Details for: Col6a3

Gene ID: 12835

Symbol: Col6a3

Ensembl ID: ENSMUSG00000048126

Description: collagen, type VI, alpha 3

Associated with

Other Information

Genular Protein ID: 2600166148

Symbol: J3QQ16_MOUSE

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

Sequence Information:

  • Length: 2677
  • Mass: 288695
  • Checksum: F5D7F5DDBDBAAAF3
  • Sequence:
  • MRKHRHLPLV AVFSLLLSGI ATTHAQQHGV MEVNKRDIVF LVDGSSSLGP SNFNAIRDFV 
    TRVIQRLEIG QDLVQVSVAQ YADTVKPEFY LNSYTNKRDA ITAVRKMRAL NGSALYTGSS 
    LDFVRNNLFT SSAGHRAAEG VPKLLVLITG GKSLDEVSQP AQELKRGSIM ALAVGSKAAD 
    EDELKEIAFD SSLVFIPAEF RPAPLQNMLP SLMAPLRTLT GTTEESKRDI LFLFDGSVNV 
    LGQFPAVRDF LYRIIEELDV KPDGTRVAIA QFSDDVRLES RFSEHQTKAE ILNLVKKMKL 
    KTGKALNLGY ALDYALRNIF VRSAGSRIED NVQQFLVLLV AGRSSDAVAG PASSLKQRGV 
    VPFIFQAKNA NPSELEQIVL SPAFILAAES LPKIGDLQSQ IVSLLKAEQG SGPVSGEKDV 
    VFLIDGSEGV RSGFPLLKDF VQRVVESLDV GPDRVRVALV QYSDRTRPEF YLNSHMDQQG 
    VISAIRRLTL LGGPTPNTGA ALEFVLRNIL TSSTGSRIAE GVPQLLIVLT AEPSGDDVRG 
    PSVVLKQGGA VPIGIGIGNA DISEMQTISF IPDFAVAIPT FRELGTIQQV ISERVIQLNR 
    EELSSLKPIL TPSTGAGVGS KKDVVFLIDG SRNAGPEFQY IRTLIERIVE YLDIGFDTTR 
    VAVIQFSEDS KMEFPLNAHF SKDEVQNAVR RLRPKGGSQV YIGNALEYVL KNIFQRPLGS 
    RIEEGVPQFL VLISSGKSDD EVDDSAVELK QFGVAPLTIA RHTDQEELVK ISLSPEYVYS 
    VSTFRELPRL EQKLLTPITT LTSQQIHQIL ASTRYPPSVV ESDAADIVFL IDSSDAVKPD 
    GIAHIRDFVS RIVRRLNIGP SKVRIGVVQF SNDVFPEFYL KTHKSQSSVL EAIRRLRFKG 
    GSPLNTGRAL EFVARNLFVK SAGSRIEDGV PQHLVLFLGG KSQDDVARHA QVISSSGIVS 
    LGIGDRNIDR TDLQTITNDP RLVFTVREFR ELPNIEERVM LSFGPSGATP QPPGVDLPSP 
    SRPEKKKADI VFLLDGSINF RRDSFQEVLR FASEIVDTVY EDGDSIRVGL VQYNSDPTDE 
    FFLRDFSTKR QIIDAINKVV YKGGRHANTR VGIEHLLRNH FVPEAGSRLD ERVPQIAFVI 
    TGGKSVEDAQ DVSLALTQKG VKVFAVGVRN IDSEEVGKIA SNSATAFRVG SVQELSELSE 
