Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: neuron associated cell (sensu Vertebrata) (CL0000123)
Fold Change: 9.23
Marker Score: 48,427 - Cell Name: chromaffin cell (CL0000166)
Fold Change: 8.91
Marker Score: 12,536 - Cell Name: granule cell (CL0000120)
Fold Change: 8.52
Marker Score: 64,244 - Cell Name: stellate neuron (CL0000122)
Fold Change: 8.31
Marker Score: 44,647 - Cell Name: macroglial cell (CL0000126)
Fold Change: 7.25
Marker Score: 16,673 - Cell Name: sympathetic neuron (CL0011103)
Fold Change: 6.43
Marker Score: 2,124 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 5.31
Marker Score: 179,250 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: 4.11
Marker Score: 19,022 - Cell Name: mature astrocyte (CL0002627)
Fold Change: 4.05
Marker Score: 2,668 - Cell Name: neuronal brush cell (CL0000555)
Fold Change: 3.75
Marker Score: 12,559 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: 3.41
Marker Score: 2,731 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 3.37
Marker Score: 7,388 - Cell Name: photoreceptor cell (CL0000210)
Fold Change: 3.24
Marker Score: 2,439 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 3.18
Marker Score: 67,963 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 3.05
Marker Score: 12,762 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: 2.9
Marker Score: 8,264 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: 2.88
Marker Score: 57,346 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 2.81
Marker Score: 42,067 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 2.79
Marker Score: 21,381 - Cell Name: pyramidal neuron (CL0000598)
Fold Change: 2.73
Marker Score: 4,589 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 2.71
Marker Score: 103,082 - Cell Name: brainstem motor neuron (CL2000047)
Fold Change: 2.71
Marker Score: 1,575 - Cell Name: astrocyte (CL0000127)
Fold Change: 2.69
Marker Score: 2,331 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: 2.65
Marker Score: 3,305 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 2.6
Marker Score: 10,783 - Cell Name: OFF retinal ganglion cell (CL4023033)
Fold Change: 2.47
Marker Score: 1,035 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 2.44
Marker Score: 89,868 - Cell Name: oligodendrocyte precursor cell (CL0002453)
Fold Change: 2.35
Marker Score: 2,912 - Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 2.34
Marker Score: 9,062 - Cell Name: endocrine cell (CL0000163)
Fold Change: 2.29
Marker Score: 1,186 - Cell Name: kidney interstitial fibroblast (CL1000692)
Fold Change: 2.24
Marker Score: 4,305 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 2.19
Marker Score: 20,629 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 2.12
Marker Score: 816 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.08
Marker Score: 127,882 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: 2.07
Marker Score: 1,208 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 2.07
Marker Score: 21,384 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 2.03
Marker Score: 3,855 - Cell Name: neuron (CL0000540)
Fold Change: 2.02
Marker Score: 8,207 - Cell Name: CNS interneuron (CL0000402)
Fold Change: 1.94
Marker Score: 931 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 1.93
Marker Score: 18,328 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 1.88
Marker Score: 16,144 - Cell Name: ON retinal ganglion cell (CL4023032)
Fold Change: 1.88
Marker Score: 513 - Cell Name: cerebellar granule cell precursor (CL0002362)
Fold Change: 1.83
Marker Score: 1,027 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 1.8
Marker Score: 2,067 - Cell Name: type A enteroendocrine cell (CL0002067)
Fold Change: 1.72
Marker Score: 695 - Cell Name: ganglion interneuron (CL0000397)
Fold Change: 1.72
Marker Score: 522 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: 1.72
Marker Score: 542 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: 1.68
Marker Score: 7,008 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 1.65
Marker Score: 2,552 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 1.37
Marker Score: 2,783 - Cell Name: primary sensory neuron (sensu Teleostei) (CL0000531)
Fold Change: 1.37
Marker Score: 459 - Cell Name: granulocyte monocyte progenitor cell (CL0000557)
Fold Change: 1.37
Marker Score: 866 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 1.3
Marker Score: 782 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 1.28
Marker Score: 374 - Cell Name: skin fibroblast (CL0002620)
Fold Change: 1.16
Marker Score: 301 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 1.11
Marker Score: 664 - Cell Name: Bergmann glial cell (CL0000644)
Fold Change: 1.06
Marker Score: 433 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 1.04
Marker Score: 355 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: 1.04
Marker Score: 251,758 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 1.04
Marker Score: 792 - Cell Name: A2 amacrine cell (CL0004219)
Fold Change: 1.02
Marker Score: 324 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 1.02
Marker Score: 1,124 - Cell Name: PP cell (CL0000696)
Fold Change: 1
Marker Score: 226 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71,783 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 48,009 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30,406 - Cell Name: podocyte (CL0000653)
