Details for: CHRNA4
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 2.4467
Cell Significance Index: 703.9800 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.4941
Cell Significance Index: 10.8200 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: 0.4052
Cell Significance Index: 9.8200 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.3188
Cell Significance Index: 114.3300 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.1762
Cell Significance Index: 9.2500 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.1431
Cell Significance Index: 28.7100 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.1028
Cell Significance Index: 20.4100 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.0306
Cell Significance Index: 0.3800 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0144
Cell Significance Index: 9.9900 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0001
Cell Significance Index: 0.1800 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0049
Cell Significance Index: -9.3200 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0061
Cell Significance Index: -9.3300 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0076
Cell Significance Index: -10.2700 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0085
Cell Significance Index: -5.4200 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0123
Cell Significance Index: -9.0900 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0146
Cell Significance Index: -10.6900 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0155
Cell Significance Index: -8.7400 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0181
Cell Significance Index: -9.8700 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0235
Cell Significance Index: -10.6700 - Cell Name: glutamatergic neuron (CL0000679)
Fold Change: -0.0422
Cell Significance Index: -0.4600 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0453
Cell Significance Index: -9.5400 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0556
Cell Significance Index: -9.5000 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0568
Cell Significance Index: -3.5800 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.0632
Cell Significance Index: -0.9100 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0656
Cell Significance Index: -4.0300 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0676
Cell Significance Index: -9.2800 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0720
Cell Significance Index: -10.4700 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0789
Cell Significance Index: -9.1900 - Cell Name: keratocyte (CL0002363)
Fold Change: -0.0845
Cell Significance Index: -1.3400 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0852
Cell Significance Index: -5.7300 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1018
Cell Significance Index: -10.4000 - Cell Name: neuron (CL0000540)
Fold Change: -0.1192
Cell Significance Index: -1.1300 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.1205
Cell Significance Index: -3.4400 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1247
Cell Significance Index: -7.0000 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.1288
Cell Significance Index: -2.1700 - Cell Name: neural cell (CL0002319)
Fold Change: -0.1354
Cell Significance Index: -1.5800 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.1530
Cell Significance Index: -3.3100 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.1554
Cell Significance Index: -9.5300 - Cell Name: retinal bipolar neuron (CL0000748)
Fold Change: -0.1724
Cell Significance Index: -2.0900 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.1793
Cell Significance Index: -4.3000 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.1823
Cell Significance Index: -2.6900 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.1872
Cell Significance Index: -6.1300 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.1915
Cell Significance Index: -6.1000 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.2017
Cell Significance Index: -10.5100 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: -0.2054
Cell Significance Index: -1.7000 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.2075
Cell Significance Index: -9.1800 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.2087
Cell Significance Index: -4.1900 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.2095
Cell Significance Index: -7.3400 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.2262
Cell Significance Index: -10.6300 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.2265
Cell Significance Index: -5.6500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.2326
Cell Significance Index: -6.3300 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.2453
Cell Significance Index: -9.2900 - Cell Name: hippocampal interneuron (CL1001569)
Fold Change: -0.2668
Cell Significance Index: -3.4600 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.2803
Cell Significance Index: -9.7400 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.2837
Cell Significance Index: -5.6100 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: -0.3089
Cell Significance Index: -6.0800 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.3163
Cell Significance Index: -6.6200 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.3239
Cell Significance Index: -6.7600 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.3256
Cell Significance Index: -9.3800 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: -0.3281
Cell Significance Index: -4.1400 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.3291
Cell Significance Index: -10.4100 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.3402
Cell Significance Index: -7.2200 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.3431
