Details for: SYNRG
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: cardiac muscle cell (CL0000746)
Fold Change: 4.01
Marker Score: 53,294 - Cell Name: tracheal goblet cell (CL1000329)
Fold Change: 3.64
Marker Score: 10,265 - Cell Name: kidney proximal convoluted tubule epithelial cell (CL1000838)
Fold Change: 2.98
Marker Score: 6,176 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 2.41
Marker Score: 1,171 - Cell Name: germ cell (CL0000586)
Fold Change: 2.17
Marker Score: 3,791 - Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
Fold Change: 2.17
Marker Score: 2,298 - Cell Name: kidney collecting duct intercalated cell (CL1001432)
Fold Change: 2.02
Marker Score: 3,345 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: 1.96
Marker Score: 1,571 - Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
Fold Change: 1.94
Marker Score: 2,087 - Cell Name: CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL0001203)
Fold Change: 1.89
Marker Score: 5,293 - Cell Name: kidney interstitial fibroblast (CL1000692)
Fold Change: 1.86
Marker Score: 3,583 - Cell Name: DN3 thymocyte (CL0000807)
Fold Change: 1.8
Marker Score: 901 - Cell Name: CD8-positive, alpha-beta cytokine secreting effector T cell (CL0000908)
Fold Change: 1.76
Marker Score: 759 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 1.68
Marker Score: 7,028 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 1.67
Marker Score: 35,692 - Cell Name: kidney collecting duct principal cell (CL1001431)
Fold Change: 1.65
Marker Score: 4,171 - Cell Name: naive thymus-derived CD8-positive, alpha-beta T cell (CL0000900)
Fold Change: 1.65
Marker Score: 2,942 - Cell Name: DN1 thymic pro-T cell (CL0000894)
Fold Change: 1.64
Marker Score: 508 - Cell Name: melanocyte (CL0000148)
Fold Change: 1.59
Marker Score: 644 - Cell Name: kidney connecting tubule epithelial cell (CL1000768)
Fold Change: 1.58
Marker Score: 2,230 - Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.56
Marker Score: 6,016 - Cell Name: CD8-positive, alpha-beta memory T cell (CL0000909)
Fold Change: 1.54
Marker Score: 1,311 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 1.53
Marker Score: 56,536 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 1.53
Marker Score: 14,381 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 1.51
Marker Score: 884 - Cell Name: lens fiber cell (CL0011004)
Fold Change: 1.51
Marker Score: 477 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 1.51
Marker Score: 57,232 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.47
Marker Score: 90,199 - Cell Name: Schwann cell (CL0002573)
Fold Change: 1.46
Marker Score: 507 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 1.45
Marker Score: 3,181 - Cell Name: central memory CD8-positive, alpha-beta T cell (CL0000907)
Fold Change: 1.42
Marker Score: 3,472 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 1.42
Marker Score: 13,515 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 1.42
Marker Score: 1,569 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 1.41
Marker Score: 21,151 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 1.41
Marker Score: 843 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 1.39
Marker Score: 1,600 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: 1.39
Marker Score: 27,632 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 1.38
Marker Score: 11,892 - Cell Name: decidual natural killer cell, human (CL0002343)
Fold Change: 1.38
Marker Score: 3,820 - Cell Name: interneuron (CL0000099)
Fold Change: 1.38
Marker Score: 631 - Cell Name: CD4-positive, alpha-beta cytotoxic T cell (CL0000934)
Fold Change: 1.37
Marker Score: 1,203 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 1.35
Marker Score: 5,579 - Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
Fold Change: 1.34
Marker Score: 750 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 1.34
Marker Score: 2,071 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 1.33
Marker Score: 389 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 1.33
Marker Score: 1,605 - Cell Name: central nervous system macrophage (CL0000878)
Fold Change: 1.32
Marker Score: 656 - Cell Name: naive thymus-derived CD4-positive, alpha-beta T cell (CL0000895)
Fold Change: 1.31
Marker Score: 2,254 - Cell Name: squamous epithelial cell (CL0000076)
Fold Change: 1.31
Marker Score: 894 - Cell Name: renal alpha-intercalated cell (CL0005011)
Fold Change: 1.31
Marker Score: 691 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 1.31
