Details for: CNGB1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 12.2090
Cell Significance Index: -4.9600 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 11.5770
Cell Significance Index: 729.6600 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 5.1951
Cell Significance Index: -4.9600 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 2.7655
Cell Significance Index: 185.9500 - Cell Name: photoreceptor cell (CL0000210)
Fold Change: 2.7366
Cell Significance Index: 38.4400 - Cell Name: retinal cone cell (CL0000573)
Fold Change: 0.6456
Cell Significance Index: 8.0600 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 0.2695
Cell Significance Index: 7.6900 - Cell Name: retinal bipolar neuron (CL0000748)
Fold Change: 0.2192
Cell Significance Index: 2.6600 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.2048
Cell Significance Index: 3.5100 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 0.1200
Cell Significance Index: 1.4300 - Cell Name: lens fiber cell (CL0011004)
Fold Change: 0.0911
Cell Significance Index: 2.8800 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.0877
Cell Significance Index: 4.5700 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: 0.0824
Cell Significance Index: 0.6800 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: 0.0547
Cell Significance Index: 0.5200 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0489
Cell Significance Index: 9.8100 - Cell Name: Mueller cell (CL0000636)
Fold Change: 0.0377
Cell Significance Index: 0.2900 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.0309
Cell Significance Index: 1.6200 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0104
Cell Significance Index: 3.7400 - Cell Name: OFF-bipolar cell (CL0000750)
Fold Change: 0.0079
Cell Significance Index: 0.0700 - Cell Name: pyramidal neuron (CL0000598)
Fold Change: 0.0052
Cell Significance Index: 0.0400 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.0037
Cell Significance Index: 0.0500 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0004
Cell Significance Index: 0.0900 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0007
Cell Significance Index: -1.3300 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0021
Cell Significance Index: -3.8900 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: -0.0021
Cell Significance Index: -0.9200 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0026
Cell Significance Index: -3.9600 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0039
Cell Significance Index: -5.3300 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0048
Cell Significance Index: -3.0200 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0053
Cell Significance Index: -2.9000 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0064
Cell Significance Index: -4.7600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0070
Cell Significance Index: -1.2700 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0070
Cell Significance Index: -5.3300 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0084
Cell Significance Index: -1.4400 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0089
Cell Significance Index: -0.2500 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0091
Cell Significance Index: -1.3200 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0092
Cell Significance Index: -5.2100 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0092
Cell Significance Index: -5.7700 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0101
Cell Significance Index: -4.6000 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0145
Cell Significance Index: -4.1600 - Cell Name: enteric neuron (CL0007011)
Fold Change: -0.0155
Cell Significance Index: -0.1100 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.0171
Cell Significance Index: -0.7500 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.0182
Cell Significance Index: -0.2600 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0241
Cell Significance Index: -2.7600 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.0251
Cell Significance Index: -0.6700 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0260
Cell Significance Index: -3.2000 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0272
Cell Significance Index: -5.7300 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.0310
Cell Significance Index: -1.6100 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0343
Cell Significance Index: -3.5000 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0383
Cell Significance Index: -5.2600 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0396
Cell Significance Index: -5.1200 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0427
Cell Significance Index: -2.6300 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0433
Cell Significance Index: -3.0600 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0521
Cell Significance Index: -5.4200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0535
Cell Significance Index: -4.1100 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.0592
Cell Significance Index: -3.3200 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.0676
Cell Significance Index: -3.1500 - Cell Name: helper T cell (CL0000912)
Fold Change: -0.0714
Cell Significance Index: -1.0200 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0719
Cell Significance Index: -5.3600 - Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
Fold Change: -0.0825
