Details for: Hoxd8

Gene ID: 15437

Symbol: Hoxd8

Ensembl ID: ENSMUSG00000027102

Description: homeobox D8

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription activator activity, rna polymerase ii-specific
    (GO:0001228)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Multicellular organism development
    (GO:0007275)
  • Negative regulation of transcription by rna polymerase ii
    (GO:0000122)
  • Nucleus
    (GO:0005634)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)
  • Sequence-specific double-stranded dna binding
    (GO:1990837)
  • Skeletal system morphogenesis
    (GO:0048705)

Other Information

Genular Protein ID: 2494318970

Symbol: HXD8_MOUSE

Name: Homeobox protein Hox-D8

UniProtKB Accession Codes:

P23463 A2ASN2

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CCDS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 3 Ensembl 1 ExpressionAtlas 1 GO 10 Gene3D 1 GeneTree 1 Genevisible 1 HOGENOM 1 InParanoid 1 InterPro 5 KEGG 1 MGI 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIR 2 PRINTS 1 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 1 RNAct 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 1982431

Title: Primary structure and embryonic expression pattern of the mouse Hox-4.3 homeobox gene.

PubMed ID: 1982431

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 1675873

Title: Sequence analysis of the homeobox-containing exon of the murine Hox-4.3 homeogene.

PubMed ID: 1675873

DOI: 10.1016/0167-4781(91)90020-m

PubMed ID: 1683707

Title: Identification of 10 murine homeobox genes.

PubMed ID: 1683707

DOI: 10.1073/pnas.88.23.10706

PubMed ID: 1348361

Title: Hox-1.11 and Hox-4.9 homeobox genes.

PubMed ID: 1348361

DOI: 10.1073/pnas.89.7.2883

Sequence Information:

  • Length: 289
  • Mass: 31363
  • Checksum: E9996BB134A3A22E
  • Sequence:
    • MSSYFVNPLY SKYKAAAAAA AAAAAAAAGE AINPTYYDCH FAPEVSGRHA AALQLYGNSA 
AGFPHAHPHP HPHPSPPPGC GGGGGPGPGQ DYFHAGAGSP TAAYQAAPPP PHPPPPPPPP 
PCGGIACHGE PAKFYGYDNL QRQPIFTTQQ EAELVQYPDC KSSSGNIGED PDHLNQSSSP 
SQMFPWMRPQ AAPGRRRGRQ TYSRFQTLEL EKEFLFNPYL TRKRRIEVSH TLALTERQVK 
IWFQNRRMKW KKENNKDKFP ASRPEAKDGD PKKEVSGLEE DGAEGCPTN

Genular Protein ID: 1465859257

Symbol: F6W963_MOUSE

Name: N/A

UniProtKB Accession Codes:

F6W963

Database IDs:

AGR 1 ARBA 9 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 Ensembl 2 ExpressionAtlas 1 GO 5 Gene3D 1 GeneTree 1 HOGENOM 1 InterPro 5 MGI 2 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 4 PROSITE-ProRule 1 Pfam 1 Proteomes 2 ProteomicsDB 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

Sequence Information:

  • Length: 107
  • Mass: 12769
  • Checksum: 0CAF0ABA5F437E33
  • Sequence:
    • MFPWMRPQAA PGRRRGRQTY SRFQTLELEK EFLFNPYLTR KRRIEVSHTL ALTERQVKIW 
FQNRRMKWKK ENNKDKFPAS RPEAKDGDPK KEVSGLEEDG AEGCPTN

Genular Protein ID: 496394444

Symbol: A2ASN1_MOUSE

Name: N/A

UniProtKB Accession Codes:

A2ASN1

Database IDs:

AGR 1 ARBA 9 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 Ensembl 2 ExpressionAtlas 1 GO 5 Gene3D 1 GeneTree 1 InterPro 5 MGI 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 4 PROSITE-ProRule 1 Pfam 1 Proteomes 2 ProteomicsDB 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

Sequence Information:

  • Length: 288
  • Mass: 31292
  • Checksum: 437F478C96AF9748
  • Sequence:
    • MSSYFVNPLY SKYKAAAAAA AAAAAAAAGE AINPTYYDCH FAPEVSGRHA AALQLYGNSA 
AGFPHAHPHP HPHPSPPPGC GGGGGPGPGQ DYFHAGAGSP TAAYQAAPPP PHPPPPPPPP 
PCGGIACHGE PAKFYGYDNL QRQPIFTTQQ EAELVQYPDC KSSSGNIGED PDHLNQSSSP 
SQMFPWMRPQ APGRRRGRQT YSRFQTLELE KEFLFNPYLT RKRRIEVSHT LALTERQVKI 
WFQNRRMKWK KENNKDKFPA SRPEAKDGDP KKEVSGLEED GAEGCPTN

Genular Protein ID: 827616867

Symbol: Q9CUQ8_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q9CUQ8

Database IDs:

AGR 1 ARBA 8 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 GO 5 Gene3D 1 InterPro 3 MGI 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 3 PROSITE-ProRule 1 Pfam 1 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SUPFAM 1

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

  • Length: 163
  • Mass: 18199
  • Checksum: E956CF5E76D1E8D1
  • Sequence:
    • LERGGGPGPG QDYFHAGAGS PTAAYQAAPP PPHPPPPPPP PPCGGIACHG EPAKFYGYDN 
LQRQPIFTHQ QEAELVQYPD CESSSGNIGE DPDHLNQSSS PSQMFPWMRA QAPGRRRGRQ 
TYSRFQTLEL GKEFLFYPYL TRKRRIEVSH TLALTERQVK LWF

Genular Protein ID: 512900682

Symbol: Q9CUH8_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q9CUH8

Database IDs:

AGR 1 ARBA 9 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 GO 5 Gene3D 1 InterPro 5 KEGG 1 MGI 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 4 PROSITE-ProRule 1 Pfam 1 RefSeq 2 RuleBase 1 SAM 1 SMART 1 SUPFAM 1

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

  • Length: 218
  • Mass: 24013
  • Checksum: B03E167592E6FFD5
  • Sequence:
    • PHPVPPPGCG GGGGPGPGQD YFHAGAGSPT AAYQAAPPPP HPPPPPPPPP CGGIACHGEP 
AKFYGPDNLQ RQPIFTTQQE AELVQYPDCK SSSGNIGEDP DHLNQSSSPS QMFPWMRPQA 
APGRRRGRQT YSRFQTLELE KEFLFNPYLT RKRRIEVSHT LALTERQVKI WFQNRRMKWK 
KENNKDKFPA SRPEAKDGDP KKEVSGLEED GAEGCPTN

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.