Details for: CX3CR1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 41.8528
Cell Significance Index: -6.5100 - Cell Name: peripheral blood mononuclear cell (CL2000001)
Fold Change: 14.3472
Cell Significance Index: -7.3800 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 5.2557
Cell Significance Index: -6.4800 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 3.9024
Cell Significance Index: 97.5500 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: 3.2304
Cell Significance Index: 49.9800 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 3.2281
Cell Significance Index: 197.9100 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 2.4074
Cell Significance Index: 52.1600 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 1.8430
Cell Significance Index: 59.0300 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 1.7972
Cell Significance Index: -5.5200 - Cell Name: CD8-positive, alpha-beta cytokine secreting effector T cell (CL0000908)
Fold Change: 1.4925
Cell Significance Index: 15.8800 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: 1.2336
Cell Significance Index: 18.5900 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 1.2111
Cell Significance Index: 54.9000 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.9428
Cell Significance Index: 179.4300 - Cell Name: central nervous system macrophage (CL0000878)
Fold Change: 0.7231
Cell Significance Index: 8.6900 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.5751
Cell Significance Index: 56.9000 - Cell Name: activated CD8-positive, alpha-beta T cell, human (CL0001049)
Fold Change: 0.5599
Cell Significance Index: 4.3200 - Cell Name: mature microglial cell (CL0002629)
Fold Change: 0.5411
Cell Significance Index: 5.9100 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.5089
Cell Significance Index: 459.5200 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.4562
Cell Significance Index: 9.7200 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.3428
Cell Significance Index: 37.2900 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.3170
Cell Significance Index: 51.5600 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.2638
Cell Significance Index: 15.8400 - Cell Name: myeloid leukocyte (CL0000766)
Fold Change: 0.2043
Cell Significance Index: 1.6600 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.1317
Cell Significance Index: 9.1100 - Cell Name: activated type II NK T cell (CL0000931)
Fold Change: 0.0312
Cell Significance Index: 0.0800 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0031
Cell Significance Index: -5.8500 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0054
Cell Significance Index: -10.0400 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.0060
Cell Significance Index: -0.2100 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.0062
Cell Significance Index: -0.1800 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0065
Cell Significance Index: -10.0400 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0075
Cell Significance Index: -10.2600 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0077
Cell Significance Index: -5.8400 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0088
Cell Significance Index: -6.5000 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: -0.0099
Cell Significance Index: -4.3900 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0108
Cell Significance Index: -5.8900 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0109
Cell Significance Index: -7.9600 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0111
Cell Significance Index: -6.2500 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0120
Cell Significance Index: -7.6400 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0143
Cell Significance Index: -5.1200 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0176
Cell Significance Index: -8.0000 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0198
Cell Significance Index: -5.7000 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0245
Cell Significance Index: -2.5000 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: -0.0247
Cell Significance Index: -4.9500 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0276
Cell Significance Index: -5.4700 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0311
Cell Significance Index: -6.5600 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: -0.0319
Cell Significance Index: -0.5900 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0409
Cell Significance Index: -6.9900 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0410
Cell Significance Index: -7.4000 - Cell Name: hematopoietic cell (CL0000988)
Fold Change: -0.0417
Cell Significance Index: -0.6100 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0453
Cell Significance Index: -6.2200 - Cell Name: mononuclear cell (CL0000842)
Fold Change: -0.0481
Cell Significance Index: -0.2000 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0508
Cell Significance Index: -6.5600 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0515
Cell Significance Index: -7.4900 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.0578
Cell Significance Index: -4.0900 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0578
Cell Significance Index: -7.4100 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0586
Cell Significance Index: -6.9100 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0600
Cell Significance Index: -2.8200 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.0603
Cell Significance Index: -1.5500 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0608
Cell Significance Index: -7.4800 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.0619
Cell Significance Index: -1.2900 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0625
Cell Significance Index: -6.5100 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.0627
Cell Significance Index: -2.5700 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0638
Cell Significance Index: -7.3100 - Cell Name: microglial cell (CL0000129)
Fold Change: -0.0655
Cell Significance Index: -0.7700 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.0685
Cell Significance Index: -2.9800 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0719
Cell Significance Index: -2.0100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0879
Cell Significance Index: -6.5500 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0898
Cell Significance Index: -5.5200 - Cell Name: leukocyte (CL0000738)
Fold Change: -0.0916
Cell Significance Index: -1.5600 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0933
Cell Significance Index: -7.1600 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.0953
Cell Significance Index: -2.5500 - Cell Name: CD16-positive, CD56-dim natural killer cell, human (CL0000939)
Fold Change: -0.0988
Cell Significance Index: -0.8800 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0998
Cell Significance Index: -6.7100 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.1105
Cell Significance Index: -7.1300 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.1114
Cell Significance Index: -5.6300 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: -0.1148
Cell Significance Index: -2.7800 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1410
Cell Significance Index: -7.9100 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.1473
Cell Significance Index: -7.6500 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: -0.1481
Cell Significance Index: -2.1500 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1625
Cell Significance Index: -8.5300 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.1736
Cell Significance Index: -6.0800 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: -0.1785
Cell Significance Index: -3.4900 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.1795
Cell Significance Index: -2.5700 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.1811
Cell Significance Index: -8.0100 - Cell Name: myeloid cell (CL0000763)
Fold Change: -0.1874
Cell Significance Index: -2.4900 - Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
Fold Change: -0.1951
Cell Significance Index: -5.7300 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.2004
Cell Significance Index: -6.5600 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.2047
Cell Significance Index: -6.5200 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.2150
Cell Significance Index: -8.1400 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.2185
Cell Significance Index: -8.0200 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.2198
Cell Significance Index: -10.2500 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.2316
Cell Significance Index: -6.6400 - Cell Name: mononuclear phagocyte (CL0000113)
Fold Change: -0.2390
Cell Significance Index: -2.0200 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.2412
Cell Significance Index: -6.4400 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.2460
Cell Significance Index: -7.0200 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.2466
Cell Significance Index: -6.4900 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.2489
Cell Significance Index: -6.6700 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.2490
Cell Significance Index: -6.3600 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.2530
Cell Significance Index: -6.3100 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: -0.2619
Cell Significance Index: -6.5300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 402047493
Symbol: CX3C1_HUMAN
Name: G-protein coupled receptor 13
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7590284
Title: The orphan G-protein-coupled receptor-encoding gene V28 is closely related to genes for chemokine receptors and is expressed in lymphoid and neural tissues.
