Details for: Hoxd9

Gene ID: 15438

Symbol: Hoxd9

Ensembl ID: ENSMUSG00000043342

Description: homeobox D9

Associated with

  • Adult locomotory behavior
    (GO:0008344)
  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna-binding transcription repressor activity, rna polymerase ii-specific
    (GO:0001227)
  • Dna-templated transcription
    (GO:0006351)
  • Dna binding
    (GO:0003677)
  • Embryonic forelimb morphogenesis
    (GO:0035115)
  • Embryonic skeletal system development
    (GO:0048706)
  • Embryonic skeletal system morphogenesis
    (GO:0048704)
  • Forelimb morphogenesis
    (GO:0035136)
  • Hindlimb morphogenesis
    (GO:0035137)
  • Mammary gland development
    (GO:0030879)
  • Multicellular organism development
    (GO:0007275)
  • Negative regulation of transcription by rna polymerase ii
    (GO:0000122)
  • Nucleolus
    (GO:0005730)
  • Nucleoplasm
    (GO:0005654)
  • Nucleus
    (GO:0005634)
  • Peripheral nervous system neuron development
    (GO:0048935)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Proximal/distal pattern formation
    (GO:0009954)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of gene expression
    (GO:0010468)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)
  • Sequence-specific double-stranded dna binding
    (GO:1990837)
  • Single fertilization
    (GO:0007338)
  • Skeletal muscle tissue development
    (GO:0007519)

Other Information

Genular Protein ID: 2582827521

Symbol: HXD9_MOUSE

Name: Homeobox protein Hox-D9

UniProtKB Accession Codes:

P28357 A2ASM9 Q3UMQ3 Q3UYS2

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 BMRB 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CCDS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 6 Ensembl 1 GO 26 Gene3D 1 GeneTree 1 Genevisible 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 5 KEGG 1 MGI 1 MaxQB 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 1 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 1 Pumba 1 RNAct 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 1348690

Title: Comparison of mouse and human HOX-4 complexes defines conserved sequences involved in the regulation of Hox-4.4.

PubMed ID: 1348690

DOI: 10.1002/j.1460-2075.1992.tb05190.x

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 2569970

Title: Two gene members of the murine HOX-5 complex show regional and cell-type specific expression in developing limbs and gonads.

PubMed ID: 2569970

DOI: 10.1002/j.1460-2075.1989.tb03535.x

PubMed ID: 2569969

Title: The structural and functional organization of the murine HOX gene family resembles that of Drosophila homeotic genes.

PubMed ID: 2569969

DOI: 10.1002/j.1460-2075.1989.tb03534.x

Sequence Information:

  • Length: 339
  • Mass: 34992
  • Checksum: 370DC47C6929F7E1
  • Sequence:
    • MSSSGTLSNY YVDSLIGHEG DEVFAARFGP PGPGTQGRPA GVADGPAAAT AEFASCSFAP 
KSSVFSASWS AVAAQPPAAA TMSGLYHPYV SPPPLAAAEP GRYVRSWMEP LPGFPGGAGG 
GGGSGGGGGG GPGPVPSPGG PANGRHYGIK PETGAAPAPA AASTSSSSST SSSSSSKRTE 
CSAARESQGS GGPEFPCNSF LRDKAAAATG NGPGVGIGTG PGAVGSSEPS ACSDHPSPGC 
SLKEEEKQPP QPPQQQLDPN NPAANWIHAR STRKKRCPYT KYQTLELEKE FLFNMYLTRD 
RRYEVARILN LTERQVKIWF QNRRMKMKKM SKEKCPKGD

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.