Cell Significance Index: -1.1000 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0915
Cell Significance Index: -2.4900 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0928
Cell Significance Index: -3.2500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0944
Cell Significance Index: -4.4400 - Cell Name: ON-bipolar cell (CL0000749)
Fold Change: -0.0974
Cell Significance Index: -1.1000 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.0989
Cell Significance Index: -2.4000 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.1093
Cell Significance Index: -3.4800 - Cell Name: neuron (CL0000540)
Fold Change: -0.1097
Cell Significance Index: -1.0400 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.1127
Cell Significance Index: -3.6900 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.1142
Cell Significance Index: -2.9400 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.1152
Cell Significance Index: -5.2200 - Cell Name: skeletal muscle fibroblast (CL0011027)
Fold Change: -0.1177
Cell Significance Index: -0.8000 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.1210
Cell Significance Index: -5.3500 - Cell Name: preadipocyte (CL0002334)
Fold Change: -0.1266
Cell Significance Index: -2.4700 - Cell Name: neural cell (CL0002319)
Fold Change: -0.1277
Cell Significance Index: -1.4900 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.1347
Cell Significance Index: -3.3600 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.1350
Cell Significance Index: -3.9800 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.1392
Cell Significance Index: -3.7300 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.1413
Cell Significance Index: -4.9100 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.1413
Cell Significance Index: -5.3500 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.1562
Cell Significance Index: -3.2700 - Cell Name: glutamatergic neuron (CL0000679)
Fold Change: -0.1643
Cell Significance Index: -1.7900 - Cell Name: duct epithelial cell (CL0000068)
Fold Change: -0.1700
Cell Significance Index: -2.3500 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.1742
Cell Significance Index: -3.2200 - Cell Name: Purkinje cell (CL0000121)
Fold Change: -0.1772
Cell Significance Index: -3.8800 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.1782
Cell Significance Index: -3.8500 - Cell Name: L4 intratelencephalic projecting glutamatergic neuron (CL4030063)
Fold Change: -0.1793
Cell Significance Index: -1.9700 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.1807
Cell Significance Index: -6.3500 - Cell Name: skeletal muscle satellite cell (CL0000594)
Fold Change: -0.1829
Cell Significance Index: -1.9300 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: -0.1833
Cell Significance Index: -3.7300 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.1870
Cell Significance Index: -4.6700 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.1872
Cell Significance Index: -5.3700 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.1914
Cell Significance Index: -4.5900 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.1917
Cell Significance Index: -4.0000 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.1917
Cell Significance Index: -5.0400 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.1936
Cell Significance Index: -4.1100 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.1947
Cell Significance Index: -4.9600 - Cell Name: myeloid dendritic cell (CL0000782)
Fold Change: -0.1951
Cell Significance Index: -1.5300 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: -0.1963
Cell Significance Index: -2.2300 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: -0.1977
Cell Significance Index: -4.9300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.1978
Cell Significance Index: -5.7000 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.1998
Cell Significance Index: -3.9500
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1215173794
Symbol: CNGB1_HUMAN
Name: Cyclic nucleotide-gated channel beta-1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7682292
Title: A new subunit of the cyclic nucleotide-gated cation channel in retinal rods.
PubMed ID: 7682292
DOI: 10.1038/362764a0
PubMed ID: 7590744
Title: cDNA, gene structure, and chromosomal localization of human GAR1 (CNCG3L), a homolog of the third subunit of bovine photoreceptor cGMP-gated channel.
PubMed ID: 7590744
PubMed ID: 8766832
Title: The beta subunit of human rod photoreceptor cGMP-gated cation channel is generated from a complex transcription unit.
PubMed ID: 8766832
PubMed ID: 9535905
Title: Identification of a domain on the beta-subunit of the rod cGMP-gated cation channel that mediates inhibition by calcium-calmodulin.
PubMed ID: 9535905
PubMed ID: 15616553
Title: The sequence and analysis of duplication-rich human chromosome 16.
PubMed ID: 15616553
DOI: 10.1038/nature03187
PubMed ID: 10717482
Title: Genomic organization of the human rod photoreceptor cGMP-gated cation channel beta-subunit gene.
PubMed ID: 10717482
PubMed ID: 11764791
Title: Nomenclature for ion channel subunits.
PubMed ID: 11764791
PubMed ID: 15195096
Title: Calmodulin permanently associates with rat olfactory CNG channels under native conditions.
PubMed ID: 15195096
DOI: 10.1038/nn1266
PubMed ID: 16407240
Title: The glutamic acid-rich protein-2 (GARP2) is a high affinity rod photoreceptor phosphodiesterase (PDE6)-binding protein that modulates its catalytic properties.