    TVLETLHDAM HETLCPGVTD VSKACNLEVI LGFDGSRDQN VFVSQKGLES KVDIILNRIS 
    QIQRISCSGN QLPTVRVSVM ANTPSGPVEA FDFAEYQPEL FEKFRNMRSQ RPYVLTADTL 
    KLYQNKFRQS SPDTVKVVIH FTDGADGDMA DLYRASEELR QAGAQALILV GLERVANLER 
    LMHLEFGRGF MYDRPLRLNL LDLDYELAEQ LDNIAEKACC GVPCKCSGER GDRGPIGSIG 
    PKGISGEDGY RGYPGDEGGP GERGPPGVNG TQGFQGCPGQ RGVKGSRGFP GEKGELGEIG 
    LDGLDGEEGD KGLPGSSGEK GSPGRRGDKG PKGDKGERGD VGIRGDPGDS GRDSQQRGPK 
    GETGDIGPMG LPGRDGIPGS PGDPGKDGGS GRRGPAGAKG NRGGPGQPGF EGEQGTRGSQ 
    GPPGPIGPPG LIGEQGIPGP RGGGGTAGAP GERGRTGPLG RKGEPGEPGP KGSIGNRGPR 
    GETGDDGRDG VGSEGRRGKK GERGFPGYPG PKGTPGEPGA DGPPGPKGIR GRRGNSGPPG 
    ATGQKGDPGY PGPSGHKGNR GDSVDQCALI QSIRDKCPCC YGPLECPVFP TELAFALDTS 
    EGVTQDTFSR MREVLLGIVG DLTIAESNCP RGARVAVVTY NNEVTTEIRF ADSKKKSALL 
    DSIQNLQVAL TSKQQSLETA MSFVARNTFK RVRSGFLMRK VAVFFSNKPT RASPQLREAV 
    LKLSDAGITP LFLTSQEDRQ LINALQINNT AVGHALVLPA RRDLTDFLKN VLTCHVCLDI 
    CNIDPSCGFG SWRPSFRDRR AAGSDVDIDL AFILDSSEAT TLFQFNEMKK YIGYVIRQLD 
    LSPDPKASQH FARVAVVQQS TYESVDNASV PPVKVEFSLT DYGAKEKLLD FLSRRMTQLQ 
    GTMGLGNAIE YTIENIFESA PNPRDLKIMV LMLTGDMQRQ QLEEAQRAIL QAKCKGYFFV 
    VLGIGRKVNI KEVYSFASEP NDVFFKFVDK STELNEEPLM RFGRLLPSFV SSENAFYLPP 
    DLRKQCDWFQ GDQPVKNGVK FGHKQINPPH TANSSLTSKV VTTMKPVTTT KPTAIVNLPP 
    AKPAPARPAP AQPVLAKPDP AKPAQARPAP AKPASAKLVP PQPVHVQPAP AQTASVRPAP 
    AKPAPPQPAA AKPVPAKPAV PAQPAPPQPA AAKPVPAKPA VPAQPAPPQP AAAKPVPAKP 
    AVPAQPAAAQ PMPAQPVLTK SAAVKPASAN KPVAAKPVAT NTATATARPA LAAKPAAAKP 
    AATRPLAAAI RPVATKPEAP RQQAKPAATK PATTKPLARV SREVQVSEVT ENSARLHWER 
    PEPSSSFFYD LTVTSAHDQS LVLRQNLTVT DRVIGGLLAG QLYHVVVVSY LQSQVRAIYQ 
    GSFNTKKTQP PPLQAAHRAS SSTINLMVNT EPLFLTKTDI CKLSRDAGTC VDFKLLWHYD 
    LESKSCKRFW YGGCGGNENR FHSQEECEKM CSPELTV