Marker Score: 10,020 - Cell Name: mature gamma-delta T cell (CL0000800)
Fold Change: 1.3
Marker Score: 4,092 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 1.29
Marker Score: 778 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 1.28
Marker Score: 1,721 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: 1.28
Marker Score: 745 - Cell Name: OFF retinal ganglion cell (CL4023033)
Fold Change: 1.27
Marker Score: 533 - Cell Name: B-1 B cell (CL0000819)
Fold Change: 1.27
Marker Score: 2,215 - Cell Name: regular ventricular cardiac myocyte (CL0002131)
Fold Change: 1.24
Marker Score: 27,751 - Cell Name: regular atrial cardiac myocyte (CL0002129)
Fold Change: 1.23
Marker Score: 4,367 - Cell Name: alpha-beta T cell (CL0000789)
Fold Change: 1.21
Marker Score: 918 - Cell Name: CD16-negative, CD56-bright natural killer cell, human (CL0000938)
Fold Change: 1.2
Marker Score: 982 - Cell Name: effector memory CD8-positive, alpha-beta T cell, terminally differentiated (CL0001062)
Fold Change: 1.2
Marker Score: 1,765 - Cell Name: memory regulatory T cell (CL0002678)
Fold Change: 1.2
Marker Score: 418 - Cell Name: mature alpha-beta T cell (CL0000791)
Fold Change: 1.2
Marker Score: 63,214 - Cell Name: fat cell (CL0000136)
Fold Change: 1.19
Marker Score: 664 - Cell Name: retinal pigment epithelial cell (CL0002586)
Fold Change: 1.18
Marker Score: 348 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 1.17
Marker Score: 1,218 - Cell Name: memory B cell (CL0000787)
Fold Change: 1.16
Marker Score: 880 - Cell Name: naive regulatory T cell (CL0002677)
Fold Change: 1.15
Marker Score: 349 - Cell Name: CD56-positive, CD161-positive immature natural killer cell, human (CL0002338)
Fold Change: 1.15
Marker Score: 378 - Cell Name: podocyte (CL0000653)
Fold Change: 1.14
Marker Score: 420 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 1.13
Marker Score: 271 - Cell Name: class switched memory B cell (CL0000972)
Fold Change: 1.12
Marker Score: 1,057 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 1.11
Marker Score: 1,633 - Cell Name: Unknown (CL0000548)
Fold Change: 1.11
Marker Score: 807 - Cell Name: epithelial cell of prostate (CL0002231)
Fold Change: 1.1
Marker Score: 763 - Cell Name: activated CD8-positive, alpha-beta T cell (CL0000906)
Fold Change: 1.1
Marker Score: 795 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 1.08
Marker Score: 4,000 - Cell Name: CD4-positive helper T cell (CL0000492)
Fold Change: 1.07
Marker Score: 1,167 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: 1.07
Marker Score: 337 - Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
Fold Change: 1.07
Marker Score: 234 - Cell Name: mesenchymal lymphangioblast (CL0005021)
Fold Change: 1.07
Marker Score: 238 - Cell Name: hepatic stellate cell (CL0000632)
Fold Change: 1.06
Marker Score: 400 - Cell Name: Bergmann glial cell (CL0000644)
Fold Change: 1.06
Marker Score: 433 - Cell Name: oogonial cell (CL0000024)
Fold Change: 1.05
Marker Score: 1,515 - Cell Name: lymphocyte (CL0000542)
Fold Change: 1.05
Marker Score: 531 - Cell Name: mature microglial cell (CL0002629)
Fold Change: 1.05
Marker Score: 378 - Cell Name: effector CD4-positive, alpha-beta T cell (CL0001044)
Fold Change: 1.04
Marker Score: 978 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 1.04
Marker Score: 959 - Cell Name: progenitor cell of endocrine pancreas (CL0002351)
Fold Change: 1.03
Marker Score: 225 - Cell Name: cardiac mesenchymal cell (CL0000569)
Fold Change: 1.03
Marker Score: 254 - Cell Name: epithelial cell of stratum germinativum of esophagus (CL1000447)
Fold Change: 1.03
Marker Score: 249 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 1.03
Marker Score: 1,284 - Cell Name: centroblast (CL0009112)
Fold Change: 1.03
Marker Score: 507 - Cell Name: ON retinal ganglion cell (CL4023032)
Fold Change: 1.03
Marker Score: 281 - Cell Name: endothelial cell of pericentral hepatic sinusoid (CL0019022)
Fold Change: 1.03
Marker Score: 1,101 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 1.03
Marker Score: 770 - Cell Name: small pre-B-II cell (CL0000954)
Fold Change: 1.02
Marker Score: 1,223 - Cell Name: ependymal cell (CL0000065)
Fold Change: 1.02
Marker Score: 355 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 1.02
Marker Score: 3,019
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1515479715
Symbol: SYNRG_HUMAN
Name: Synergin gamma
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10477754
Title: Gamma-synergin: an EH domain-containing protein that interacts with gamma-adaptin.
