Details for: Col17a1

Gene ID: 12821

Symbol: Col17a1

Ensembl ID: ENSMUSG00000025064

Description: collagen, type XVII, alpha 1

Associated with

Other Information

Genular Protein ID: 3861328584

Symbol: COHA1_MOUSE

Name: Collagen alpha-1(XVII) chain

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8473327

Title: Cloning of type XVII collagen: complementary and genomic DNA sequences of mouse 180-kDa bullous pemphigoid antigen (BPAG2) predict an interrupted collagenous domain, a transmembrane segment, and unusual features in the 5'-end of the gene and the 3' -.

PubMed ID: 8473327

DOI: 10.1016/s0021-9258(18)52948-3

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

Sequence Information:

  • Length: 1470
  • Mass: 147975
  • Checksum: 7C38356D6ED68347
  • Sequence:
  • MDVTKKSKRD GTEVTERIVT ETVTTRLTSL PPKGSTSNGY AKTGSLGGGS RLEKQSLTHG 
    SSGYINSSGS IRGNASTSSY RRTHSPASTL PNSPGSTFER KAHMTRHGTY EGSSSGNSSP 
    EYPRKELASS STRGRSQTRE SEIRVRLQSA SPSTRWTELD EVKRLLKGSR SASASPTRNT 
    SNTLPIPKKG TVETKTVTAS SHSVSGTYDS AILDTNFPPH MWSSTLPAGS SLGTYQNNIT 
    AQSTSLLNTN AYSTGSVFGV PNNMASCSPT LHPGLSSCSS VFGMQNNLAP SSSVLSHGTT 
    TASTAYGAKK NVPQPPTVTS TGVSTSATCT TSVQSDDLLH KDCKFLILEK DNTPAKKEME 
    LLIMTKDSGK VFTASPATIS STSFSEDTLK KEKQAAYAAD TCLKADVNGD LNTVSTKSKM 
    TSAENHGYDR GGGGGRGKGG GAGGGGGGGG ASGGGGAWGA APAWCPCGSC CSWWKWLLGL 
    LLTWLLLLGL LFGLIALAEE VRKLKARVEE LEKTKVLYHD VQMDKSNRDR LQAEAPSLGP 
    GLGKAELDGY SQEAIWLFVR NKLMTEQENG NLRGSPGPKG DMGSQGPKGD RGLPGTPGIP 
    GPLGHPGPEG PKGQKGSIGD PGMEGPIGQR GLAGPMGPRG EPGPPGSGEK GDRGIAGEQG 
    PQGLPGVPGP PGLRGHSGSP GPQGPPGAVG PQGLRGDVGL PGVKGDKGLM GPPGPKGDQG 
    EKGPRGLTGE PGIRGLPGAV GEPGAKGAMG PAGADGQQGS RGEQGLTGMP GTRGPPGPAG 
    DPGKPGLTGP QGPQGLPGSP GRPGTKGEPG APGRVMTSEG SSTITVPGPP GPPGAMGPPG 
    PPGTPGPAGP AGLPGQQGPR GEPGLAGDSF LSSGSSISEV LSAQGVDLRG PPGPPGPRGP 
    PGPSIPGPPG PRGPPGEGVP GPPGPPGSFL TDSETFFTGP PGPPGPPGPK GDQGDPGVPG 
    TPGISGGLSH GASSSTLYMQ GPPGPPGPPG PPGSLSSSGQ DIQHYIAEYM QSDNIRTYLS 
    GVQGPPGPPG PPGPVITITG ETFDYSQLAS QVVSYLRSSG YGAGLSSASS SEDILAMLRR 
    NDVWQYLRQN LVGPPGPPGP PGVSGDGSLL SLDYGELSRH ILNYMSSSGI SFGHPGPPGP 
    PGLPGTSYEE LLTMLRGSDY RNIIGPPGPP GPPGMPGNAW SSISVEDLSS YLHTAGLSSI 
    PGPPGPPGPP GPRGPPGVSA ALSTYAAENS DNFRSELISY LTSPDVRSFI VGPPGPPGPQ 
    GPPGDGHLRE NYNWSSNSSA RRGTSYSSST GTGGTNGGSL GEGGAYGAGD GGPYGTDIGP 
    GGGYGAAAGG GIYGTNGDSF RDGFTGDLDY NKLAVRVSES MQRQGLLQGM AYTVQGPPGP 
    QGPPGISRVF SAYSNVTQDL MDFFQTYGTI PGPPGQKGDV GTPGPKGDRG PAGPRGPPGP 
    PGPRGNKGEK GDKGDQVYTG RRKRSIAIKP

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.