Details for: AARS1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: skeletal muscle satellite stem cell (CL0008011)
CSI Score: 13.2 - Cell Name: conjunctival epithelial cell (CL1000432)
CSI Score: 6.5 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
CSI Score: 5.9 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
CSI Score: 4.5 - Cell Name: GABAergic neuron (CL0000617)
CSI Score: 4.0 - Cell Name: glutamatergic neuron (CL0000679)
CSI Score: 3.7 - Cell Name: retinal ganglion cell (CL0000740)
CSI Score: 3.3 - Cell Name: oligodendrocyte (CL0000128)
CSI Score: 3.3 - Cell Name: retinal blood vessel endothelial cell (CL0002585)
CSI Score: 3.2 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
CSI Score: 3.2 - Cell Name: placental villous trophoblast (CL2000060)
CSI Score: 3.1 - Cell Name: malignant cell (CL0001064)
CSI Score: 3.1 - Cell Name: epithelial cell (CL0000066)
CSI Score: 3.0 - Cell Name: pancreatic acinar cell (CL0002064)
CSI Score: 3.0 - Cell Name: corneal epithelial cell (CL0000575)
CSI Score: 3.0 - Cell Name: exhausted T cell (CL0011025)
CSI Score: 3.0 - Cell Name: goblet cell (CL0000160)
CSI Score: 2.8 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
CSI Score: 2.8 - Cell Name: basal cell (CL0000646)
CSI Score: 2.7 - Cell Name: retinal rod cell (CL0000604)
CSI Score: 2.7 - Cell Name: epithelial cell of proximal tubule (CL0002306)
CSI Score: 2.6 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
CSI Score: 2.6 - Cell Name: stratified epithelial cell (CL0000079)
CSI Score: 2.5 - Cell Name: hepatocyte (CL0000182)
CSI Score: 2.5 - Cell Name: glial cell (CL0000125)
CSI Score: 2.5 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
CSI Score: 2.5 - Cell Name: myeloid leukocyte (CL0000766)
CSI Score: 2.4 - Cell Name: lung ciliated cell (CL1000271)
CSI Score: 2.4 - Cell Name: peripheral nervous system neuron (CL2000032)
CSI Score: 2.4 - Cell Name: enterocyte (CL0000584)
CSI Score: 2.4 - Cell Name: mesenchymal stem cell (CL0000134)
CSI Score: 2.3 - Cell Name: ON-bipolar cell (CL0000749)
CSI Score: 2.3 - Cell Name: mesodermal cell (CL0000222)
CSI Score: 2.2 - Cell Name: neuron (CL0000540)
CSI Score: 2.1 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
CSI Score: 2.1 - Cell Name: OFF-bipolar cell (CL0000750)
CSI Score: 2.1 - Cell Name: melanocyte (CL0000148)
CSI Score: 2.1 - Cell Name: glioblast (CL0000030)
CSI Score: 2.1 - Cell Name: obsolete animal cell (CL0000548)
CSI Score: 2.1 - Cell Name: retinal bipolar neuron (CL0000748)
CSI Score: 2.0 - Cell Name: alveolar macrophage (CL0000583)
CSI Score: 2.0 - Cell Name: Mueller cell (CL0000636)
CSI Score: 2.0 - Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
CSI Score: 2.0 - Cell Name: mesenchymal cell (CL0008019)
CSI Score: 2.0 - Cell Name: astrocyte (CL0000127)
CSI Score: 1.9 - Cell Name: neuroblast (sensu Nematoda and Protostomia) (CL0000338)
CSI Score: 1.9 - Cell Name: mature alpha-beta T cell (CL0000791)
CSI Score: 1.8 - Cell Name: pulmonary alveolar type 2 cell (CL0002063)
CSI Score: 1.8 - Cell Name: secretory cell (CL0000151)
CSI Score: 1.8 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
CSI Score: 1.8 - Cell Name: cardiac endothelial cell (CL0010008)
CSI Score: 1.8 - Cell Name: myofibroblast cell (CL0000186)
CSI Score: 1.8 - Cell Name: fibroblast of cardiac tissue (CL0002548)
CSI Score: 1.7 - Cell Name: inhibitory interneuron (CL0000498)
CSI Score: 1.7 - Cell Name: myeloid cell (CL0000763)
CSI Score: 1.7 - Cell Name: extravillous trophoblast (CL0008036)
CSI Score: 1.7 - Cell Name: luminal cell of prostate epithelium (CL0002340)
CSI Score: 1.6 - Cell Name: cardiac muscle cell (CL0000746)
CSI Score: 1.6 - Cell Name: CD8-positive, alpha-beta T cell (CL0000625)
CSI Score: 1.6 - Cell Name: ciliated cell (CL0000064)
CSI Score: 1.5 - Cell Name: muscle cell (CL0000187)
CSI Score: 1.5 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
CSI Score: 1.5 - Cell Name: CD4-positive, alpha-beta T cell (CL0000624)
CSI Score: 1.5 - Cell Name: intestinal epithelial cell (CL0002563)
CSI Score: 1.4 - Cell Name: CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL0001203)
CSI Score: 1.4 - Cell Name: mononuclear phagocyte (CL0000113)
CSI Score: 1.4 - Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
CSI Score: 1.3 - Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
