1200 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.5035
Cell Significance Index: 11.0300 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.4572
Cell Significance Index: 249.6900 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.4553
Cell Significance Index: 55.9800 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.4260
Cell Significance Index: 29.4600 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.3505
Cell Significance Index: 48.1300 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.3379
Cell Significance Index: 7.3200 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.3014
Cell Significance Index: 13.6600 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: 0.2711
Cell Significance Index: 5.8000 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 0.2537
Cell Significance Index: 7.2400 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.2128
Cell Significance Index: 5.3200 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.1860
Cell Significance Index: 350.2400 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.1777
Cell Significance Index: 273.6200 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.1763
Cell Significance Index: 3.4400 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.1742
Cell Significance Index: 77.0000 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.1453
Cell Significance Index: 2.4900 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.1364
Cell Significance Index: 3.6600 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.1004
Cell Significance Index: 63.7400 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.0902
Cell Significance Index: 2.6000 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0869
Cell Significance Index: 160.2800 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0806
Cell Significance Index: 36.5700 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0686
Cell Significance Index: 93.3000 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.0536
Cell Significance Index: 2.5000 - Cell Name: odontoblast (CL0000060)
Fold Change: 0.0456
Cell Significance Index: 5.8400 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0097
Cell Significance Index: -7.1100 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0169
Cell Significance Index: -0.4500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0178
Cell Significance Index: -2.5900 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0203
Cell Significance Index: -15.0400 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0383
Cell Significance Index: -23.9000 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0505
Cell Significance Index: -38.2000 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0545
Cell Significance Index: -30.7500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0614
Cell Significance Index: -10.4800 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.0907
Cell Significance Index: -4.7100 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0941
Cell Significance Index: -5.9300 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.1068
Cell Significance Index: -2.9900 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.1094
Cell Significance Index: -7.0600 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1103
Cell Significance Index: -5.7900 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1136
Cell Significance Index: -23.9300 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.1154
Cell Significance Index: -13.2300 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1393
Cell Significance Index: -40.0800 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1412
Cell Significance Index: -14.4200 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.2047
Cell Significance Index: -24.1400 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.2166
Cell Significance Index: -25.2400 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.2480
Cell Significance Index: -17.5400 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.2798
Cell Significance Index: -5.9600 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.2802
Cell Significance Index: -36.2000 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.3068
Cell Significance Index: -31.9500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.3136
Cell Significance Index: -14.7400 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.3279
Cell Significance Index: -37.4300 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.4028
Cell Significance Index: -12.9000 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.4098
Cell Significance Index: -30.5400 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.4331
Cell Significance Index: -34.3000 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.4682
Cell Significance Index: -13.4200 - Cell Name: Hofbauer cell (CL3000001)
Fold Change: -0.4752
Cell Significance Index: -3.8800 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: -0.5048
Cell Significance Index: -7.2600 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.5130
Cell Significance Index: -6.1200 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.5399
Cell Significance Index: -11.2000 - Cell Name: endothelial cell of placenta (CL0009092)
Fold Change: -0.5545
Cell Significance Index: -3.3500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.5627
Cell Significance Index: -15.3200 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: -0.6103
Cell Significance Index: -7.6100 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: -0.6684
Cell Significance Index: -6.1600 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.6775
Cell Significance Index: -23.8100 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.6882
Cell Significance Index: -10.1600 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.7534
Cell Significance Index: -26.1800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.7762
Cell Significance Index: -47.5900 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.7765
Cell Significance Index: -16.4800 - Cell Name: ON midget ganglion cell (CL4033046)
Fold Change: -0.8074
Cell Significance Index: -10.1900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.8177
Cell Significance Index: -26.7700
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3113907263
Symbol: RAE1_HUMAN
Name: Rab proteins geranylgeranyltransferase component A 1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7981670
Title: Cloning and characterization of the human choroideremia gene.
PubMed ID: 7981670
DOI: 10.1093/hmg/3.7.1041
PubMed ID: 15772651
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 1549574
Title: Isolation of a candidate gene for choroideremia.
PubMed ID: 1549574
PubMed ID: 2215697
Title: Cloning of a gene that is rearranged in patients with choroideraemia.
PubMed ID: 2215697
DOI: 10.1038/347674a0
PubMed ID: 1598901
Title: Detection and characterization of point mutations in the choroideremia candidate gene by PCR-SSCP analysis and direct DNA sequencing.
PubMed ID: 1598901
PubMed ID: 1904992
PubMed ID: 7957092
Title: Rab escort protein-1 is a multifunctional protein that accompanies newly prenylated rab proteins to their target membranes.
PubMed ID: 7957092
PubMed ID: 18532927
Title: Rab geranylgeranylation occurs preferentially via the pre-formed REP-RGGT complex and is regulated by geranylgeranyl pyrophosphate.
PubMed ID: 18532927
DOI: 10.1042/bj20080662
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 21905166
Title: Comprehensive mutation analysis (20 families) of the choroideremia gene reveals a missense variant that prevents the binding of REP1 with rab geranylgeranyl transferase.
PubMed ID: 21905166
DOI: 10.1002/humu.21591
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 26824392
Title: Phosphoproteomics reveals that Parkinson's disease kinase LRRK2 regulates a subset of Rab GTPases.