Cell Significance Index: -5.8800 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.3500
Cell Significance Index: -10.3100 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.3656
Cell Significance Index: -10.4800 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.3678
Cell Significance Index: -9.3700 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.3761
Cell Significance Index: -9.8900 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.3766
Cell Significance Index: -10.0900 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.3842
Cell Significance Index: -10.2600 - Cell Name: retina horizontal cell (CL0000745)
Fold Change: -0.3903
Cell Significance Index: -4.9000 - Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
Fold Change: -0.3912
Cell Significance Index: -7.8000 - Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
Fold Change: -0.3916
Cell Significance Index: -6.7500 - Cell Name: erythroid progenitor cell (CL0000038)
Fold Change: -0.3984
Cell Significance Index: -5.2100 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: -0.4047
Cell Significance Index: -3.4400 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.4057
Cell Significance Index: -9.9000 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: -0.4061
Cell Significance Index: -3.1300 - Cell Name: midget ganglion cell of retina (CL4023188)
Fold Change: -0.4147
Cell Significance Index: -4.3200 - Cell Name: retinal blood vessel endothelial cell (CL0002585)
Fold Change: -0.4265
Cell Significance Index: -5.5100 - Cell Name: stromal cell of endometrium (CL0002255)
Fold Change: -0.4443
Cell Significance Index: -6.3200 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: -0.4475
Cell Significance Index: -5.6700 - Cell Name: epithelial cell of proximal tubule (CL0002306)
Fold Change: -0.4507
Cell Significance Index: -3.4500 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: -0.4536
Cell Significance Index: -6.2200 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: -0.4615
Cell Significance Index: -7.9800 - Cell Name: decidual cell (CL2000002)
Fold Change: -0.4644
Cell Significance Index: -7.4500 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.4691
Cell Significance Index: -7.8900 - Cell Name: ON-bipolar cell (CL0000749)
Fold Change: -0.4691
Cell Significance Index: -5.3000 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: -0.4698
Cell Significance Index: -9.5600 - Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
Fold Change: -0.4780
Cell Significance Index: -5.7700 - Cell Name: peg cell (CL4033014)
Fold Change: -0.4787
Cell Significance Index: -11.0600 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: -0.4788
Cell Significance Index: -5.9700 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: -0.4791
Cell Significance Index: -5.7300 - Cell Name: precursor B cell (CL0000817)
Fold Change: -0.4811
Cell Significance Index: -6.2300 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.4926
Cell Significance Index: -10.5300 - Cell Name: helper T cell (CL0000912)
Fold Change: -0.4940
Cell Significance Index: -7.0200 - Cell Name: hepatocyte (CL0000182)
Fold Change: -0.4961
Cell Significance Index: -6.8800 - Cell Name: squamous epithelial cell (CL0000076)
Fold Change: -0.4962
Cell Significance Index: -6.0400 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.5029
Cell Significance Index: -12.5600 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.5121
Cell Significance Index: -8.5700 - Cell Name: ON midget ganglion cell (CL4033046)
Fold Change: -0.5134
Cell Significance Index: -6.4800 - Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
Fold Change: -0.5222
Cell Significance Index: -5.7000
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3668001480
Symbol: ACHA4_HUMAN
Name: Neuronal acetylcholine receptor subunit alpha-4
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7721089
Title: Cloning and transient expression of genes encoding the human alpha-4 and beta-2 neuronal nicotinic acetylcholine receptor (nAChR) subunits.
PubMed ID: 7721089
PubMed ID: 8833159
Title: Exon-intron structure of the human neuronal nicotinic acetylcholine receptor alpha 4 subunit (CHRNA4).
PubMed ID: 8833159
PubMed ID: 8906617
Title: Comparative structure of human neuronal alpha 2-alpha 7 and beta 2-beta 4 nicotinic acetylcholine receptor subunits and functional expression of the alpha 2, alpha 3, alpha 4, alpha 7, beta 2, and beta 4 subunits.
PubMed ID: 8906617
DOI: 10.1007/bf02736842
PubMed ID: 9009220
Title: Cloning and sequence of full-length cDNAs encoding the human neuronal nicotinic acetylcholine receptor (nAChR) subunits beta3 and beta4 and expression of seven nAChR subunits in the human neuroblastoma cell line SH-SY5Y and/or IMR-32.
PubMed ID: 9009220
PubMed ID: 11780052
Title: The DNA sequence and comparative analysis of human chromosome 20.
PubMed ID: 11780052
DOI: 10.1038/414865a
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 16120769
Title: RIC-3 enhances functional expression of multiple nicotinic acetylcholine receptor subtypes in mammalian cells.
PubMed ID: 16120769
PubMed ID: 27344019
Title: Functional interaction between Lypd6 and nicotinic acetylcholine receptors.
PubMed ID: 27344019
DOI: 10.1111/jnc.13718
PubMed ID: 22361591
Title: NMR structures of the transmembrane domains of the alpha4beta2 nAChR.
PubMed ID: 22361591
PubMed ID: 7550350
Title: A missense mutation in the neuronal nicotinic acetylcholine receptor alpha-4 subunit is associated with autosomal dominant nocturnal frontal lobe epilepsy.
PubMed ID: 7550350
DOI: 10.1038/ng1095-201
PubMed ID: 10563623
Title: A novel mutation of CHRNA4 responsible for autosomal dominant nocturnal frontal lobe epilepsy.
PubMed ID: 10563623
PubMed ID: 14623738
Title: A Korean kindred with autosomal dominant nocturnal frontal lobe epilepsy and mental retardation.
