Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: hippocampal astrocyte (CL0002604)
Fold Change: 2.7633
Cell Significance Index: 38.6400 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 1.0607
Cell Significance Index: 40.1700 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: 1.0539
Cell Significance Index: 64.7800 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 1.0472
Cell Significance Index: 46.3200 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.9534
Cell Significance Index: 191.2500 - Cell Name: cortical interneuron (CL0008031)
Fold Change: 0.8702
Cell Significance Index: 20.8700 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.7892
Cell Significance Index: 17.2800 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.4206
Cell Significance Index: 150.8600 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 0.2776
Cell Significance Index: 4.8000 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.1700
Cell Significance Index: 117.5700 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.0738
Cell Significance Index: 1.8400 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 0.0109
Cell Significance Index: 0.3100 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0104
Cell Significance Index: -19.6100 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0148
Cell Significance Index: -27.3400 - Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
Fold Change: -0.0169
Cell Significance Index: -0.1100 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0178
Cell Significance Index: -27.3400 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0206
Cell Significance Index: -28.0600 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0374
Cell Significance Index: -28.3400 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0405
Cell Significance Index: -25.7400 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0416
Cell Significance Index: -30.8500 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0420
Cell Significance Index: -22.9600 - Cell Name: mature astrocyte (CL0002627)
Fold Change: -0.0432
Cell Significance Index: -0.4800 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0463
Cell Significance Index: -28.9100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0504
Cell Significance Index: -28.4300 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0572
Cell Significance Index: -25.9600 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0678
Cell Significance Index: -19.5200 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0757
Cell Significance Index: -5.0900 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0930
Cell Significance Index: -2.6000 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.1068
Cell Significance Index: -21.2000 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.1076
Cell Significance Index: -4.6800 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.1367
Cell Significance Index: -28.8000 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.1385
Cell Significance Index: -24.9600 - Cell Name: neural cell (CL0002319)
Fold Change: -0.1637
Cell Significance Index: -1.9100 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.1643
Cell Significance Index: -23.8900 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.1671
Cell Significance Index: -22.9500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.1685
Cell Significance Index: -28.7700 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.2118
Cell Significance Index: -26.0500 - Cell Name: mesothelial cell of epicardium (CL0011019)
Fold Change: -0.2162
Cell Significance Index: -1.8700 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.2313
Cell Significance Index: -24.0800 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.2581
Cell Significance Index: -26.3600 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.2693
Cell Significance Index: -30.8500 - Cell Name: slow muscle cell (CL0000189)
Fold Change: -0.2814
Cell Significance Index: -4.2100 - Cell Name: glioblast (CL0000030)
Fold Change: -0.3217
Cell Significance Index: -2.0200 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.3435
Cell Significance Index: -26.3600 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.3787
Cell Significance Index: -21.2500 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.4027
Cell Significance Index: -10.3500 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.4214
Cell Significance Index: -8.4600 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.4223