Genular Protein ID: 3330381402

Symbol: Q9Z0I9_MOUSE

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 12009329

Title: Alternative splicing of transcripts for the alpha 3 chain of mouse collagen VI: identification of an abundant isoform lacking domains N7-N10 in mouse and human.

PubMed ID: 12009329

DOI: 10.1016/S0945-053X(02)00009-4

Sequence Information:

  • Length: 1703
  • Mass: 185783
  • Checksum: 38A14AD16EE75526
  • Sequence:
  • MRKHRHLPLV AVFSLLFSGI AMTRAQQHGD VKNGAAADIV FLVDSSWSAG KDRFLLVQEF 
    LSDVVESLAV GDNDFHFALV RLNGNPHTEF LLNTYHSKQE VLSHIANMSY IGGSNQTGKG 
    LEYVIHSHLT EASGSRAADG VPQVIVVLTD GQSEDGFALP SAELKSADVN VFAVGVEGAD 
    ERALGEVASE PLSMHVFNLE NVTSLHGLVG NLVSCIHSSV NPERAGDKES LKDITAQDSA 
    DIIFLIDGSQ NTGNANFDVI RDFLVNVLER LSVGNQQVQV GVVQYSEEPI TMFSLNSYPS 
    KAAVLDAVKG LSLVGGESAN IGQALDFVVE NHFTRAGGSR VEEGVPQVLV LISAGPSSDE 
    IRDSVVALKQ ASVFSFGLGA QAASRAELQH IATDDSLVFT VPEFRSFGDL QEQILPYLVG 
    VAQRHIVLQP PAIVTQVMEV NKRDIVFLVD GSSSLGPSNF NAIRDFVTRV IQRLEIGQDL 
    VQVSVAQYAD TVKPEFYLNS YTNKRDAVTA VRKMRALNGS ALYTGSSLDF VRNNLFTSSA 
    GHRAAEGVPK LLVLITGGKS LDEVSQPAQE LKRGSIMALA VGSKAADEDE LKEIAFDSSL 
    VFIPAEFRPA PLQNMLPSLM APLRTLTGTT EVHVNKRDII FLLDGSDNVG KNNFPYVRDF 
    VTNLVNSLDV GSDNIRVGLV QFSDTPVTEF SLDTYQTKSE LLAHLRRLQL KGGSGLNAGS 
    ALSYIHANHF TEAGGSRTRE HVPQLLLLLM AGPSEDAYLQ AANALVRSGV LTFCVGTNRA 
    DKAELEHIAF NPSLVYLMDD FRSLPSLPQQ LIQPLTTYVS GGVQEVPLSQ PESKRDILFL 
    FDGSVNVLGQ FPAVRDFLYR IIEELDVKPD GTRVAIAQFS DDVRLESRFS EHQTKAEILN 
    LVKKMKLKTG KALNLGYALD YALRNIFVRS AGSRIEDNVQ QFLVLLVAGR SSDAVAGPAS 
    SLKQRGVVPF IFQAKNANPS ELEQIVLSPA FILAAESLPK IGDLQSQIVS LLKAEQGSGP 
    VSGEKDVVFL IDGSEGVRSG FPLLKDFVQR VVESLDVGPD RVRVALVQYS DRTRPEFYLN 
    SHMDQQGVIS AIRRLTLLGG PTPNTGAALE FVLRNILTSS TGSRIAEGVP QLLIVLTAEP 
    SGDDVRGPSV VLKQGGAVPI GIGIGNADIS EMQTISFIPD FAVAIPTFRE LGTIQQVISE 
    RVIQLNREEL SSLKPILTPS TGAGVGSKKD VVFLIDGSRN AGPEFQYIRT LIERIVEYLD 
    IGFDTTRVAV IQFSEDSKME FPLNAHFSKD EVQNAVRRLR PKGGSQVYIG NALEYVLKNI 
    FQRPLGSRIE EGVPQFLVLI SSGKSDDEVD DSAVELKQFG VAPLTIARHT DQEELVKISL 
    SPEYVYSVST FRELPRLEQK LLKPITTLTS QQIHQILAST RYPPSVVESD AADIVFLIDS 
    SDAVKPDGIA HIRDFVSRIV RRLNIGPSKV RIGVVQFSND VFPEFYLKTH KSQSSVLEAI 
    RRLRFKGGSP LNTGRALEFV ARNLFVKSAG SRIEDGVPQH LVLFLGGKSQ DDVARHAQVI 
    SSSGIVSLGI GDRNIDRTDL QTITNDPRLV FTVREFRELP NIEERVMLSF GPSGATPQPP 
    GVDLPSPSRP EKKKADIVFL LDGSINFRRD SFQEVLRFAS EIVDTVYEDG DSIRVGLVQY 
    NSDPTDEFFL RDFSTKRQII DAI

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.