Genular: Defining Cellular Identity and Function

Details for: Opn1mw

Gene ID: 14539

Symbol: Opn1mw

Ensembl ID: ENSMUSG00000031394

Description: opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)

Associated with

Class a/1 (rhodopsin-like receptors)
(R-MMU-373076)
G alpha (i) signalling events
(R-MMU-418594)
Gpcr downstream signalling
(R-MMU-388396)
Gpcr ligand binding
(R-MMU-500792)
Opsins
(R-MMU-419771)
Sensory perception
(R-MMU-9709957)
Signaling by gpcr
(R-MMU-372790)
The retinoid cycle in cones (daylight vision)
(R-MMU-2187335)
Visual phototransduction
(R-MMU-2187338)
Cellular response to light stimulus
(GO:0071482)
G protein-coupled photoreceptor activity
(GO:0008020)
G protein-coupled receptor activity
(GO:0004930)
G protein-coupled receptor signaling pathway
(GO:0007186)
Identical protein binding
(GO:0042802)
Membrane
(GO:0016020)
Photoreceptor activity
(GO:0009881)
Photoreceptor outer segment
(GO:0001750)
Phototransduction
(GO:0007602)
Plasma membrane
(GO:0005886)
Protein binding
(GO:0005515)
Response to stimulus
(GO:0050896)
Signal transduction
(GO:0007165)
Visual perception
(GO:0007601)

Other Information

Proteins

Medium-wave-sensitive opsin 1
Q3UEX0_MOUSE

Genular Protein ID: 1574919484

Symbol: OPSG_MOUSE

Name: Medium-wave-sensitive opsin 1

UniProtKB Accession Codes:

O35599 Q548Z4

Database IDs:

Citations:

PubMed ID: 9238068

Title: Mechanisms of spectral tuning in the mouse green cone pigment.

PubMed ID: 9238068

DOI: 10.1073/pnas.94.16.8860

PubMed ID: 11055434

Title: The murine cone photoreceptor: a single cone type expresses both S and M opsins with retinal spatial patterning.

PubMed ID: 11055434

DOI: 10.1016/s0896-6273(00)00062-3

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 23001562

Title: Loss of CRB2 in the mouse retina mimics human retinitis pigmentosa due to mutations in the CRB1 gene.

PubMed ID: 23001562

DOI: 10.1093/hmg/dds398

PubMed ID: 30948514

Title: Human red and green cone opsins are O-glycosylated at an N-terminal Ser/Thr-rich domain conserved in vertebrates.

PubMed ID: 30948514

DOI: 10.1074/jbc.ra118.006835

Sequence Information:

Length: 359
Mass: 40218
Checksum: 1BB5F531A6FAE357
Sequence:

MAQRLTGEQT LDHYEDSTHA SIFTYTNSNS TKGPFEGPNY HIAPRWVYHL TSTWMILVVV 
ASVFTNGLVL AATMRFKKLR HPLNWILVNL AVADLAETII ASTISVVNQI YGYFVLGHPL 
CVIEGYIVSL CGITGLWSLA IISWERWLVV CKPFGNVRFD AKLATVGIVF SWVWAAIWTA 
PPIFGWSRYW PYGLKTSCGP DVFSGTSYPG VQSYMMVLMV TCCIFPLSII VLCYLQVWLA 
IRAVAKQQKE SESTQKAEKE VTRMVVVMVF AYCLCWGPYT FFACFATAHP GYAFHPLVAS 
LPSYFAKSAT IYNPIIYVFM NRQFRNCILH LFGKKVDDSS ELSSTSKTEV SSVSSVSPA

Genular Protein ID: 4155584370

Symbol: Q3UEX0_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q3UEX0

Database IDs:

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

Length: 389
Mass: 43796
Checksum: E863FC6DA09E2E13
Sequence:

MAQRLTGEQT LDHYEDSTHA SIFTYTNSNS TKGPFEGPNY HIAPRWVYHL TSTWVILVVV 
ASVFTNGLVL AATMRFKKLR HPLNWILVNL AVADLAETII ASTISVVNQI YGYFVLGHPL 
CVIEGYIVSL CGITGLWSLA IISWERWLVV CKPFGNVRFD AKLATVGIVF SWVWAAIWTA 
PPIFGWSRYW PYGLKTSCGP DVFSGTSYPG VQSYMMVLMV TCCIFPLSII VLCYLQVWLA 
IRAVAKQQKE SESTQKAEKE VTRMVVVMVF AYCLCWGPYT FFACFATAHP GYAFHPLVAS 
LPSYFAKSAT IYNPIIYVFM NRQALVHASF ETASYISLER RLMIALNFQA PPRQKSHLSL 
QCHLHKVCLQ PVPSIKALAM FYLPSHLSL

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Opn1mw

Associated with

Other Information

Mechanisms of spectral tuning in the mouse green cone pigment. PubMed ID: 9238068

The murine cone photoreceptor: a single cone type expresses both S and M opsins with retinal spatial patterning. PubMed ID: 11055434

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Loss of CRB2 in the mouse retina mimics human retinitis pigmentosa due to mutations in the CRB1 gene. PubMed ID: 23001562

Human red and green cone opsins are O-glycosylated at an N-terminal Ser/Thr-rich domain conserved in vertebrates. PubMed ID: 30948514

High-efficiency full-length cDNA cloning. PubMed ID: 10349636

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. PubMed ID: 11042159

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. PubMed ID: 11076861

Functional annotation of a full-length mouse cDNA collection. PubMed ID: 11217851

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. PubMed ID: 12466851

Antisense Transcription in the Mammalian Transcriptome. PubMed ID: 16141073