Cell Significance Index: -22.1700 - Cell Name: neuron (CL0000540)
Fold Change: -0.4241
Cell Significance Index: -4.0200 - Cell Name: astrocyte (CL0000127)
Fold Change: -0.4325
Cell Significance Index: -4.9500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.4357
Cell Significance Index: -11.8600 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.4464
Cell Significance Index: -15.6400 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.4505
Cell Significance Index: -14.7500 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.4735
Cell Significance Index: -10.0500 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.4933
Cell Significance Index: -15.7100 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.5044
Cell Significance Index: -23.7100 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.5083
Cell Significance Index: -8.7100 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.5219
Cell Significance Index: -23.6600 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.5244
Cell Significance Index: -10.3700 - Cell Name: skeletal muscle fibroblast (CL0011027)
Fold Change: -0.5446
Cell Significance Index: -3.6900 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.5790
Cell Significance Index: -12.5100 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.5892
Cell Significance Index: -27.4700 - Cell Name: glutamatergic neuron (CL0000679)
Fold Change: -0.6086
Cell Significance Index: -6.6300 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.6098
Cell Significance Index: -15.2100 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.6177
Cell Significance Index: -12.9300 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.6257
Cell Significance Index: -8.9600 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.6443
Cell Significance Index: -40.6100 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.6717
Cell Significance Index: -14.0200 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.7781
Cell Significance Index: -27.0400 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.7812
Cell Significance Index: -27.4500 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.7848
Cell Significance Index: -19.0100 - Cell Name: fast muscle cell (CL0000190)
Fold Change: -0.8025
Cell Significance Index: -10.5100 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: -0.8115
Cell Significance Index: -5.9000 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.8178
Cell Significance Index: -30.0200 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: -0.8241
Cell Significance Index: -16.2200 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.8359
Cell Significance Index: -14.0800 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.8397
Cell Significance Index: -24.0700 - Cell Name: epidermal cell (CL0000362)
Fold Change: -0.8428
Cell Significance Index: -1.9000 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: -0.8672
Cell Significance Index: -8.5800 - Cell Name: radial glial cell (CL0000681)
Fold Change: -0.8729
Cell Significance Index: -5.1800 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.8875
Cell Significance Index: -13.1000 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.8906
Cell Significance Index: -23.7800 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.9039
Cell Significance Index: -28.5900 - Cell Name: stromal cell of endometrium (CL0002255)
Fold Change: -0.9167
Cell Significance Index: -13.0400 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.9408
Cell Significance Index: -27.7100 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.9465
Cell Significance Index: -27.2700 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.9808
Cell Significance Index: -24.9900 - Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
Fold Change: -0.9813
Cell Significance Index: -13.0800 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: -0.9819
Cell Significance Index: -19.9800 - Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
Fold Change: -1.0115
Cell Significance Index: -20.1700 - Cell Name: keratinocyte (CL0000312)
Fold Change: -1.0206
Cell Significance Index: -25.4900 - Cell Name: granulosa cell (CL0000501)
Fold Change: -1.0462
Cell Significance Index: -27.5100 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -1.0476
Cell Significance Index: -28.0700 - Cell Name: memory B cell (CL0000787)
Fold Change: -1.0762
Cell Significance Index: -11.4500 - Cell Name: fibroblast of connective tissue of nonglandular part of prostate (CL1000304)