PubMed ID: 7590284
PubMed ID: 7646814
Title: Cloning, chromosomal localization, and RNA expression of a human beta chemokine receptor-like gene.
PubMed ID: 7646814
PubMed ID: 12551893
Title: Genomic organization and evolution of the CX3CR1/CCR8 chemokine receptor locus.
PubMed ID: 12551893
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16641997
Title: The DNA sequence, annotation and analysis of human chromosome 3.
PubMed ID: 16641997
DOI: 10.1038/nature04728
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9390561
Title: Identification and molecular characterization of fractalkine receptor CX3CR1, which mediates both leukocyte migration and adhesion.
PubMed ID: 9390561
PubMed ID: 9782118
Title: Fractalkine and CX3CR1 mediate a novel mechanism of leukocyte capture, firm adhesion, and activation under physiologic flow.
PubMed ID: 9782118
PubMed ID: 11477410
Title: CX3C chemokine mimicry by respiratory syncytial virus G glycoprotein.
PubMed ID: 11477410
DOI: 10.1038/90675
PubMed ID: 12055230
Title: Dual functions of fractalkine/CX3C ligand 1 in trafficking of perforin+/granzyme B+ cytotoxic effector lymphocytes that are defined by CX3CR1 expression.
PubMed ID: 12055230
PubMed ID: 14607932
Title: Two novel fully functional isoforms of CX3CR1 are potent HIV coreceptors.
PubMed ID: 14607932
PubMed ID: 9726990
Title: Identification of CX3CR1. A chemotactic receptor for the human CX3C chemokine fractalkine and a fusion coreceptor for HIV-1.
PubMed ID: 9726990
PubMed ID: 14581400
Title: Smooth muscle cells in human atherosclerotic plaques express the fractalkine receptor CX3CR1 and undergo chemotaxis to the CX3C chemokine fractalkine (CX3CL1).
PubMed ID: 14581400
PubMed ID: 18971423
Title: CX3CR1 is required for monocyte homeostasis and atherogenesis by promoting cell survival.
PubMed ID: 18971423
PubMed ID: 20974991
Title: Eotaxin-3/CC chemokine ligand 26 is a functional ligand for CX3CR1.
PubMed ID: 20974991
PubMed ID: 23125415
Title: Integrins alphavbeta3 and alpha4beta1 act as coreceptors for fractalkine, and the integrin-binding defective mutant of fractalkine is an antagonist of CX3CR1.
PubMed ID: 23125415
PubMed ID: 28791023
Title: TGF-beta1 downregulates the expression of CX3CR1 by inducing miR-27a-5p in primary human NK cells.
PubMed ID: 28791023
PubMed ID: 29326275
Title: CX3CR1+ mononuclear phagocytes control immunity to intestinal fungi.
PubMed ID: 29326275
PubMed ID: 10731151
Title: Rapid progression to AIDS in HIV+ individuals with a structural variant of the chemokine receptor CX3CR1.
PubMed ID: 10731151
PubMed ID: 11264153
Title: Polymorphism in the fractalkine receptor CX3CR1 as a genetic risk factor for coronary artery disease.
PubMed ID: 11264153
PubMed ID: 15208270
Title: The involvement of sequence variation and expression of CX3CR1 in the pathogenesis of age-related macular degeneration.
PubMed ID: 15208270
PubMed ID: 17909628
Title: CX3CR1-dependent subretinal microglia cell accumulation is associated with cardinal features of age-related macular degeneration.
PubMed ID: 17909628
DOI: 10.1172/jci31692
Sequence Information:
- Length: 355
- Mass: 40396
- Checksum: C59DC5F4C4312F22
- Sequence:
MDQFPESVTE NFEYDDLAEA CYIGDIVVFG TVFLSIFYSV IFAIGLVGNL LVVFALTNSK KPKSVTDIYL LNLALSDLLF VATLPFWTHY LINEKGLHNA MCKFTTAFFF IGFFGSIFFI TVISIDRYLA IVLAANSMNN RTVQHGVTIS LGVWAAAILV AAPQFMFTKQ KENECLGDYP EVLQEIWPVL RNVETNFLGF LLPLLIMSYC YFRIIQTLFS CKNHKKAKAI KLILLVVIVF FLFWTPYNVM IFLETLKLYD FFPSCDMRKD LRLALSVTET VAFSHCCLNP LIYAFAGEKF RRYLYHLYGK CLAVLCGRSV HVDFSSSESQ RSRHGSVLSS NFTYHTSDGD ALLLL
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.