Fold Change: 0.96
Marker Score: 355 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2,414 - Cell Name: smooth muscle cell of prostate (CL1000487)
Fold Change: 0.95
Marker Score: 241 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.93
Marker Score: 14,562 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.93
Marker Score: 5,306 - Cell Name: mesangial cell (CL0000650)
Fold Change: 0.92
Marker Score: 1,107 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.92
Marker Score: 2,741 - Cell Name: mature microglial cell (CL0002629)
Fold Change: 0.88
Marker Score: 317 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.88
Marker Score: 513 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5,284 - Cell Name: rod bipolar cell (CL0000751)
Fold Change: 0.87
Marker Score: 452 - Cell Name: microglial cell (CL0000129)
Fold Change: 0.84
Marker Score: 1,521 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: 0.83
Marker Score: 808 - Cell Name: Mueller cell (CL0000636)
Fold Change: 0.82
Marker Score: 1,134 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 0.78
Marker Score: 715 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.77
Marker Score: 1,258 - Cell Name: brush cell (CL0002204)
Fold Change: 0.77
Marker Score: 705 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.76
Marker Score: 395 - Cell Name: ovarian surface epithelial cell (CL2000064)
Fold Change: 0.76
Marker Score: 2,071 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.75
Marker Score: 498 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.75
Marker Score: 1,772 - Cell Name: glutamatergic neuron (CL0000679)
Fold Change: 0.75
Marker Score: 7,587 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 0.74
Marker Score: 925 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: 0.74
Marker Score: 320 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: 0.72
Marker Score: 1,721 - Cell Name: neural cell (CL0002319)
Fold Change: 0.72
Marker Score: 347 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.7
Marker Score: 180 - Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
Fold Change: 0.7
Marker Score: 1,875 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.7
Marker Score: 332 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.69
Marker Score: 223 - Cell Name: visceromotor neuron (CL0005025)
Fold Change: 0.68
Marker Score: 197 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.66
Marker Score: 1,339 - Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
Fold Change: 0.66
Marker Score: 559 - Cell Name: connective tissue cell (CL0002320)
Fold Change: 0.62
Marker Score: 161
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2609706408
Symbol: CNTN1_HUMAN
Name: Contactin-1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 8164510
Title: Identification and characterization of the human cell adhesion molecule contactin.
PubMed ID: 8164510
PubMed ID: 7959734
Title: Molecular cloning and in situ localization of the human contactin gene (CNTN1) on chromosome 12q11-q12.
PubMed ID: 7959734
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 2026173
Title: Isolation and characterization of a membrane glycoprotein from human brain with sequence similarities to cell adhesion proteins from chicken and mouse.
PubMed ID: 2026173
PubMed ID: 16335952
Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.
PubMed ID: 16335952
DOI: 10.1021/pr0502065
PubMed ID: 19139490
Title: A strategy for precise and large scale identification of core fucosylated glycoproteins.
PubMed ID: 19139490
PubMed ID: 20133774
Title: The protein tyrosine phosphatases PTPRZ and PTPRG bind to distinct members of the contactin family of neural recognition molecules.
PubMed ID: 20133774
PubMed ID: 16959974
Title: The consensus coding sequences of human breast and colorectal cancers.
PubMed ID: 16959974
PubMed ID: 19026398
Title: Mutations in contactin-1, a neural adhesion and neuromuscular junction protein, cause a familial form of lethal congenital myopathy.
PubMed ID: 19026398
Sequence Information:
- Length: 1018
- Mass: 113320
- Checksum: 4B8FDC5BFD434ED5
- Sequence:
MKMWLLVSHL VIISITTCLA EFTWYRRYGH GVSEEDKGFG PIFEEQPINT IYPEESLEGK VSLNCRARAS PFPVYKWRMN NGDVDLTSDR YSMVGGNLVI NNPDKQKDAG IYYCLASNNY GMVRSTEATL SFGYLDPFPP EERPEVRVKE GKGMVLLCDP PYHFPDDLSY RWLLNEFPVF ITMDKRRFVS QTNGNLYIAN VEASDKGNYS CFVSSPSITK SVFSKFIPLI PIPERTTKPY PADIVVQFKD VYALMGQNVT LECFALGNPV PDIRWRKVLE PMPSTAEIST SGAVLKIFNI QLEDEGIYEC EAENIRGKDK HQARIYVQAF PEWVEHINDT EVDIGSDLYW PCVATGKPIP TIRWLKNGYA YHKGELRLYD VTFENAGMYQ CIAENTYGAI YANAELKILA LAPTFEMNPM KKKILAAKGG RVIIECKPKA APKPKFSWSK GTEWLVNSSR ILIWEDGSLE INNITRNDGG IYTCFAENNR GKANSTGTLV ITDPTRIILA PINADITVGE NATMQCAASF DPALDLTFVW SFNGYVIDFN KENIHYQRNF MLDSNGELLI RNAQLKHAGR YTCTAQTIVD NSSASADLVV RGPPGPPGGL RIEDIRATSV ALTWSRGSDN HSPISKYTIQ TKTILSDDWK DAKTDPPIIE GNMEAARAVD LIPWMEYEFR VVATNTLGRG EPSIPSNRIK TDGAAPNVAP SDVGGGGGRN RELTITWAPL SREYHYGNNF GYIVAFKPFD GEEWKKVTVT NPDTGRYVHK DETMSPSTAF QVKVKAFNNK GDGPYSLVAV INSAQDAPSE APTEVGVKVL SSSEISVHWE HVLEKIVESY QIRYWAAHDK EEAANRVQVT SQEYSARLEN LLPDTQYFIE VGACNSAGCG PPSDMIEAFT KKAPPSQPPR IISSVRSGSR YIITWDHVVA LSNESTVTGY KVLYRPDGQH DGKLYSTHKH SIEVPIPRDG EYVVEVRAHS DGGDGVVSQV KISGAPTLSP SLLGLLLPAF GILVYLEF
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.