CSI Score: 1.3 - Cell Name: macrophage (CL0000235)
CSI Score: 1.2 - Cell Name: naive B cell (CL0000788)
CSI Score: 1.2 - Cell Name: blood vessel endothelial cell (CL0000071)
CSI Score: 1.1 - Cell Name: enteric smooth muscle cell (CL0002504)
CSI Score: 1.1 - Cell Name: renal principal cell (CL0005009)
CSI Score: 1.1 - Cell Name: naive thymus-derived CD4-positive, alpha-beta T cell (CL0000895)
CSI Score: 1.1 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
CSI Score: 1.1 - Cell Name: neural progenitor cell (CL0011020)
CSI Score: 1.1 - Cell Name: regular ventricular cardiac myocyte (CL0002131)
CSI Score: 1.1 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
CSI Score: 1.1 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
CSI Score: 1.0 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
CSI Score: 1.0 - Cell Name: ciliated epithelial cell (CL0000067)
CSI Score: 1.0 - Cell Name: endothelial cell (CL0000115)
CSI Score: 1.0 - Cell Name: forebrain radial glial cell (CL0013000)
CSI Score: 1.0 - Cell Name: effector memory CD8-positive, alpha-beta T cell (CL0000913)
CSI Score: 0.9 - Cell Name: squamous epithelial cell (CL0000076)
CSI Score: 0.9 - Cell Name: paneth cell (CL0000510)
CSI Score: 0.9 - Cell Name: central memory CD4-positive, alpha-beta T cell (CL0000904)
CSI Score: 0.9 - Cell Name: effector CD4-positive, alpha-beta T cell (CL0001044)
CSI Score: 0.9 - Cell Name: retina horizontal cell (CL0000745)
CSI Score: 0.9 - Cell Name: L4 intratelencephalic projecting glutamatergic neuron (CL4030063)
CSI Score: 0.8 - Cell Name: stem cell (CL0000034)
CSI Score: 0.8 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
CSI Score: 0.8 - Cell Name: microglial cell (CL0000129)
CSI Score: 0.8 - Cell Name: radial glial cell (CL0000681)
CSI Score: 0.8 - Cell Name: mature NK T cell (CL0000814)
CSI Score: 0.8 - Cell Name: CD8-positive, alpha-beta memory T cell (CL0000909)
CSI Score: 0.7 - Cell Name: capillary endothelial cell (CL0002144)
CSI Score: 0.7 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
CSI Score: 0.7 - Cell Name: memory B cell (CL0000787)
CSI Score: 0.7 - Cell Name: duct epithelial cell (CL0000068)
CSI Score: 0.7
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 145001487
Symbol: SYAC_HUMAN
Name: Renal carcinoma antigen NY-REN-42
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7654687
Title: Human alanyl-tRNA synthetase: conservation in evolution of catalytic core and microhelix recognition.
PubMed ID: 7654687
DOI: 10.1021/bi00033a004
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15616553
Title: The sequence and analysis of duplication-rich human chromosome 16.
PubMed ID: 15616553
DOI: 10.1038/nature03187
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10508479
Title: Antigens recognized by autologous antibody in patients with renal-cell carcinoma.
PubMed ID: 10508479
DOI: 10.1002/(sici)1097-0215(19991112)83:4<456::aid-ijc4>3.0.co;2-5
PubMed ID: 16139798
Title: Proteomic identification of proteins conjugated to ISG15 in mouse and human cells.
PubMed ID: 16139798
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19661429
Title: The C-Ala domain brings together editing and aminoacylation functions on one tRNA.
PubMed ID: 19661429
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22223895
Title: Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features.
PubMed ID: 22223895
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25817015
Title: Loss-of-function alanyl-tRNA synthetase mutations cause an autosomal-recessive early-onset epileptic encephalopathy with persistent myelination defect.
PubMed ID: 25817015
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 31775912
Title: An AARS variant as the likely cause of Swedish type hereditary diffuse leukoencephalopathy with spheroids.
PubMed ID: 31775912
PubMed ID: 33909043
Title: Protein instability associated with AARS1 and MARS1 mutations causes trichothiodystrophy.
PubMed ID: 33909043
DOI: 10.1093/hmg/ddab123
PubMed ID: 38653238
Title: Alanyl-tRNA synthetase, AARS1, is a lactate sensor and lactyltransferase that lactylates p53 and contributes to tumorigenesis.
PubMed ID: 38653238
PubMed ID: 38512451
Title: The alanyl-tRNA synthetase AARS1 moonlights as a lactyltransferase to promote YAP signaling in gastric cancer.