PubMed ID: 14623738
Sequence Information:
- Length: 627
- Mass: 69957
- Checksum: B3A0C0151E5A2AA8
- Sequence:
MELGGPGAPR LLPPLLLLLG TGLLRASSHV ETRAHAEERL LKKLFSGYNK WSRPVANISD VVLVRFGLSI AQLIDVDEKN QMMTTNVWVK QEWHDYKLRW DPADYENVTS IRIPSELIWR PDIVLYNNAD GDFAVTHLTK AHLFHDGRVQ WTPPAIYKSS CSIDVTFFPF DQQNCTMKFG SWTYDKAKID LVNMHSRVDQ LDFWESGEWV IVDAVGTYNT RKYECCAEIY PDITYAFVIR RLPLFYTINL IIPCLLISCL TVLVFYLPSE CGEKITLCIS VLLSLTVFLL LITEIIPSTS LVIPLIGEYL LFTMIFVTLS IVITVFVLNV HHRSPRTHTM PTWVRRVFLD IVPRLLLMKR PSVVKDNCRR LIESMHKMAS APRFWPEPEG EPPATSGTQS LHPPSPSFCV PLDVPAEPGP SCKSPSDQLP PQQPLEAEKA SPHPSPGPCR PPHGTQAPGL AKARSLSVQH MSSPGEAVEG GVRCRSRSIQ YCVPRDDAAP EADGQAAGAL ASRNTHSAEL PPPDQPSPCK CTCKKEPSSV SPSATVKTRS TKAPPPHLPL SPALTRAVEG VQYIADHLKA EDTDFSVKED WKYVAMVIDR IFLWMFIIVC LLGTVGLFLP PWLAGMI
Genular Protein ID: 4102445759
Symbol: Q4VAQ3_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
Sequence Information:
- Length: 451
- Mass: 49872
- Checksum: 43355984FB7B5383
- Sequence:
MKFGSWTYDK AKIDLVNMHS RVDQLDFWES GEWVIVDAVG TYNTRKYECC AEIYPDITYA FVIRRLPLFY TINLIIPCLL ISCLTVLVFY LPSECGEKIT LCISVLLSLT VFLLLITEII PSTSLVIPLI GEYLLFTMIF VTLSIVITVF VLNVHHRSPR THTMPTWVRR VFLDIVPRLL LMKRPSVVKD NCRRLIESMH KMASAPRFWP EPEGEPPATS GTQSLHPPSP SFCVPLDVPA EPGPSCKSPS DQLPPQQPLE AEKASPHPSP GPCRPPHGTQ APGLAKARSL SVQHMSSPGE AVEGGVRCRS RSIQYCVPRD DAAPEADGQA AGALASRNTH SAELPPPDQP SPCKCTCKKE PSSVSPSATV KTRSTKAPPP HLPLSPALTR AVEGVQYIAD HLKAEDTDFS VKEDWKYVAM VIDRIFLWMF IIVCLLGTVG LFLPPWLAGM I
Genular Protein ID: 209298424
Symbol: Q59FV0_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 533
- Mass: 58869
- Checksum: 1939A02DBF569C5A
- Sequence:
APEPGEAPRL DRAHPGCACA ELSLLWLCCC TFTSADGDFA VTHLTKAHLF HDGRVQWTPP AIYKSSCSID VTFFPFDQQN CTMKFGSWTY DKAKIDLVNM HSRVDQLDFW ESGEWVIVDA VGTYNTRKYE CCAEIYPDIT YAFVIRRLPL FYTINLIIPC LLISCLTVLV FYLPSECGEK ITLCISVLLS LTVFLLLITE IIPSTSLVIP LIGEYLLFTM IFVTLSIVIT VFVLNVHHRS PRTHTMPTWV RRVFLDIVPR LLLMKRPSVV KDNCRRLIES MHKMASAPRF WPEPEGEPPA TSGTQSLHPP SPSFCVPLDV PAEPGPSCKS PSDQLPPQQP LEAEKASPHP SPGPCRPPHG TQAPGLAKAR SLSVQHMSSP GEAVEGGVRC RSRSIQYCVP RDDAAPEADG QAAGALASRN THSAELPPPD QPSPCKCTCK KEPSSVSPSA TVKTRSTKAP PPHLPLSPAL TRAVEGVQYI ADHLKAEDTD FSVKEDWKYV AMVIDRIFLW MFIIVCLLGT VGLFLPPWLA GMI
Genular Protein ID: 1212308056
Symbol: B4DK78_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 216
- Mass: 22757
- Checksum: 388663C659882EED
- Sequence:
MHMQEGALFG VPECHGQDPQ HQSTAPAPAP VAGPDPGGGG RPVHCRPPEG RRHRLLGEGG LEVRGHGHRP HLPLDVHHRL PAGDGGPLPA ALAGWHDLGR DREPAWPGAA VHGASIHAAG LGPGWLLPGL CGATRLPNFP SCSVSAVRRP WTGTRPLGRP SVELLPVGLW PQEAVAWSRG GGRRLLPAGL GLSPVQESPE LPCRWNSLLP VSQQIW
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.