Details for: CLCN3
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 343.7585
Cell Significance Index: -53.4700 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 234.8967
Cell Significance Index: -59.5800 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 129.6273
Cell Significance Index: -61.2000 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 122.6071
Cell Significance Index: -49.8100 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 111.8811
Cell Significance Index: -57.5500 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 52.3492
Cell Significance Index: -49.9800 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 46.1655
Cell Significance Index: -56.9200 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 21.7649
Cell Significance Index: -58.3100 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 17.3664
Cell Significance Index: -53.3400 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 15.3850
Cell Significance Index: -60.7100 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 10.2897
Cell Significance Index: -22.5200 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 2.2756
Cell Significance Index: 118.2100 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 2.1557
Cell Significance Index: 135.8700 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 2.1264
Cell Significance Index: 163.1800 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 2.1098
Cell Significance Index: 25.1500 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.0141
Cell Significance Index: 404.0200 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 1.8068
Cell Significance Index: 108.4700 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 1.6395
Cell Significance Index: 92.0000 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.5885
Cell Significance Index: 569.7700 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 1.5163
Cell Significance Index: 273.3500 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 1.4529
Cell Significance Index: 67.7400 - Cell Name: umbrella cell of urothelium (CL4030056)
Fold Change: 1.4432
Cell Significance Index: 13.2900 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 1.4323
Cell Significance Index: 64.9200 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 1.2321
Cell Significance Index: 75.7300 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.9907
Cell Significance Index: 121.8200 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.8526
Cell Significance Index: 10.5800 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.8248
Cell Significance Index: 23.7700 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.7993
Cell Significance Index: 19.1700 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.7054
Cell Significance Index: 139.9800 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.7015
Cell Significance Index: 485.1500 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.6746
Cell Significance Index: 35.1400 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.6661
Cell Significance Index: 44.7900 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.5554
Cell Significance Index: 14.8300 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.5332
Cell Significance Index: 291.1700 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.4829
Cell Significance Index: 33.4000 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.4513
Cell Significance Index: 44.6400 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.3682
Cell Significance Index: 16.2900 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.3410
Cell Significance Index: 46.8400 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.3256
Cell Significance Index: 12.3300 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.3186
Cell Significance Index: 11.2000 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.3135
Cell Significance Index: 50.9900 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.3092
Cell Significance Index: 136.7200 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.2971
Cell Significance Index: 32.3200 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.2804
Cell Significance Index: 527.9600 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.2802
Cell Significance Index: 7.8300 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.2352
Cell Significance Index: 4.0300 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.2179
Cell Significance Index: 5.8400 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 0.2097
Cell Significance Index: 35.8100 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.2045
Cell Significance Index: 38.9200 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.1528
Cell Significance Index: 97.0400 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0917
Cell Significance Index: 169.1700 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0789
Cell Significance Index: 121.5100 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 0.0692
Cell Significance Index: 1.9700 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: 0.0571
Cell Significance Index: 2.6800 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.0385
Cell Significance Index: 0.9900 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0166
Cell Significance Index: 22.5100 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: 0.0109
Cell Significance Index: 8.0000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0060
Cell Significance Index: -2.7100 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0298
Cell Significance Index: -3.5200 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0301
Cell Significance Index: -22.3200 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0360
Cell Significance Index: -22.4900 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0395
Cell Significance Index: -5.7400 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.0545
Cell Significance Index: -1.1600 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0580
Cell Significance Index: -43.9100 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0659
Cell Significance Index: -8.4500 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0697
Cell Significance Index: -39.3100 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1297
Cell Significance Index: -27.3300 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.1652
Cell Significance Index: -19.2500 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1684
Cell Significance Index: -21.7600 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.1852
Cell Significance Index: -53.2800 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1933
Cell Significance Index: -10.1500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.1955
Cell Significance Index: -5.3200 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: -0.1972
Cell Significance Index: -1.5200 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1975
Cell Significance Index: -20.1700 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.2343
Cell Significance Index: -16.5700 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.2777
Cell Significance Index: -4.1000 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.3005
Cell Significance Index: -6.5800 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.3312
Cell Significance Index: -21.3700 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.3392
Cell Significance Index: -38.8700 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.4224
Cell Significance Index: -48.2200 - Cell Name: peg cell (CL4033014)
Fold Change: -0.4590
Cell Significance Index: -10.6100 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.4845
Cell Significance Index: -6.6100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.4882
Cell Significance Index: -36.3900 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.4886
Cell Significance Index: -50.8800 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.6411
Cell Significance Index: -13.8900 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.6519
Cell Significance Index: -51.6300 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.7177
Cell Significance Index: -17.9400 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.7938
Cell Significance Index: -13.2900 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.8424
Cell Significance Index: -17.8800 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.8975
Cell Significance Index: -23.6000 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.9483
Cell Significance Index: -18.7500 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.9729
Cell Significance Index: -59.6500 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: -1.0075
Cell Significance Index: -10.4300 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -1.0181
Cell Significance Index: -35.3800 - Cell Name: preadipocyte (CL0002334)
Fold Change: -1.0232
Cell Significance Index: -19.9700 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -1.0302
Cell Significance Index: -32.8100 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -1.0679
Cell Significance Index: -21.4400 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -1.0776
Cell Significance Index: -35.2800 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -1.1309
Cell Significance Index: -36.2200 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -1.1511
Cell Significance Index: -24.6100
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1603048291
Symbol: CLCN3_HUMAN
Name: H(+)/Cl(-) exchange transporter 3
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7665160
Title: Characterization of a human and murine gene (CLCN3) sharing similarities to voltage-gated chloride channels and to a yeast integral membrane protein.