PubMed ID: 10477754
PubMed ID: 16625196
Title: DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.
PubMed ID: 16625196
DOI: 10.1038/nature04689
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 10814529
Title: Adaptor gamma ear homology domain conserved in gamma-adaptin and GGA proteins that interact with gamma-synergin.
PubMed ID: 10814529
PubMed ID: 12538641
Title: EpsinR: an AP1/clathrin interacting protein involved in vesicle trafficking.
PubMed ID: 12538641
PubMed ID: 14665628
Title: Definition of the consensus motif recognized by gamma-adaptin ear domains.
PubMed ID: 14665628
PubMed ID: 15758025
PubMed ID: 18088087
PubMed ID: 18691976
Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.
PubMed ID: 18691976
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19369195
Title: Large-scale proteomics analysis of the human kinome.
PubMed ID: 19369195
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 28397838
Title: Mapping autosomal recessive intellectual disability: combined microarray and exome sequencing identifies 26 novel candidate genes in 192 consanguineous families.
PubMed ID: 28397838
DOI: 10.1038/mp.2017.60
Sequence Information:
- Length: 1314
- Mass: 140654
- Checksum: 70C105203EF0BBBF
- Sequence:
MALRPGAGSG GGGAAGAGAG SAGGGGFMFP VAGGIRPPQA GLMPMQQQGF PMVSVMQPNM QGIMGMNYSS QMSQGPIAMQ AGIPMGPMPA AGMPYLGQAP FLGMRPPGPQ YTPDMQKQFA EEQQKRFEQQ QKLLEEERKR RQFEEQKQKL RLLSSVKPKT GEKSRDDALE AIKGNLDGFS RDAKMHPTPA SHPKKPGPSL EEKFLVSCDI STSGQEQIKL NTSEVGHKAL GPGSSKKYPS LMASNGVAVD GCVSGTTTAE AENTSDQNLS IEESGVGVFP SQDPAQPRMP PWIYNESLVP DAYKKILETT MTPTGIDTAK LYPILMSSGL PRETLGQIWA LANRTTPGKL TKEELYTVLA MIAVTQRGVP AMSPDALNQF PAAPIPTLSG FSMTLPTPVS QPTVIPSGPA GSMPLSLGQP VMGINLVGPV GGAAAQASSG FIPTYPANQV VKPEEDDFQD FQDASKSGSL DDSFSDFQEL PASSKTSNSQ HGNSAPSLLM PLPGTKALPS MDKYAVFKGI AADKSSENTV PPGDPGDKYS AFRELEQTAE NKPLGESFAE FRSAGTDDGF TDFKTADSVS PLEPPTKDKT FPPSFPSGTI QQKQQTQVKN PLNLADLDMF SSVNCSSEKP LSFSAVFSTS KSVSTPQSTG SAATMTALAA TKTSSLADDF GEFSLFGEYS GLAPVGEQDD FADFMAFSNS SISSEQKPDD KYDALKEEAS PVPLTSNVGS TVKGGQNSTA ASTKYDVFRQ LSLEGSGLGV EDLKDNTPSG KSDDDFADFH SSKFSSINSD KSLGEKAVAF RHTKEDSASV KSLDLPSIGG SSVGKEDSED ALSVQFDMKL ADVGGDLKHV MSDSSLDLPT VSGQHPPAAD IEDLKYAAFG SYSSNFAVST LTSYDWSDRD DATQGRKLSP FVLSAGSGSP SATSILQKKE TSFGSSENIT MTSLSKVTTF VSEDALPETT FPALASFKDT IPQTSEQKEY ENRDYKDFTK QDLPTAERSQ EATCPSPASS GASQETPNEC SDDFGEFQSE KPKISKFDFL VATSQSKMKS SEEMIKSELA TFDLSVQGSH KRSLSLGDKE ISRSSPSPAL EQPFRDRSNT LNEKPALPVI RDKYKDLTGE VEENERYAYE WQRCLGSALN VIKKANDTLN GISSSSVCTE VIQSAQGMEY LLGVVEVYRV TKRVELGIKA TAVCSEKLQQ LLKDIDKVWN NLIGFMSLAT LTPDENSLDF SSCMLRPGIK NAQELACGVC LLNVDSRSRK EEKPAEEHPK KAFNSETDSF KLAYGGHQYH ASCANFWINC VEPKPPGLVL PDLL
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.