Genular: Defining Cellular Identity and Function

Details for: Lum

Gene ID: 17022

Symbol: Lum

Ensembl ID: ENSMUSG00000036446

Description: lumican

Associated with

Extracellular matrix organization
(R-MMU-1474244)
Glycosaminoglycan metabolism
(R-MMU-1630316)
Integrin cell surface interactions
(R-MMU-216083)
Keratan sulfate/keratin metabolism
(R-MMU-1638074)
Keratan sulfate biosynthesis
(R-MMU-2022854)
Keratan sulfate degradation
(R-MMU-2022857)
Metabolism
(R-MMU-1430728)
Metabolism of carbohydrates
(R-MMU-71387)
Collagen-containing extracellular matrix
(GO:0062023)
Collagen binding
(GO:0005518)
Extracellular matrix
(GO:0031012)
Extracellular matrix structural constituent conferring compression resistance
(GO:0030021)
Extracellular region
(GO:0005576)
Extracellular space
(GO:0005615)
Fibrillar collagen trimer
(GO:0005583)
Positive regulation of transcription by rna polymerase ii
(GO:0045944)
Positive regulation of transforming growth factor beta1 production
(GO:0032914)

Other Information

Proteins

Lumican

Genular Protein ID: 696795276

Symbol: LUM_MOUSE

Name: Lumican

UniProtKB Accession Codes:

P51885 Q3TP25 Q99JZ3 Q9CXK0

Database IDs:

Citations:

PubMed ID: 7558724

Title: Sequence, molecular properties, and chromosomal mapping of mouse lumican.

PubMed ID: 7558724

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17558413

Title: Determination of the sites of tyrosine O-sulfation in peptides and proteins.

PubMed ID: 17558413

DOI: 10.1038/nmeth1056

PubMed ID: 16944957

Title: Proteome-wide characterization of N-glycosylation events by diagonal chromatography.

PubMed ID: 16944957

DOI: 10.1021/pr060186m

PubMed ID: 17330941

Title: Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides.

PubMed ID: 17330941

DOI: 10.1021/pr0604559

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

Sequence Information:

Length: 338
Mass: 38265
Checksum: FF1E050C89779140
Sequence:

MNVCAFSLAL ALVGSVSGQY YDYDIPLFMY GQISPNCAPE CNCPHSYPTA MYCDDLKLKS 
VPMVPPGIKY LYLRNNQIDH IDEKAFENVT DLQWLILDHN LLENSKIKGK VFSKLKQLKK 
LHINYNNLTE SVGPLPKSLQ DLQLTNNKIS KLGSFDGLVN LTFIYLQHNQ LKEDAVSASL 
KGLKSLEYLD LSFNQMSKLP AGLPTSLLTL YLDNNKISNI PDEYFKRFTG LQYLRLSHNE 
LADSGVPGNS FNISSLLELD LSYNKLKSIP TVNENLENYY LEVNELEKFD VKSFCKILGP 
LSYSKIKHLR LDGNPLTQSS LPPDMYECLR VANEITVN

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Lum

Associated with

Other Information

Sequence, molecular properties, and chromosomal mapping of mouse lumican. PubMed ID: 7558724

The transcriptional landscape of the mammalian genome. PubMed ID: 16141072

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Determination of the sites of tyrosine O-sulfation in peptides and proteins. PubMed ID: 17558413

Proteome-wide characterization of N-glycosylation events by diagonal chromatography. PubMed ID: 16944957

Enhanced analysis of the mouse plasma proteome using cysteine-containing tryptic glycopeptides. PubMed ID: 17330941

A tissue-specific atlas of mouse protein phosphorylation and expression. PubMed ID: 21183079