PubMed ID: 26824392
DOI: 10.7554/elife.12813
PubMed ID: 29125462
Title: Systematic proteomic analysis of LRRK2-mediated Rab GTPase phosphorylation establishes a connection to ciliogenesis.
PubMed ID: 29125462
DOI: 10.7554/elife.31012
PubMed ID: 7951216
PubMed ID: 19427510
Title: The functional effect of pathogenic mutations in Rab escort protein 1.
PubMed ID: 19427510
Sequence Information:
- Length: 653
- Mass: 73476
- Checksum: 7CFFAECE7BA1F3AF
- Sequence:
MADTLPSEFD VIVIGTGLPE SIIAAACSRS GRRVLHVDSR SYYGGNWASF SFSGLLSWLK EYQENSDIVS DSPVWQDQIL ENEEAIALSR KDKTIQHVEV FCYASQDLHE DVEEAGALQK NHALVTSANS TEAADSAFLP TEDESLSTMS CEMLTEQTPS SDPENALEVN GAEVTGEKEN HCDDKTCVPS TSAEDMSENV PIAEDTTEQP KKNRITYSQI IKEGRRFNID LVSKLLYSRG LLIDLLIKSN VSRYAEFKNI TRILAFREGR VEQVPCSRAD VFNSKQLTMV EKRMLMKFLT FCMEYEKYPD EYKGYEEITF YEYLKTQKLT PNLQYIVMHS IAMTSETASS TIDGLKATKN FLHCLGRYGN TPFLFPLYGQ GELPQCFCRM CAVFGGIYCL RHSVQCLVVD KESRKCKAII DQFGQRIISE HFLVEDSYFP ENMCSRVQYR QISRAVLITD RSVLKTDSDQ QISILTVPAE EPGTFAVRVI ELCSSTMTCM KGTYLVHLTC TSSKTAREDL ESVVQKLFVP YTEMEIENEQ VEKPRILWAL YFNMRDSSDI SRSCYNDLPS NVYVCSGPDC GLGNDNAVKQ AETLFQEICP NEDFCPPPPN PEDIILDGDS LQPEASESSA IPEANSETFK ESTNLGNLEE SSE
Genular Protein ID: 3829388678
Symbol: B4DRL9_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 505
- Mass: 57265
- Checksum: 15F801C543052012
- Sequence:
MSCEMLTEQT PSSDPENALE VNGAEVTGEK ENHCDDKTCV PSTSAEDMSE NVPIAEDTTE QPKKNRITYS QIIKEGRRFN IDLVSKLLYS RGLLIDLLIK SNVSRYAEFK NITRILAFRE GRVEQVPCSR ADVFNSKQLT MVEKRMLMKF LTFCMEYEKY PDEYKGYEEI TFYEYLKTQK LTPNLQYIVM HSIAMTSETA SSTIDGLKAT KNFLHCLGRY GNTPFLFPLY GQGELPQCFC RMCAVFGGIY CLRHSVQCLV VDKESRKCKA IIDQFGQRII SEHFLVEDSY FPENMCSRVQ YRQISRAVLI TDRSVLKTDS DQQISILTVP AEEPGTFAVR VIELCSSTMT CMKGTYLVHL TCTSSKTARE DLESVVQKLF VPYTEMEIEN EQVEKPRILW ALYFNMRDSS DISRSCYNDL PSNVYVCSGP DCGLGNDNAV KQAETLFQEI CPNEDFCPPP PNPEDIILDG DSLQPEASES SAIPEANSET FKESTNLGNL EESSE
Genular Protein ID: 2027369497
Symbol: A8K545_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 653
- Mass: 73492
- Checksum: ED59BECE7E32A271
- Sequence:
MADTLPSEFD VIVIGTGLPE SIIAAACSRS GRRVLHVDSR SYYGGNWASF SFSGLLSWLK EYQENSDIVS DSPVWQDQIL ENEEAIALCR KDKTIQHVEV FCYASQDLHE DVEEAGALQK NHALVTSANS TEAADSAFLP TEDESLSTMS CEMLTEQTPS SDPENALEVN GAEVTGEKEN HCDDKTCVPS TSAEDMSENV PIAEDTTEQP KKNRITYSQI IKEGRRFNID LVSKLLYSRG LLIDLLIKSN VSRYAEFKNI TRILAFREGR VEQVPCSRAD VFNSKQLTMV EKRMLMKFLT FCMEYEKYPD EYKGYEEITF YEYLKTQKLT PNLQYIVMHS IAMTSETASS TIDGLKATKN FLHCLGRYGN TPFLFPLYGQ GELPQCFCRM CAVFGGIYCL RHSVQCLVVD KESRKCKAII DQFGQRIISE HFLVEDSYFP ENMCSRVQYR QISRAVLITD RSVLKTDSDQ QISILTVPAE EPGTFAVRVI ELCSSTMTCM KGTYLVHLTC TSSKTAREDL ESVVQKLFVP YTEMEIENEQ VEKPRILWAL YFNMRDSSDI SRSCYNDLPS NVYVCSGPDC GLGNDNAVKQ AETLFQEICP NEDFCPPPPN PEDIILDGDS LQPEASESSA IPEANSETFK ESTNLGNLEE SSE
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.