Fold Change: -1.0911
Cell Significance Index: -11.9100 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -1.1025
Cell Significance Index: -27.5600 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: -1.1467
Cell Significance Index: -10.9100 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: -1.1487
Cell Significance Index: -22.4600 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -1.1511
Cell Significance Index: -24.6100 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: -1.1927
Cell Significance Index: -15.0500
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 932628623
Symbol: NCAN_HUMAN
Name: Neurocan core protein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9795216
Title: Characterization of the human neurocan gene, CSPG3.
PubMed ID: 9795216
PubMed ID: 15057824
Title: The DNA sequence and biology of human chromosome 19.
PubMed ID: 15057824
DOI: 10.1038/nature02399
PubMed ID: 23234360
Title: LC-MS/MS characterization of O-glycosylation sites and glycan structures of human cerebrospinal fluid glycoproteins.
PubMed ID: 23234360
DOI: 10.1021/pr300963h
PubMed ID: 25326458
Title: Identification of chondroitin sulfate linkage region glycopeptides reveals prohormones as a novel class of proteoglycans.
PubMed ID: 25326458
Sequence Information:
- Length: 1321
- Mass: 143093
- Checksum: 22E21FFA24CE9FB2
- Sequence:
MGAPFVWALG LLMLQMLLFV AGEQGTQDIT DASERGLHMQ KLGSGSVQAA LAELVALPCL FTLQPRPSAA RDAPRIKWTK VRTASGQRQD LPILVAKDNV VRVAKSWQGR VSLPSYPRRR ANATLLLGPL RASDSGLYRC QVVRGIEDEQ DLVPLEVTGV VFHYRSARDR YALTFAEAQE ACRLSSAIIA APRHLQAAFE DGFDNCDAGW LSDRTVRYPI TQSRPGCYGD RSSLPGVRSY GRRNPQELYD VYCFARELGG EVFYVGPARR LTLAGARAQC RRQGAALASV GQLHLAWHEG LDQCDPGWLA DGSVRYPIQT PRRRCGGPAP GVRTVYRFAN RTGFPSPAER FDAYCFRAHH PTSQHGDLET PSSGDEGEIL SAEGPPVREL EPTLEEEEVV TPDFQEPLVS SGEEETLILE EKQESQQTLS PTPGDPMLAS WPTGEVWLST VAPSPSDMGA GTAASSHTEV APTDPMPRRR GRFKGLNGRY FQQQEPEPGL QGGMEASAQP PTSEAAVNQM EPPLAMAVTE MLGSGQSRSP WADLTNEVDM PGAGSAGGKS SPEPWLWPPT MVPPSISGHS RAPVLELEKA EGPSARPATP DLFWSPLEAT VSAPSPAPWE AFPVATSPDL PMMAMLRGPK EWMLPHPTPI STEANRVEAH GEATATAPPS PAAETKVYSL PLSLTPTGQG GEAMPTTPES PRADFRETGE TSPAQVNKAE HSSSSPWPSV NRNVAVGFVP TETATEPTGL RGIPGSESGV FDTAESPTSG LQATVDEVQD PWPSVYSKGL DASSPSAPLG SPGVFLVPKV TPNLEPWVAT DEGPTVNPMD STVTPAPSDA SGIWEPGSQV FEEAESTTLS PQVALDTSIV TPLTTLEQGD KVGVPAMSTL GSSSSQPHPE PEDQVETQGT SGASVPPHQS SPLGKPAVPP GTPTAASVGE SASVSSGEPT VPWDPSSTLL PVTLGIEDFE LEVLAGSPGV ESFWEEVASG EEPALPGTPM NAGAEEVHSD PCENNPCLHG GTCNANGTMY GCSCDQGFAG ENCEIDIDDC LCSPCENGGT CIDEVNGFVC LCLPSYGGSF CEKDTEGCDR GWHKFQGHCY RYFAHRRAWE DAEKDCRRRS GHLTSVHSPE EHSFINSFGH ENTWIGLNDR IVERDFQWTD NTGLQFENWR ENQPDNFFAG GEDCVVMVAH ESGRWNDVPC NYNLPYVCKK GTVLCGPPPA VENASLIGAR KAKYNVHATV RYQCNEGFAQ HHVATIRCRS NGKWDRPQIV CTKPRRSHRM RRHHHHHQHH HQHHHHKSRK ERRKHKKHPT EDWEKDEGNF C
Genular Protein ID: 1210393860
Symbol: Q4LE67_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 1335
- Mass: 144643
- Checksum: 4560E9CE87A699A7
- Sequence:
RPPRDASELG ARSRMGAPFV WALGLLMLQM LLFVAGEQGT QDITDASERG LHMQKLGSGS VQAALAELVA LPCLFTLQPR PSAARDAPRI KWTKVRTASG QRQDLPILVA KDNVVRVAKS WQGRVSLPSY PRRRANATLL LGPLRASDSG LYRCQVVRGI EDEQDLVPLE VTGVVFHYRS ARDRYALTFA EAQEACRLSS AIIAAPRHLQ AAFEDGFDNC DAGWLSDRTV RYPITQSRPG CYGDRSSLPG VRSYGRRNPQ ELYDVYCFAR ELGGEVFYVG PARRLTLAGA RAQCRRQGAA LASVGQLHLA WHEGLDQCDP GWLADGSVRY PIQTPRRRCG GPAPGVRTVY RFANRTGFPS PAERFDAYCF RAHHPTSQHG DLETPSSGDE GEILSAEGPP VRELEPTLEE EEVVTPDFQE PLVSSGEEET LILEEKQESQ QTLSPTPGDP MLASWPTGEV WLSTVAPSPS DMGAGTAASS HTEVAPTDPM PRRRGRFKGL NGRYFQQQEP EPGLQGGMEA SAQPPTSEAA VNQMEPPLAM AVTEMLGSGQ SRSPWADLTN EVDMPGAGSA GGKSSPEPWL WPPTMVPPSI SGHSRAPVLE LEKAEGPSAR PATPDLFWSP LEATVSAPSP APWEAFPVAT SPDLPMMAML RGPKEWMLPH PTPISTEANR VEAHGEATAT APPSPAAETK VYSLPLSLTP TGQGGEAMPT TPESPRADFR ETGETSPAQV NKAEHSSSSP WPSVNRNVAV GFVPTETATE PTGLRGIPGS ESGVFDTAES PTSGLQATVD EVQDPWPSVY SKGLDASSPS APLGSPGVFL VPKVTPNLEP WVATDEGPTV NPMDSTVTPA PSDASGIWEP GSQVFEEAES TTLSPQVALD TSIVTPLTTL EQGDKVGVPA MSTLGSSSSQ PHPEPEDQVE TQGTSGASVP PHQSSPLGKP AVPPGTPTAA SVGESASVSS GEPTVPWDPS STLLPVTLGI EDFELEVLAG SPGVESFWEE VASGEEPALP GTPMNAGAEE VHSDPCENNP CLHGGTCNAN GTMYGCSCDQ GFAGENCEID IDDCLCSPCE NGGTCIDEVN GFVCLCLPSY GGSFCEKDTE GCDRGWHKFQ GHCYRYFAHR RAWEDAEKDC RRRSGHLTSV HSPEEHSFIN SFGHENTWIG LNDRIVERDF QWTDNTGLQF ENWRENQPDN FFAGGEDCVV MVAHESGRWN DVPCNYNLPY VCKKGTVLCG PPPAVENASL IGARKAKYNV HATVRYQCNE GFAQHHVATI RCRSNGKWDR PQIVCTKPRR SHRMRRHHHH HQHHHQHHHH KSRKERRKHK KHPTEDWEKD EGNFC
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.