Details for: AARS1
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 1.51
Marker Score: 15,574 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 1.5
Marker Score: 1,336 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.44
Marker Score: 88,347 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 1.42
Marker Score: 2,879 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 1.39
Marker Score: 13,066 - Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.37
Marker Score: 5,314 - Cell Name: IgG plasmablast (CL0000982)
Fold Change: 1.37
Marker Score: 378 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 1.37
Marker Score: 20,491 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: 1.37
Marker Score: 18,219 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 1.33
Marker Score: 49,228 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 1.31
Marker Score: 5,158 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 1.31
Marker Score: 2,018 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 1.28
Marker Score: 5,287 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 1.27
Marker Score: 10,928 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 1.26
Marker Score: 11,989 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 1.23
Marker Score: 46,882 - Cell Name: plasmablast (CL0000980)
Fold Change: 1.23
Marker Score: 1,632 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: 1.21
Marker Score: 24,056 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 1.2
Marker Score: 9,175 - Cell Name: IgA plasmablast (CL0000984)
Fold Change: 1.17
Marker Score: 307 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: 1.15
Marker Score: 5,305 - Cell Name: myoepithelial cell of mammary gland (CL0002324)
Fold Change: 1.13
Marker Score: 5,564 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 1.11
Marker Score: 2,335 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: 1.1
Marker Score: 1,369 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 1.09
Marker Score: 530 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 1.06
Marker Score: 973 - Cell Name: oogonial cell (CL0000024)
Fold Change: 1.04
Marker Score: 1,500 - Cell Name: OFF retinal ganglion cell (CL4023033)
Fold Change: 1.03
Marker Score: 430 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71,707 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 47,931 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.99
Marker Score: 1,199 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30,392 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 0.97
Marker Score: 1,213 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.94
Marker Score: 2,399 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 0.94
Marker Score: 2,146 - Cell Name: ovarian surface epithelial cell (CL2000064)
Fold Change: 0.94
Marker Score: 2,549 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 0.93
Marker Score: 19,912 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.93
Marker Score: 480 - Cell Name: glycinergic amacrine cell (CL4030028)
Fold Change: 0.93
Marker Score: 873 - Cell Name: mammary gland epithelial cell (CL0002327)
Fold Change: 0.92
Marker Score: 328 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.92
Marker Score: 435 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.92
Marker Score: 538 - Cell Name: ciliated cell (CL0000064)
Fold Change: 0.9
Marker Score: 3,111 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.9
Marker Score: 2,704 - Cell Name: neuron (CL0000540)
Fold Change: 0.9
Marker Score: 3,663 - Cell Name: Unknown (CL0002371)
Fold Change: 0.89
Marker Score: 948 - Cell Name: malignant cell (CL0001064)
Fold Change: 0.89
Marker Score: 11,963 - Cell Name: pneumocyte (CL0000322)
Fold Change: 0.88
Marker Score: 1,418 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
Fold Change: 0.88
Marker Score: 1,563 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5,293 - Cell Name: lens fiber cell (CL0011004)
Fold Change: 0.87
Marker Score: 276 - Cell Name: Leydig cell (CL0000178)
Fold Change: 0.86
Marker Score: 927 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.86
Marker Score: 309 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.85
Marker Score: 4,854 - Cell Name: male germ cell (CL0000015)
Fold Change: 0.84
Marker Score: 242 - Cell Name: nasal mucosa goblet cell (CL0002480)
Fold Change: 0.83
Marker Score: 557 - Cell Name: hematopoietic cell (CL0000988)
Fold Change: 0.83
Marker Score: 553 - Cell Name: large pre-B-II cell (CL0000957)
Fold Change: 0.82
Marker Score: 2,230 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.81
Marker Score: 1,312 - Cell Name: peptic cell (CL0000155)
Fold Change: 0.81
Marker Score: 338 - Cell Name: ON retinal ganglion cell (CL4023032)
Fold Change: 0.81
Marker Score: 220 - Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
Fold Change: 0.8
