Genular: Defining Cellular Identity and Function

Details for: Col6a1

Gene ID: 12833

Symbol: Col6a1

Ensembl ID: ENSMUSG00000001119

Description: collagen, type VI, alpha 1

Associated with

Assembly of collagen fibrils and other multimeric structures
(R-MMU-2022090)
Axon guidance
(R-MMU-422475)
Collagen biosynthesis and modifying enzymes
(R-MMU-1650814)
Collagen chain trimerization
(R-MMU-8948216)
Collagen degradation
(R-MMU-1442490)
Collagen formation
(R-MMU-1474290)
Degradation of the extracellular matrix
(R-MMU-1474228)
Developmental biology
(R-MMU-1266738)
Ecm proteoglycans
(R-MMU-3000178)
Extracellular matrix organization
(R-MMU-1474244)
Integrin cell surface interactions
(R-MMU-216083)
Ncam1 interactions
(R-MMU-419037)
Ncam signaling for neurite out-growth
(R-MMU-375165)
Nervous system development
(R-MMU-9675108)
Signaling by pdgf
(R-MMU-186797)
Signaling by receptor tyrosine kinases
(R-MMU-9006934)
Signal transduction
(R-MMU-162582)
2-oxoglutarate metabolic process
(GO:0006103)
Adipose tissue development
(GO:0060612)
Apoptotic nuclear changes
(GO:0030262)
Apoptotic process
(GO:0006915)
Autophagy
(GO:0006914)
Bone development
(GO:0060348)
Bone mineralization
(GO:0030282)
Canonical wnt signaling pathway
(GO:0060070)
Cartilage development
(GO:0051216)
Cell adhesion
(GO:0007155)
Cell death
(GO:0008219)
Cell morphogenesis
(GO:0000902)
Circadian rhythm
(GO:0007623)
Collagen binding
(GO:0005518)
Collagen fibril organization
(GO:0030199)
Collagen metabolic process
(GO:0032963)
Energy reserve metabolic process
(GO:0006112)
Extracellular matrix structural constituent conferring tensile strength
(GO:0030020)
Gene expression
(GO:0010467)
Glycolytic process
(GO:0006096)
Hair follicle development
(GO:0001942)
Heart development
(GO:0007507)
Homeostasis of number of cells
(GO:0048872)
Inflammatory response
(GO:0006954)
Insulin-like growth factor receptor signaling pathway
(GO:0048009)
Insulin receptor signaling pathway
(GO:0008286)
Limb joint morphogenesis
(GO:0036022)
Lung alveolus development
(GO:0048286)
Lung development
(GO:0030324)
Lung epithelial cell differentiation
(GO:0060487)
Lung morphogenesis
(GO:0060425)
Metabolic process
(GO:0008152)
Mitochondrial depolarization
(GO:0051882)
Mitochondrion organization
(GO:0007005)
Muscle cell apoptotic process
(GO:0010657)
Muscle cell development
(GO:0055001)
Muscle organ development
(GO:0007517)
Muscle system process
(GO:0003012)
Myelination in peripheral nervous system
(GO:0022011)
Nervous system process
(GO:0050877)
Neuron apoptotic process
(GO:0051402)
Organelle organization
(GO:0006996)
Ossification
(GO:0001503)
Peripheral nervous system development
(GO:0007422)
Phosphatidylinositol 3-kinase/protein kinase b signal transduction
(GO:0043491)
Platelet-derived growth factor binding
(GO:0048407)
Protein binding
(GO:0005515)
Protein lipidation
(GO:0006497)
Protein phosphorylation
(GO:0006468)
Protein tetramerization
(GO:0051262)
Reduction of food intake in response to dietary excess
(GO:0002023)
Regulation of cell size
(GO:0008361)
Respiratory system process
(GO:0003016)
Response to activity
(GO:0014823)
Response to decreased oxygen levels
(GO:0036293)
Response to lipid
(GO:0033993)
Response to lipopolysaccharide
(GO:0032496)
Response to mechanical stimulus
(GO:0009612)
Response to muscle activity
(GO:0014850)
Response to pain
(GO:0048265)
Response to reactive oxygen species
(GO:0000302)
Response to toxic substance
(GO:0009636)
Response to uv
(GO:0009411)
Response to wounding
(GO:0009611)
Response to xenobiotic stimulus
(GO:0009410)
Sensory perception of mechanical stimulus
(GO:0050954)
Single fertilization
(GO:0007338)
Skeletal muscle fiber development
(GO:0048741)
Skeletal muscle organ development
(GO:0060538)
Skeletal muscle tissue development
(GO:0007519)
Skeletal muscle tissue growth
(GO:0048630)
Skeletal muscle tissue regeneration
(GO:0043403)
Skin development
(GO:0043588)
Tissue remodeling
(GO:0048771)
Transmission of nerve impulse
(GO:0019226)
Tricarboxylic acid cycle
(GO:0006099)
Uterus development
(GO:0060065)

