Details for: Atf6b

Gene ID: 12915

Symbol: Atf6b

Ensembl ID: ENSMUSG00000015461

Description: activating transcription factor 6 beta

Associated with

  • Atf6b (atf6-beta) activates chaperones
    (R-MMU-8874177)
  • Cellular responses to stimuli
    (R-MMU-8953897)
  • Cellular responses to stress
    (R-MMU-2262752)
  • Unfolded protein response (upr)
    (R-MMU-381119)
  • Dna-binding transcription activator activity, rna polymerase ii-specific
    (GO:0001228)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Endoplasmic reticulum
    (GO:0005783)
  • Endoplasmic reticulum membrane
    (GO:0005789)
  • Endoplasmic reticulum unfolded protein response
    (GO:0030968)
  • Intracellular anatomical structure
    (GO:0005622)
  • Membrane
    (GO:0016020)
  • Negative regulation of atf6-mediated unfolded protein response
    (GO:1903892)
  • Nucleus
    (GO:0005634)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Protein-dna complex
    (GO:0032993)
  • Protein binding
    (GO:0005515)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Response to endoplasmic reticulum stress
    (GO:0034976)
  • Response to unfolded protein
    (GO:0006986)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Rna polymerase ii transcription regulator complex
    (GO:0090575)
  • Sequence-specific double-stranded dna binding
    (GO:1990837)
  • Transcription cis-regulatory region binding
    (GO:0000976)

Other Information

Genular Protein ID: 386608230

Symbol: Q3UJ07_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q3UJ07

Database IDs:

AGR 1 ARBA 5 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 4 GO 2 Gene3D 1 InterPro 2 KEGG 1 MGI 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 3 Pfam 1 RefSeq 1 SAM 2 SMART 1 SMR 1 SUPFAM 1

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

  • Length: 699
  • Mass: 76007
  • Checksum: 6EBE22386D63868B
  • Sequence:
    • MAELMLLSEI ADPTRFFTDN LLSPEDWDST LYSGLDEVAE EQAQLFRCVE QDVPFDSSSL 
DVGMDVSPPE PPWDPLPIFP DLQVKSEPSS PCSSSSLSSE SSHLSTEPPS QVPGVGEVLH 
VKMESLAPPL CLLGDDPASP FETVQITVGS ASDDLSDIQT KLEPASPSSS VHSEASLLSA 
DSPSQPFIGE EVLEVKTESP SPPGCLLWDV PASSLGAVQI SMGPSPDSSS GKAPATRKPP 
LQPKPVVLTT VPVPPRAGPT SAAVLLQPLV QQPAVSPVVL IQGAIRVQPE GPAPAAPRPE 
RKSIVPAPMP GNSCPPEVDA KLLKRQQRMI KNRESACQSR RKKKEYLQGL EARLQAVLAD 
NQQLRRENAA LRRRLEALLA ENSGLKLGSG NRKVVCIMVF LLFIAFNFGP VSISEPPPAP 
MSPRMSREEP RPQRHLLGFS EPGPAHGMEP LREAAQSPGE QQPSSAGRPS FRNLTAFPGG 
AKELLLRDLD QLFLSSDCRH FNRTESLRLA DELSGWVQRH QRGRRKIPHR AQERQKSQLR 
KKSPPVKPVP TQPPGPPERD PVGQLQLYRH PGRSQPEFLD AIDRREDTFY VVSFRRDHLL 
LPAISHNKTS RPKMSLVMPA MAPNETVSGR GPPGDYEEMM QIECEVMDTR VIHIKTSTVP 
PSLRKQPSPS PGNTTGGPLP GSAASPAHQA SQPLYLNHP

Genular Protein ID: 4089738684

Symbol: A0A0A0MQ69_MOUSE

Name: N/A

UniProtKB Accession Codes:

A0A0A0MQ69

Database IDs:

AGR 1 ARBA 5 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EPD 1 Ensembl 2 ExpressionAtlas 1 GO 2 Gene3D 1 GeneTree 1 HOGENOM 1 InterPro 2 KEGG 1 MGI 2 MaxQB 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 3 Pfam 1 Proteomes 2 ProteomicsDB 1 RefSeq 1 SAM 2 SMART 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

Sequence Information:

  • Length: 706
  • Mass: 76594
  • Checksum: 3D58171253376F76
  • Sequence:
    • MVGGGGKMAE LMLLSEIADP TRFFTDNLLS PEDWDSTLYS GLDEVAEEQA QLFRCVEQDV 
PFDSSSLDVG MDVSPPEPPW DPLPIFPDLQ VKSEPSSPCS SSSLSSESSH LSTEPPSQVP 
GVGEVLHVKM ESLAPPLCLL GDDPASPFET VQITVGSASD DLSDIQTKLE PASPSSSVHS 
EASLLSADSP SQPFIGEEVL EVKTESPSPP GCLLWDVPAS SLGAVQISMG PSPDSSSGKA 
PATRKPPLQP KPVVLTTVPV PPRAGPTSAA VLLQPLVQQP AVSPVVLIQG AIRVQPEGPA 
PAAPRPERKS IVPAPMPGNS CPPEVDAKLL KRQQRMIKNR ESACQSRRKK KEYLQGLEAR 
LQAVLADNQQ LRRENAALRR RLEALLAENS GLKLGSGNRK VVCIMVFLLF IAFNFGPVSI 
SEPPPAPMSP RMSREEPRPQ RHLLGFSEPG PAHGMEPLRE AAQSPGEQQP SSAGRPSFRN 
LTAFPGGAKE LLLRDLDQLF LSSDCRHFNR TESLRLADEL SGWVQRHQRG RRKIPHRAQE 
RQKSQLRKKS PPVKPVPTQP PGPPERDPVG QLQLYRHPGR SQPEFLDAID RREDTFYVVS 
FRRDHLLLPA ISHNKTSRPK MSLVMPAMAP NETVSGRGPP GDYEEMMQIE CEVMDTRVIH 
IKTSTVPPSL RKQPSPSPGN TTGGPLPGSA ASPAHQASQP LYLNHP

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.