Genular: Defining Cellular Identity and Function

Details for: Hmg20b

Gene ID: 15353

Symbol: Hmg20b

Ensembl ID: ENSMUSG00000020232

Description: high mobility group 20B

Associated with

Chromatin modifying enzymes
(R-MMU-3247509)
Factors involved in megakaryocyte development and platelet production
(R-MMU-983231)
Hdacs deacetylate histones
(R-MMU-3214815)
Hemostasis
(R-MMU-109582)
Brca2-braf35 complex
(GO:0002111)
Cell cycle
(GO:0007049)
Chromatin organization
(GO:0006325)
Chromatin remodeling
(GO:0006338)
Chromosome
(GO:0005694)
Condensed nuclear chromosome
(GO:0000794)
Dna binding
(GO:0003677)
Four-way junction dna binding
(GO:0000400)
Negative regulation of protein sumoylation
(GO:0033234)
Nuclear body
(GO:0016604)
Nucleoplasm
(GO:0005654)
Nucleus
(GO:0005634)
Positive regulation of neuron differentiation
(GO:0045666)
Protein binding
(GO:0005515)
Protein sumoylation
(GO:0016925)
Regulation of dna-templated transcription
(GO:0006355)
Regulation of gene expression
(GO:0010468)
Skeletal muscle cell differentiation
(GO:0035914)

Other Information

Proteins

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Q3U1Z7_MOUSE

Genular Protein ID: 417250836

Symbol: HM20B_MOUSE

Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related

UniProtKB Accession Codes:

Q9Z104 Q9NSF7 Q9NSF8

Database IDs:

Citations:

PubMed ID: 10486208

Title: Cloning, chromosomal location, and expression analysis of murine Smarce1-related, a new member of the high-mobility 365 group gene family.

PubMed ID: 10486208

DOI: 10.1006/geno.1999.5913

PubMed ID: 10773667

Title: HMG20A and HMG20B map to human chromosomes 15q24 and 19p13.3 and constitute a distinct class of HMG-box genes with ubiquitous expression.

PubMed ID: 10773667

DOI: 10.1159/000015486

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 20530487

Title: The interaction with HMG20a/b proteins suggests a potential role for beta-dystrobrevin in neuronal differentiation.

PubMed ID: 20530487

DOI: 10.1074/jbc.m109.090654

Sequence Information:

Length: 317
Mass: 35870
Checksum: 6C4D45D2EB1D403B
Sequence:

MSHGPRQPGA ATAPAGGKTP GQHGAFVVAV KQERSEGSRA GEKGPQEEEP VKKRGWPKGK 
KRKKILPNGP KAPVTGYVRF LNERREQIRT RHPDLPFPEI TKMLGAEWSK LQPAEKQRYL 
DEAEKEKQQY LKELWAYQQS EAYKVCTEKI QENKIKKEDS SSGLMNTLLN GHKGVDCDGF 
STFDVPIFTE EFLDQNKARE AELRRLRKMN VAFEEQNAVL QRHTQSMSSA RERLEQELAL 
EERRTLALQQ QLQAVRQALT ASFASLPVPG TGETPTLGTL DFYMARLHGA IERDPAQHER 
LIARVKEILA RVASEHL

Genular Protein ID: 3126007973

Symbol: Q3U1Z7_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q3U1Z7

Database IDs:

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

Length: 150
Mass: 17003
Checksum: 000C25C96F83AA8E
Sequence:

MSHGPRQPGA ATAPAGGKTP GQHGAFVVAV KQERSEGSRA GEKGPQEEEP VKKRGWPKGK 
KRKKILPNGP KAPVTGYVRF LNERREQIRT RHPDLPFPEI TKMLGAEWSK LQPAEKQRYL 
DEAEKEKQQY LKELWAYQQS EAYKVCTEKI

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Hmg20b

Associated with

Other Information

Cloning, chromosomal location, and expression analysis of murine Smarce1-related, a new member of the high-mobility 365 group gene family. PubMed ID: 10486208

HMG20A and HMG20B map to human chromosomes 15q24 and 19p13.3 and constitute a distinct class of HMG-box genes with ubiquitous expression. PubMed ID: 10773667

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

The interaction with HMG20a/b proteins suggests a potential role for beta-dystrobrevin in neuronal differentiation. PubMed ID: 20530487

High-efficiency full-length cDNA cloning. PubMed ID: 10349636

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. PubMed ID: 11042159

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. PubMed ID: 11076861

Functional annotation of a full-length mouse cDNA collection. PubMed ID: 11217851

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. PubMed ID: 12466851

Antisense Transcription in the Mammalian Transcriptome. PubMed ID: 16141073