PubMed ID: 38512451
DOI: 10.1172/jci174587
PubMed ID: 27622773
Title: Evolutionary Gain of Alanine Mischarging to Noncognate tRNAs with a G4:U69 Base Pair.
PubMed ID: 27622773
DOI: 10.1021/jacs.6b07121
PubMed ID: 27911835
Title: Two crystal structures reveal design for repurposing the C-Ala domain of human AlaRS.
PubMed ID: 27911835
PubMed ID: 29273753
Title: Double mimicry evades tRNA synthetase editing by toxic vegetable-sourced non-proteinogenic amino acid.
PubMed ID: 29273753
PubMed ID: 32611769
Title: Methyltransferase-like 21C (METTL21C) methylates alanine tRNA synthetase at Lys-943 in muscle tissue.
PubMed ID: 32611769
PubMed ID: 20045102
Title: A major determinant for binding and aminoacylation of tRNA(Ala) in cytoplasmic Alanyl-tRNA synthetase is mutated in dominant axonal Charcot-Marie-Tooth disease.
PubMed ID: 20045102
PubMed ID: 22206013
Title: The mutational spectrum in a cohort of Charcot-Marie-Tooth disease type 2 among the Han Chinese in Taiwan.
PubMed ID: 22206013
PubMed ID: 22009580
Title: A recurrent loss-of-function alanyl-tRNA synthetase (AARS) mutation in patients with Charcot-Marie-Tooth disease type 2N (CMT2N).
PubMed ID: 22009580
DOI: 10.1002/humu.21635
PubMed ID: 24627108
Title: Whole-exome sequencing in patients with inherited neuropathies: outcome and challenges.
PubMed ID: 24627108
PubMed ID: 28493438
Title: Deficient activity of alanyl-tRNA synthetase underlies an autosomal recessive syndrome of progressive microcephaly, hypomyelination, and epileptic encephalopathy.
PubMed ID: 28493438
DOI: 10.1002/humu.23250
PubMed ID: 35971119
Title: Clinical characteristics and proteome modifications in two Charcot-Marie-Tooth families with the AARS1 Arg326Trp mutation.
PubMed ID: 35971119
PubMed ID: 35911843
Title: Case Report: Early-Onset Charcot-Marie-Tooth 2N With Reversible White Matter Lesions Repeatedly Mimicked Stroke or Encephalitis.
PubMed ID: 35911843
PubMed ID: 37106376
Title: An AARS1 variant identified to cause adult-onset leukoencephalopathy with neuroaxonal spheroids and pigmented glia.
PubMed ID: 37106376
Sequence Information:
- Length: 968
- Mass: 106810
- Checksum: 8683F111CEE42506
- Sequence:
MDSTLTASEI RQRFIDFFKR NEHTYVHSSA TIPLDDPTLL FANAGMNQFK PIFLNTIDPS HPMAKLSRAA NTQKCIRAGG KHNDLDDVGK DVYHHTFFEM LGSWSFGDYF KELACKMALE LLTQEFGIPI ERLYVTYFGG DEAAGLEADL ECKQIWQNLG LDDTKILPGN MKDNFWEMGD TGPCGPCSEI HYDRIGGRDA AHLVNQDDPN VLEIWNLVFI QYNREADGIL KPLPKKSIDT GMGLERLVSV LQNKMSNYDT DLFVPYFEAI QKGTGARPYT GKVGAEDADG IDMAYRVLAD HARTITVALA DGGRPDNTGR GYVLRRILRR AVRYAHEKLN ASRGFFATLV DVVVQSLGDA FPELKKDPDM VKDIINEEEV QFLKTLSRGR RILDRKIQSL GDSKTIPGDT AWLLYDTYGF PVDLTGLIAE EKGLVVDMDG FEEERKLAQL KSQGKGAGGE DLIMLDIYAI EELRARGLEV TDDSPKYNYH LDSSGSYVFE NTVATVMALR REKMFVEEVS TGQECGVVLD KTCFYAEQGG QIYDEGYLVK VDDSSEDKTE FTVKNAQVRG GYVLHIGTIY GDLKVGDQVW LFIDEPRRRP IMSNHTATHI LNFALRSVLG EADQKGSLVA PDRLRFDFTA KGAMSTQQIK KAEEIANEMI EAAKAVYTQD CPLAAAKAIQ GLRAVFDETY PDPVRVVSIG VPVSELLDDP SGPAGSLTSV EFCGGTHLRN SSHAGAFVIV TEEAIAKGIR RIVAVTGAEA QKALRKAESL KKCLSVMEAK VKAQTAPNKD VQREIADLGE ALATAVIPQW QKDELRETLK SLKKVMDDLD RASKADVQKR VLEKTKQFID SNPNQPLVIL EMESGASAKA LNEALKLFKM HSPQTSAMLF TVDNEAGKIT CLCQVPQNAA NRGLKASEWV QQVSGLMDGK GGGKDVSAQA TGKNVGCLQE ALQLATSFAQ LRLGDVKN
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.