Genular: Defining Cellular Identity and Function

Details for: Col10a1

Gene ID: 12813

Symbol: Col10a1

Ensembl ID: ENSMUSG00000039462

Description: collagen, type X, alpha 1

Associated with

Assembly of collagen fibrils and other multimeric structures
(R-MMU-2022090)
Collagen biosynthesis and modifying enzymes
(R-MMU-1650814)
Collagen chain trimerization
(R-MMU-8948216)
Collagen degradation
(R-MMU-1442490)
Collagen formation
(R-MMU-1474290)
Degradation of the extracellular matrix
(R-MMU-1474228)
Non-integrin membrane-ecm interactions
(R-MMU-3000171)
Cartilage development
(GO:0051216)
Cell cortex
(GO:0005938)
Collagen-containing extracellular matrix
(GO:0062023)
Collagen trimer
(GO:0005581)
Collagen type x trimer
(GO:0005599)
Endochondral ossification
(GO:0001958)
Extracellular matrix
(GO:0031012)
Extracellular matrix organization
(GO:0030198)
Extracellular matrix structural constituent conferring tensile strength
(GO:0030020)
Extracellular region
(GO:0005576)
Extracellular space
(GO:0005615)
Metal ion binding
(GO:0046872)
Receptor complex
(GO:0043235)

Other Information

Proteins

Collagen alpha-1(X) chain

Genular Protein ID: 3940499985

Symbol: COAA1_MOUSE

Name: Collagen alpha-1(X) chain

UniProtKB Accession Codes:

Q05306

Database IDs:

Citations:

PubMed ID: 8424763

Title: The mouse collagen X gene: complete nucleotide sequence, exon structure and expression pattern.

PubMed ID: 8424763

DOI: 10.1042/bj2890247

PubMed ID: 8477738

Title: Intron-exon structure, alternative use of promoter and expression of the mouse collagen X gene, Col10a-1.

PubMed ID: 8477738

DOI: 10.1111/j.1432-1033.1993.tb17739.x

PubMed ID: 8492743

Title: Characterization of the mouse type X collagen gene.

PubMed ID: 8492743

DOI: 10.1016/s0934-8832(11)80075-2

PubMed ID: 1587271

Title: Cloning of the human and mouse type X collagen genes and mapping of the mouse type X collagen gene to chromosome 10.

PubMed ID: 1587271

DOI: 10.1111/j.1432-1033.1992.tb16919.x

PubMed ID: 1543751

Title: Specific hybridization probes for mouse alpha 2(IX) and alpha 1(X) collagen mRNAs.

PubMed ID: 1543751

DOI: 10.1016/0167-4781(92)90465-c

Sequence Information:

Length: 680
Mass: 66775
Checksum: FE984CA99AF708E2
Sequence:

MLPQIPFLLL MFLTLVHGMF YAERYQTPTG IKGPLASPKT QYFIPYAIKS KGIPVRGEQG 
IPGPPGPTGP RGHPGPSGPP GKPGYGSPGL QGEPGLPGPP GISATGKPGL PGPPGKPGER 
GPYGHKGDIG PAGLPGPRGP PGPPGIPGPA GISVPGKPGQ QGLTGAPGPR GFPGEKGAQG 
APGVNGRKGE TGYGSPGRPG ERGLPGPQGP IGPPGPSGVG RRGENGFPGQ PGIKGDRGFP 
GEMGPSGPPG PQGPPGKQGR EGIGKPGAIG SPGQPGIPGE KGHPGAPGIA GPPGAPGFGK 
QGLPGLRGQR GPAGLPGAPG AKGERGPAGH PGEPGLPGSP GNMGPQGPKG IPGNHGIPGA 
KGEIGLVGPA GPPGARGARG PPGLDGKTGY PGEPGLNGPK GNPGLPGQKG DPGVGGTPGL 
RGPVGPVGAK GVPGHNGEAG PRGEPGIPGT RGPTGPPGVP GFPGSKGDPG NPGAPGPAGI 
ATKGLNGPTG PPGPPGPRGH SGEPGLPGPP GPPGPPGQAV MPDGFIKAGQ RPRLSGMPLV 
SANHGVTGMP VSAFTVILSK AYPAVGAPIP FDEILYNRQQ HYDPRSGIFT CKIPGIYYFS 
YHVHVKGTHV WVGLYKNGTP TMYTYDEYSK GYLDQASGSA IMELTENDQV WLQLPNAESN 
GLYSSEYVHS SFSGFLVAPM

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Col10a1

Associated with

Other Information

The mouse collagen X gene: complete nucleotide sequence, exon structure and expression pattern. PubMed ID: 8424763

Intron-exon structure, alternative use of promoter and expression of the mouse collagen X gene, Col10a-1. PubMed ID: 8477738

Characterization of the mouse type X collagen gene. PubMed ID: 8492743