Marker Score: 2,136 - Cell Name: fibroblast of breast (CL4006000)
Fold Change: 0.79
Marker Score: 448 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.78
Marker Score: 314 - Cell Name: myeloid leukocyte (CL0000766)
Fold Change: 0.78
Marker Score: 944 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.78
Marker Score: 596 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: 0.78
Marker Score: 1,861 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.78
Marker Score: 807 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.78
Marker Score: 231 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 0.77
Marker Score: 2,837 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.77
Marker Score: 1,681 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 0.75
Marker Score: 754 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.75
Marker Score: 3,119 - Cell Name: osteoclast (CL0000092)
Fold Change: 0.73
Marker Score: 363 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.72
Marker Score: 374 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.72
Marker Score: 969 - Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
Fold Change: 0.72
Marker Score: 764 - Cell Name: Mueller cell (CL0000636)
Fold Change: 0.72
Marker Score: 998 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.72
Marker Score: 7,216 - Cell Name: adventitial cell (CL0002503)
Fold Change: 0.72
Marker Score: 177 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: 0.72
Marker Score: 377 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: 0.71
Marker Score: 414 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 0.71
Marker Score: 533 - Cell Name: brush cell (CL0002204)
Fold Change: 0.7
Marker Score: 643 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.7
Marker Score: 2,955 - Cell Name: skeletal muscle satellite cell (CL0000594)
Fold Change: 0.7
Marker Score: 469 - Cell Name: proerythroblast (CL0000547)
Fold Change: 0.69
Marker Score: 470 - Cell Name: type II pneumocyte (CL0002063)
Fold Change: 0.69
Marker Score: 4,507 - Cell Name: P/D1 enteroendocrine cell (CL0002268)
Fold Change: 0.69
Marker Score: 256 - Cell Name: hepatic stellate cell (CL0000632)
Fold Change: 0.68
Marker Score: 258 - Cell Name: thymocyte (CL0000893)
Fold Change: 0.68
Marker Score: 713 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.68
Marker Score: 173 - Cell Name: microglial cell (CL0000129)
Fold Change: 0.67
Marker Score: 1,215 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: 0.67
Marker Score: 704 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 0.66
Marker Score: 762 - Cell Name: medullary thymic epithelial cell (CL0002365)
Fold Change: 0.66
Marker Score: 1,077 - Cell Name: hepatocyte (CL0000182)
Fold Change: 0.66
Marker Score: 448 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 0.65
Marker Score: 814 - Cell Name: respiratory epithelial cell (CL0002368)
Fold Change: 0.65
Marker Score: 358 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.65
Marker Score: 190
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 145001487
Symbol: SYAC_HUMAN
Name: Renal carcinoma antigen NY-REN-42
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7654687
Title: Human alanyl-tRNA synthetase: conservation in evolution of catalytic core and microhelix recognition.
PubMed ID: 7654687
DOI: 10.1021/bi00033a004
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15616553
Title: The sequence and analysis of duplication-rich human chromosome 16.
PubMed ID: 15616553
DOI: 10.1038/nature03187
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10508479
Title: Antigens recognized by autologous antibody in patients with renal-cell carcinoma.
PubMed ID: 10508479
DOI: 10.1002/(sici)1097-0215(19991112)83:4<456::aid-ijc4>3.0.co;2-5
PubMed ID: 16139798
Title: Proteomic identification of proteins conjugated to ISG15 in mouse and human cells.
PubMed ID: 16139798
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19661429
Title: The C-Ala domain brings together editing and aminoacylation functions on one tRNA.
PubMed ID: 19661429
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22223895
Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.
PubMed ID: 22223895
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25817015
Title: Loss-of-function alanyl-tRNA synthetase mutations cause an autosomal-recessive early-onset epileptic encephalopathy with persistent myelination defect.
PubMed ID: 25817015
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 31775912
Title: An AARS variant as the likely cause of Swedish type hereditary diffuse leukoencephalopathy with spheroids.
PubMed ID: 31775912
PubMed ID: 33909043
Title: Protein instability associated with AARS1 and MARS1 mutations causes trichothiodystrophy.
PubMed ID: 33909043
DOI: 10.1093/hmg/ddab123
PubMed ID: 27622773
Title: Evolutionary Gain of Alanine Mischarging to Noncognate tRNAs with a G4:U69 Base Pair.
