Genular: Defining Cellular Identity and Function

Details for: Runx3

Gene ID: 12399

Symbol: Runx3

Ensembl ID: ENSMUSG00000070691

Description: runt related transcription factor 3

Associated with

Gene expression (transcription)
(R-MMU-74160)
Generic transcription pathway
(R-MMU-212436)
Regulation of runx3 expression and activity
(R-MMU-8941858)
Rna polymerase ii transcription
(R-MMU-73857)
Runx3 regulates cdkn1a transcription
(R-MMU-8941855)
Runx3 regulates notch signaling
(R-MMU-8941856)
Runx3 regulates p14-arf
(R-MMU-8951936)
Runx3 regulates wnt signaling
(R-MMU-8951430)
Runx3 regulates yap1-mediated transcription
(R-MMU-8951671)
Transcriptional regulation by runx3
(R-MMU-8878159)
Atp binding
(GO:0005524)
Axon guidance
(GO:0007411)
Cell maturation
(GO:0048469)
Chondrocyte differentiation
(GO:0002062)
Chromatin
(GO:0000785)
Core-binding factor complex
(GO:0016513)
Cytoplasm
(GO:0005737)
Cytosol
(GO:0005829)
Dna-binding transcription factor activity
(GO:0003700)
Dna-binding transcription factor activity, rna polymerase ii-specific
(GO:0000981)
Dna binding
(GO:0003677)
Hair follicle morphogenesis
(GO:0031069)
Hemopoiesis
(GO:0030097)
Histone deacetylase binding
(GO:0042826)
Intracellular membrane-bounded organelle
(GO:0043231)
Negative regulation of cd4-positive, alpha-beta t cell differentiation
(GO:0043371)
Negative regulation of cell cycle
(GO:0045786)
Negative regulation of epithelial cell proliferation
(GO:0050680)
Negative regulation of transcription by rna polymerase ii
(GO:0000122)
Neuron differentiation
(GO:0030182)
Neuron projection development
(GO:0031175)
Nucleolus
(GO:0005730)
Nucleoplasm
(GO:0005654)
Nucleus
(GO:0005634)
Ossification
(GO:0001503)
Positive regulation of cd8-positive, alpha-beta t cell differentiation
(GO:0043378)
Positive regulation of dna-templated transcription
(GO:0045893)
Positive regulation of extrinsic apoptotic signaling pathway
(GO:2001238)
Protein binding
(GO:0005515)
Protein phosphorylation
(GO:0006468)
Regulation of cell differentiation
(GO:0045595)
Regulation of dna-templated transcription
(GO:0006355)
Regulation of transcription by rna polymerase ii
(GO:0006357)
Response to transforming growth factor beta
(GO:0071559)
Rna polymerase ii cis-regulatory region sequence-specific dna binding
(GO:0000978)
Rna polymerase ii transcription regulatory region sequence-specific dna binding
(GO:0000977)
Sequence-specific double-stranded dna binding
(GO:1990837)
Transcription corepressor binding
(GO:0001222)
Type ii interferon production
(GO:0032609)

Other Information

Proteins

Q3U1Q3_MOUSE

Genular Protein ID: 1651154259

Symbol: Q3U1Q3_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q3U1Q3

Database IDs:

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

Sequence Information:

Length: 423
Mass: 45111
Checksum: 429FF3B198D76305
Sequence:

MASNSIFDSF PNYTPTFIRD PSTSRRFTPP STAFPCGGGG GGKMGENSGA LSAQATAGPG 
GRTRPEVRSM VDVLADHAGE LVRTDSPNFL CSVLPSHWRC NKTLPVAFKV VALGDVPDGT 
VVTVMAGNDE NYSAELRNAS AVMKNQVARF NDLRFVGRSG RGKSFTLTIT VFTNPTQVAT 
YHRAIKVTVD GPREPRRHRQ KIEDQTKAFP DRFGDLRMRV TPSTPSPRGS LSTTSHFSSQ 
AQTPIQGSSD LNPFSDPRQF DRSFPTLQSL TESRFPDPRM HYPGAMSAAF PYSATPSGTS 
LGSLSVAGMP ASSRFHHTYL PPPYPGAPQS QSGPFQANPA PYHLFYGASS GSYQFSMAAA 
GGGERSPTRM LTSCPSGASV SAGNLMNPSL GQADGVEADG SHSNSPTALS TPGRMDEAVW 
RPY

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Runx3

Associated with

Other Information

High-efficiency full-length cDNA cloning. PubMed ID: 10349636

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. PubMed ID: 11042159

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. PubMed ID: 11076861

Functional annotation of a full-length mouse cDNA collection. PubMed ID: 11217851

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. PubMed ID: 12466851

Antisense Transcription in the Mammalian Transcriptome. PubMed ID: 16141073

Lineage-specific biology revealed by a finished genome assembly of the mouse. PubMed ID: 19468303