Genular: Defining Cellular Identity and Function

Details for: Opn1sw

Gene ID: 12057

Symbol: Opn1sw

Ensembl ID: ENSMUSG00000058831

Description: opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)

Associated with

Class a/1 (rhodopsin-like receptors)
(R-MMU-373076)
G alpha (i) signalling events
(R-MMU-418594)
Gpcr downstream signalling
(R-MMU-388396)
Gpcr ligand binding
(R-MMU-500792)
Opsins
(R-MMU-419771)
Sensory perception
(R-MMU-9709957)
Signaling by gpcr
(R-MMU-372790)
The retinoid cycle in cones (daylight vision)
(R-MMU-2187335)
Visual phototransduction
(R-MMU-2187338)
Cell body
(GO:0044297)
Cell projection
(GO:0042995)
Cellular response to light stimulus
(GO:0071482)
Cellular response to uv-a
(GO:0071492)
Cone photoreceptor outer segment
(GO:0120199)
Cytoplasm
(GO:0005737)
Cytosol
(GO:0005829)
G protein-coupled photoreceptor activity
(GO:0008020)
G protein-coupled receptor activity
(GO:0004930)
G protein-coupled receptor signaling pathway
(GO:0007186)
Intercellular bridge
(GO:0045171)
Membrane
(GO:0016020)
Nucleoplasm
(GO:0005654)
Perinuclear region of cytoplasm
(GO:0048471)
Photoreceptor activity
(GO:0009881)
Photoreceptor outer segment
(GO:0001750)
Phototransduction
(GO:0007602)
Plasma membrane
(GO:0005886)
Response to stimulus
(GO:0050896)
Signal transduction
(GO:0007165)
Terminal bouton
(GO:0043195)
Visual perception
(GO:0007601)

Other Information

Proteins

Short-wave-sensitive opsin 1

Genular Protein ID: 2060187122

Symbol: OPSB_MOUSE

Name: Short-wave-sensitive opsin 1

UniProtKB Accession Codes:

P51491 Q548Z8

Database IDs:

Citations:

PubMed ID: 8088841

Title: Murine and bovine blue cone pigment genes: cloning and characterization of two new members of the S family of visual pigments.

PubMed ID: 8088841

DOI: 10.1006/geno.1994.1292

PubMed ID: 11055434

Title: The murine cone photoreceptor: a single cone type expresses both S and M opsins with retinal spatial patterning.

PubMed ID: 11055434

DOI: 10.1016/s0896-6273(00)00062-3

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 21219924

Title: A mouse M-opsin monochromat: retinal cone photoreceptors have increased M-opsin expression when S-opsin is knocked out.

PubMed ID: 21219924

DOI: 10.1016/j.visres.2010.12.017

PubMed ID: 25416279

Title: Genetic deletion of S-opsin prevents rapid cone degeneration in a mouse model of Leber congenital amaurosis.

PubMed ID: 25416279

DOI: 10.1093/hmg/ddu588

Sequence Information:

Length: 346
Mass: 38922
Checksum: 8BEEAB0198EE6863
Sequence:

MSGEDDFYLF QNISSVGPWD GPQYHLAPVW AFRLQAAFMG FVFFVGTPLN AIVLVATLHY 
KKLRQPLNYI LVNVSLGGFL FCIFSVFTVF IASCHGYFLF GRHVCALEAF LGSVAGLVTG 
WSLAFLAFER YVVICKPFGS IRFNSKHALM VVLATWIIGI GVSIPPFFGW SRFIPEGLQC 
SCGPDWYTVG TKYRSEYYTW FLFIFCFIIP LSLICFSYSQ LLRTLRAVAA QQQESATTQK 
AEREVSHMVV VMVGSFCLCY VPYAALAMYM VNNRNHGLDL RLVTIPAFFS KSSCVYNPII 
YCFMNKQFRA CILEMVCRKP MADESDVSGS QKTEVSTVSS SKVGPH

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Opn1sw

Associated with

Other Information

Murine and bovine blue cone pigment genes: cloning and characterization of two new members of the S family of visual pigments. PubMed ID: 8088841

The murine cone photoreceptor: a single cone type expresses both S and M opsins with retinal spatial patterning. PubMed ID: 11055434

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334