PubMed ID: 27622773
DOI: 10.1021/jacs.6b07121
PubMed ID: 27911835
Title: Two crystal structures reveal design for repurposing the C-Ala domain of human AlaRS.
PubMed ID: 27911835
PubMed ID: 32611769
Title: Methyltransferase-like 21C (METTL21C) methylates alanine tRNA synthetase at Lys-943 in muscle tissue.
PubMed ID: 32611769
PubMed ID: 20045102
Title: A major determinant for binding and aminoacylation of tRNA(Ala) in cytoplasmic Alanyl-tRNA synthetase is mutated in dominant axonal Charcot-Marie-Tooth disease.
PubMed ID: 20045102
PubMed ID: 22206013
Title: The mutational spectrum in a cohort of Charcot-Marie-Tooth disease type 2 among the Han Chinese in Taiwan.
PubMed ID: 22206013
PubMed ID: 22009580
Title: A recurrent loss-of-function alanyl-tRNA synthetase (AARS) mutation in patients with Charcot-Marie-Tooth disease type 2N (CMT2N).
PubMed ID: 22009580
DOI: 10.1002/humu.21635
PubMed ID: 24627108
Title: Whole-exome sequencing in patients with inherited neuropathies: outcome and challenges.
PubMed ID: 24627108
PubMed ID: 28493438
Title: Deficient activity of alanyl-tRNA synthetase underlies an autosomal recessive syndrome of progressive microcephaly, hypomyelination, and epileptic encephalopathy.
PubMed ID: 28493438
DOI: 10.1002/humu.23250
Sequence Information:
- Length: 968
- Mass: 106810
- Checksum: 8683F111CEE42506
- Sequence:
MDSTLTASEI RQRFIDFFKR NEHTYVHSSA TIPLDDPTLL FANAGMNQFK PIFLNTIDPS HPMAKLSRAA NTQKCIRAGG KHNDLDDVGK DVYHHTFFEM LGSWSFGDYF KELACKMALE LLTQEFGIPI ERLYVTYFGG DEAAGLEADL ECKQIWQNLG LDDTKILPGN MKDNFWEMGD TGPCGPCSEI HYDRIGGRDA AHLVNQDDPN VLEIWNLVFI QYNREADGIL KPLPKKSIDT GMGLERLVSV LQNKMSNYDT DLFVPYFEAI QKGTGARPYT GKVGAEDADG IDMAYRVLAD HARTITVALA DGGRPDNTGR GYVLRRILRR AVRYAHEKLN ASRGFFATLV DVVVQSLGDA FPELKKDPDM VKDIINEEEV QFLKTLSRGR RILDRKIQSL GDSKTIPGDT AWLLYDTYGF PVDLTGLIAE EKGLVVDMDG FEEERKLAQL KSQGKGAGGE DLIMLDIYAI EELRARGLEV TDDSPKYNYH LDSSGSYVFE NTVATVMALR REKMFVEEVS TGQECGVVLD KTCFYAEQGG QIYDEGYLVK VDDSSEDKTE FTVKNAQVRG GYVLHIGTIY GDLKVGDQVW LFIDEPRRRP IMSNHTATHI LNFALRSVLG EADQKGSLVA PDRLRFDFTA KGAMSTQQIK KAEEIANEMI EAAKAVYTQD CPLAAAKAIQ GLRAVFDETY PDPVRVVSIG VPVSELLDDP SGPAGSLTSV EFCGGTHLRN SSHAGAFVIV TEEAIAKGIR RIVAVTGAEA QKALRKAESL KKCLSVMEAK VKAQTAPNKD VQREIADLGE ALATAVIPQW QKDELRETLK SLKKVMDDLD RASKADVQKR VLEKTKQFID SNPNQPLVIL EMESGASAKA LNEALKLFKM HSPQTSAMLF TVDNEAGKIT CLCQVPQNAA NRGLKASEWV QQVSGLMDGK GGGKDVSAQA TGKNVGCLQE ALQLATSFAQ LRLGDVKN
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.