Details for: COL9A1

Gene ID: 1297

Symbol: COL9A1

Ensembl ID: ENSG00000112280

Description: collagen type IX alpha 1 chain

Associated with

Other Information

Genular Protein ID: 2001509862

Symbol: CO9A1_HUMAN

Name: Collagen alpha-1(IX) chain

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 2209617

Title: The complete primary structure of two distinct forms of human alpha 1 (IX) collagen chains.

PubMed ID: 2209617

DOI: 10.1111/j.1432-1033.1990.tb19279.x

PubMed ID: 9707347

Title: Human COL9A1 and COL9A2 genes. Two genes of 90 and 15 kb code for similar polypeptides of the same collagen molecule.

PubMed ID: 9707347

DOI: 10.1016/s0945-053x(98)90063-4

PubMed ID: 14574404

Title: The DNA sequence and analysis of human chromosome 6.

PubMed ID: 14574404

DOI: 10.1038/nature02055

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 8660302

Title: Collagen type IX from human cartilage: a structural profile of intermolecular cross-linking sites.

PubMed ID: 8660302

DOI: 10.1042/bj3140327

PubMed ID: 2465149

Title: Molecular cloning of rat and human type IX collagen cDNA and localization of the alpha 1(IX) gene on the human chromosome 6.

PubMed ID: 2465149

DOI: 10.1111/j.1432-1033.1989.tb14522.x

PubMed ID: 1690886

Title: The alpha 1 (IX) collagen gene gives rise to two different transcripts in both mouse embryonic and human fetal RNA.

PubMed ID: 1690886

DOI: 10.1073/pnas.87.7.2400

PubMed ID: 17553797

Title: Crystal structure of the N-terminal NC4 domain of collagen IX, a zinc binding member of the laminin-neurexin-sex hormone binding globulin (LNS) domain family.

PubMed ID: 17553797

DOI: 10.1074/jbc.m702514200

PubMed ID: 11565064

Title: A mutation in COL9A1 causes multiple epiphyseal dysplasia: further evidence for locus heterogeneity.

PubMed ID: 11565064

DOI: 10.1086/324023

PubMed ID: 16909383

Title: A new autosomal recessive form of Stickler syndrome is caused by a mutation in the COL9A1 gene.

PubMed ID: 16909383

DOI: 10.1086/506478

PubMed ID: 21421862

Title: Autosomal recessive Stickler syndrome in two families is caused by mutations in the COL9A1 gene.

PubMed ID: 21421862

DOI: 10.1167/iovs.10-7128

PubMed ID: 31090205

Title: Homozygous Type IX collagen variants (COL9A1, COL9A2, and COL9A3) causing recessive Stickler syndrome-Expanding the phenotype.

PubMed ID: 31090205

DOI: 10.1002/ajmg.a.61191

Sequence Information:

  • Length: 921
  • Mass: 91869
  • Checksum: A69BF076127283D0
  • Sequence:
  • MKTCWKIPVF FFVCSFLEPW ASAAVKRRPR FPVNSNSNGG NELCPKIRIG QDDLPGFDLI 
    SQFQVDKAAS RRAIQRVVGS ATLQVAYKLG NNVDFRIPTR NLYPSGLPEE YSFLTTFRMT 
    GSTLKKNWNI WQIQDSSGKE QVGIKINGQT QSVVFSYKGL DGSLQTAAFS NLSSLFDSQW 
    HKIMIGVERS SATLFVDCNR IESLPIKPRG PIDIDGFAVL GKLADNPQVS VPFELQWMLI 
    HCDPLRPRRE TCHELPARIT PSQTTDERGP PGEQGPPGPP GPPGVPGIDG IDGDRGPKGP 
    PGPPGPAGEP GKPGAPGKPG TPGADGLTGP DGSPGSIGSK GQKGEPGVPG SRGFPGRGIP 
    GPPGPPGTAG LPGELGRVGP VGDPGRRGPP GPPGPPGPRG TIGFHDGDPL CPNACPPGRS 
    GYPGLPGMRG HKGAKGEIGE PGRQGHKGEE GDQGELGEVG AQGPPGAQGL RGITGIVGDK 
    GEKGARGLDG EPGPQGLPGA PGDQGQRGPP GEAGPKGDRG AEGARGIPGL PGPKGDTGLP 
    GVDGRDGIPG MPGTKGEPGK PGPPGDAGLQ GLPGVPGIPG AKGVAGEKGS TGAPGKPGQM 
    GNSGKPGQQG PPGEVGPRGP QGLPGSRGEL GPVGSPGLPG KLGSLGSPGL PGLPGPPGLP 
    GMKGDRGVVG EPGPKGEQGA SGEEGEAGER GELGDIGLPG PKGSAGNPGE PGLRGPEGSR 
    GLPGVEGPRG PPGPRGVQGE QGATGLPGVQ GPPGRAPTDQ HIKQVCMRVI QEHFAEMAAS 
    LKRPDSGATG LPGRPGPPGP PGPPGENGFP GQMGIRGLPG IKGPPGALGL RGPKGDLGEK 
    GERGPPGRGP NGLPGAIGLP GDPGPASYGR NGRDGERGPP GVAGIPGVPG PPGPPGLPGF 
    CEPASCTMQA GQRAFNKGPD P

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.