Other Information

Proteins

Collagen alpha-1(VI) chain
B0LAD9_MOUSE

Genular Protein ID: 666395497

Symbol: CO6A1_MOUSE

Name: Collagen alpha-1(VI) chain

UniProtKB Accession Codes:

Q04857

Database IDs:

Citations:

PubMed ID: 8326912

Title: Murine alpha 1(VI) collagen chain. Complete amino acid sequence and identification of the gene promoter region.

PubMed ID: 8326912

DOI: 10.1016/s0934-8832(11)80006-5

PubMed ID: 8489506

Title: Cloning and sequence analysis of cDNAs encoding the alpha 1, alpha 2 and alpha 3 chains of mouse collagen VI.

PubMed ID: 8489506

DOI: 10.1042/bj2910787

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

Sequence Information:

Length: 1025
Mass: 108489
Checksum: 2A05DFED8771BBF7
Sequence:

MRLAHALLPL LLQACWVATQ DIQGSKAIAF QDCPVDLFFV LDTSESVALR LKPYGALVDK 
VKSFTKRFID NLRDRYYRCD RNLVWNAGAL HYSDEVEIIR GLTRMPSGRD ELKASVDAVK 
YFGKGTYTDC AIKKGLEELL IGGSHLKENK YLIVVTDGHP LEGYKEPCGG LEDAVNEAKH 
LGIKVFSVAI TPDHLEPRLS IIATDHTYRR NFTAADWGHS RDAEEVISQT IDTIVDMIKN 
NVEQVCCSFE CQAARGPPGP RGDPGYEGER GKPGLPGEKG EAGDPGRPGD LGPVGYQGMK 
GEKGSRGEKG SRGPKGYKGE KGKRGIDGVD GMKGETGYPG LPGCKGSPGF DGIQGPPGPK 
GDAGAFGMKG EKGEAGADGE AGRPGNSGSP GDEGDPGEPG PPGEKGEAGD EGNAGPDGAP 
GERGGPGERG PRGTPGVRGP RGDPGEAGPQ GDQGREGPVG IPGDSGEAGP IGPKGYRGDE 
GPPGPEGLRG APGPVGPPGD PGLMGERGED GPPGNGTEGF PGFPGYPGNR GPPGLNGTKG 
YPGLKGDEGE VGDPGEDNND ISPRGVKGAK GYRGPEGPQG PPGHVGPPGP DECEILDIIM 
KMCSCCECTC GPIDILFVLD SSESIGLQNF EIAKDFIIKV IDRLSKDELV KFEPGQSHAG 
VVQYSHNQMQ EHVDMRSPNV RNAQDFKEAV KKLQWMAGGT FTGEALQYTR DRLLPPTQNN 
RIALVITDGR SDTQRDTTPL SVLCGADIQV VSVGIKDVFG FVAGSDQLNV ISCQGLSQGR 
PGISLVKENY AELLDDGFLK NITAQICIDK KCPDYTCPIT FSSPADITIL LDSSASVGSH 
NFETTKVFAK RLAERFLSAG RADPSQDVRV AVVQYSGQGQ QQPGRAALQF LQNYTVLASS 
VDSMDFINDA TDVNDALSYV TRFYREASSG ATKKRVLLFS DGNSQGATAE AIEKAVQEAQ 
RAGIEIFVVV VGPQVNEPHI RVLVTGKTAE YDVAFGERHL FRVPNYQALL RGVLYQTVSR 
KVALG

Genular Protein ID: 2654058380

Symbol: B0LAD9_MOUSE

Name: N/A

UniProtKB Accession Codes:

B0LAD9

Database IDs:

Sequence Information:

Length: 165
Mass: 17758
Checksum: 683731D444426BBC
Sequence:

TRDRLLPPTQ NNRIALVITD GRSDTQRDTT PLSVLCGADI QVVSVGIKDV FGFVAGSDQL 
NVISCQGLSQ GRPGISLVKE NYAELLDDGF LKNITAQICI DKKCPDYTCP ITFSSPADIT 
ILLDSSASVG SHNFETTKVF AKRLAERFLS AGRADPSQDV RVAVV

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.