PubMed ID: 7665160
PubMed ID: 9678416
Title: Ion transporters and receptors in cDNA libraries from lens and cornea epithelia.
PubMed ID: 9678416
PubMed ID: 11274166
Title: Regulation of human CLC-3 channels by multifunctional Ca2+/calmodulin-dependent protein kinase.
PubMed ID: 11274166
PubMed ID: 11967229
Title: ClC-3B, a novel ClC-3 splicing variant that interacts with EBP50 and facilitates expression of CFTR-regulated ORCC.
PubMed ID: 11967229
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15815621
Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
PubMed ID: 15815621
DOI: 10.1038/nature03466
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10198195
Title: Expression of CLCN voltage-gated chloride channel genes in human blood vessels.
PubMed ID: 10198195
PubMed ID: 12471024
Title: The PDZ-binding chloride channel ClC-3B localizes to the Golgi and associates with cystic fibrosis transmembrane conductance regulator-interacting PDZ proteins.
PubMed ID: 12471024
PubMed ID: 29845874
Title: CLC Chloride Channels and Transporters: Structure, Function, Physiology, and Disease.
PubMed ID: 29845874
PubMed ID: 34186028
Title: Unique variants in CLCN3, encoding an endosomal anion/proton exchanger, underlie a spectrum of neurodevelopmental disorders.
PubMed ID: 34186028
Sequence Information:
- Length: 818
- Mass: 90966
- Checksum: 30FF0A6A2D6EF3B8
- Sequence:
MESEQLFHRG YYRNSYNSIT SASSDEELLD GAGVIMDFQT SEDDNLLDGD TAVGTHYTMT NGGSINSSTH LLDLLDEPIP GVGTYDDFHT IDWVREKCKD RERHRRINSK KKESAWEMTK SLYDAWSGWL VVTLTGLASG ALAGLIDIAA DWMTDLKEGI CLSALWYNHE QCCWGSNETT FEERDKCPQW KTWAELIIGQ AEGPGSYIMN YIMYIFWALS FAFLAVSLVK VFAPYACGSG IPEIKTILSG FIIRGYLGKW TLMIKTITLV LAVASGLSLG KEGPLVHVAC CCGNIFSYLF PKYSTNEAKK REVLSAASAA GVSVAFGAPI GGVLFSLEEV SYYFPLKTLW RSFFAALVAA FVLRSINPFG NSRLVLFYVE YHTPWYLFEL FPFILLGVFG GLWGAFFIRA NIAWCRRRKS TKFGKYPVLE VIIVAAITAV IAFPNPYTRL NTSELIKELF TDCGPLESSS LCDYRNDMNA SKIVDDIPDR PAGIGVYSAI WQLCLALIFK IIMTVFTFGI KVPSGLFIPS MAIGAIAGRI VGIAVEQLAY YHHDWFIFKE WCEVGADCIT PGLYAMVGAA ACLGGVTRMT VSLVVIVFEL TGGLEYIVPL MAAVMTSKWV GDAFGREGIY EAHIRLNGYP FLDAKEEFTH TTLAADVMRP RRNDPPLAVL TQDNMTVDDI ENMINETSYN GFPVIMSKES QRLVGFALRR DLTIAIESAR KKQEGIVGSS RVCFAQHTPS LPAESPRPLK LRSILDMSPF TVTDHTPMEI VVDIFRKLGL RQCLVTHNGR LLGIITKKDI LRHMAQTANQ DPASIMFN
Genular Protein ID: 2768621752
Symbol: B3KXK0_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 725
- Mass: 80529
- Checksum: 3BB035171445CF06
- Sequence:
MDASSDPYLP YDGGGDNIPL RELHKRGTHY TMTNGGSINS STHLLDLLDE PIPGVGTYDD FHTIDWVREK CKDRERHRRI NSKKKESAWE MTKSLYDAWS GWLVVTLTGL ASGALAGLID IAADWMTDLK EGICLSALWY NHEQCCWGSN ETTFEERDKC PQWKTWAELI IGQAEGPGSY IMNYIMYIFW ALSFAFLAVS LVKVFAPYAC GSGIPEIKTI LSGFIIRGYL GKWTLMIKTI TLVLAVASGL SLGKEGPLVH VACCCGNIFS YLFPKYSTNE AKKREVLSAA SAAGVSVAFG APIGGVLFSL EEVSYYFPLK TLWRSFFAAL VAAFVLRSIN PFGNSRLVLF YVEYHTPWYL FELFPFILLG VFGGLWGAFF IRANIAWCRR RKSTKFGKYP VLEVIIVAAI TAVIAFPNPY TRLNTSELIK ELFTDCGPLE SSSLCDYRND MNASKIVDDI PDRPAGIGVY SAIWQLCLAL IFKIIMTVFT FGIKVPSGLF IPSMAIGAIA GRIVGIAVEQ LAYYHHDWFI FKEWCEVGAD CITPGLYAMV GAAACLGGVT RMTVSLVVIV FELTGGLEYI VPLMAAVMTS KWVGDAFGRE GIYEAHIRLN GYPFLDAKEE FTHTTLAADV MRPRRNDPPL AVLTQDNMTV DDIENMINET SYNGFPVIMS KESQRLVGFA LRRDLTIAIE SARKKQEGIV GSSRVCFAQH TPSLPAESPR PLKLR
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.