PubMed ID: 16407240
PubMed ID: 16280326
Title: Glutamic acid-rich proteins of rod photoreceptors are natively unfolded.
PubMed ID: 16280326
PubMed ID: 34699778
Title: Structural mechanisms of assembly, permeation, gating, and pharmacology of native human rod CNG channel.
PubMed ID: 34699778
PubMed ID: 11379879
Title: Segregation of a mutation in CNGB1 encoding the beta-subunit of the rod cGMP-gated channel in a family with autosomal recessive retinitis pigmentosa.
PubMed ID: 11379879
PubMed ID: 24339724
Title: Homozygosity mapping in autosomal recessive retinitis pigmentosa families detects novel mutations.
PubMed ID: 24339724
PubMed ID: 28056120
Title: Clinical Characterization of CNGB1-Related Autosomal Recessive Retinitis Pigmentosa.
PubMed ID: 28056120
PubMed ID: 29800053
Title: Olfactory Dysfunction in Patients With CNGB1-Associated Retinitis Pigmentosa.
PubMed ID: 29800053
Sequence Information:
- Length: 1251
- Mass: 139678
- Checksum: 7A45CB399EB2B20C
- Sequence:
MLGWVQRVLP QPPGTPRKTK MQEEEEVEPE PEMEAEVEPE PNPEEAETES ESMPPEESFK EEEVAVADPS PQETKEAALT STISLRAQGA EISEMNSPSR RVLTWLMKGV EKVIPQPVHS ITEDPAQILG HGSTGDTGCT DEPNEALEAQ DTRPGLRLLL WLEQNLERVL PQPPKSSEVW RDEPAVATGA ASDPAPPGRP QEMGPKLQAR ETPSLPTPIP LQPKEEPKEA PAPEPQPGSQ AQTSSLPPTR DPARLVAWVL HRLEMALPQP VLHGKIGEQE PDSPGICDVQ TISILPGGQV EPDLVLEEVE PPWEDAHQDV STSPQGTEVV PAYEEENKAV EKMPRELSRI EEEKEDEEEE EEEEEEEEEE EVTEVLLDSC VVSQVGVGQS EEDGTRPQST SDQKLWEEVG EEAKKEAEEK AKEEAEEVAE EEAEKEPQDW AETKEEPEAE AEAASSGVPA TKQHPEVQVE DTDADSCPLM AEENPPSTVL PPPSPAKSDT LIVPSSASGT HRKKLPSEDD EAEELKALSP AESPVVAWSD PTTPKDTDGQ DRAASTASTN SAIINDRLQE LVKLFKERTE KVKEKLIDPD VTSDEESPKP SPAKKAPEPA PDTKPAEAEP VEEEHYCDML CCKFKHRPWK KYQFPQSIDP LTNLMYVLWL FFVVMAWNWN CWLIPVRWAF PYQTPDNIHH WLLMDYLCDL IYFLDITVFQ TRLQFVRGGD IITDKKDMRN NYLKSRRFKM DLLSLLPLDF LYLKVGVNPL LRLPRCLKYM AFFEFNSRLE SILSKAYVYR VIRTTAYLLY SLHLNSCLYY WASAYQGLGS THWVYDGVGN SYIRCYYFAV KTLITIGGLP DPKTLFEIVF QLLNYFTGVF AFSVMIGQMR DVVGAATAGQ TYYRSCMDST VKYMNFYKIP KSVQNRVKTW YEYTWHSQGM LDESELMVQL PDKMRLDLAI DVNYNIVSKV ALFQGCDRQM IFDMLKRLRS VVYLPNDYVC KKGEIGREMY IIQAGQVQVL GGPDGKSVLV TLKAGSVFGE ISLLAVGGGN RRTANVVAHG FTNLFILDKK DLNEILVHYP ESQKLLRKKA RRMLRSNNKP KEEKSVLILP PRAGTPKLFN AALAMTGKMG GKGAKGGKLA HLRARLKELA ALEAAAKQQE LVEQAKSSQD VKGEEGSAAP DQHTHPKEAA TDPPAPRTPP EPPGSPPSSP PPASLGRPEG EEEGPAEPEE HSVRICMSPG PEPGEQILSV KMPEEREEKA E
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.