Associated with
Cells (max top 100)
(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: granulocyte monocyte progenitor cell (CL0000557)
Fold Change: 1.37
Marker Score: 867 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 1.27
Marker Score: 2400 - Cell Name: goblet cell (CL0000160)
Fold Change: 1.05
Marker Score: 6967 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: 1.04
Marker Score: 251801 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71819 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 48044 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30408 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2426 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.94
Marker Score: 5351 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.92
Marker Score: 2741 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5286 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 0.85
Marker Score: 1736.5 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.82
Marker Score: 625 - Cell Name: germ cell (CL0000586)
Fold Change: 0.8
Marker Score: 1391 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.79
Marker Score: 12430 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.78
Marker Score: 1264 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.77
Marker Score: 366 - Cell Name: brush cell (CL0002204)
Fold Change: 0.76
Marker Score: 697 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.76
Marker Score: 393 - Cell Name: kidney proximal convoluted tubule epithelial cell (CL1000838)
Fold Change: 0.73
Marker Score: 1502.5 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.69
Marker Score: 177 - Cell Name: renal interstitial pericyte (CL1001318)
Fold Change: 0.66
Marker Score: 626 - Cell Name: kidney interstitial cell (CL1000500)
Fold Change: 0.64
Marker Score: 453 - Cell Name: preosteoblast (CL0007010)
Fold Change: 0.63
Marker Score: 178 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.56
Marker Score: 444 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.56
Marker Score: 334 - Cell Name: common myeloid progenitor (CL0000049)
Fold Change: 0.55
Marker Score: 147 - Cell Name: osteoblast (CL0000062)
Fold Change: 0.53
Marker Score: 286 - Cell Name: chondrocyte (CL0000138)
Fold Change: 0.48
Marker Score: 217 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 0.44
Marker Score: 16105 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 0.42
Marker Score: 174 - Cell Name: epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.39
Marker Score: 175 - Cell Name: pro-B cell (CL0000826)
Fold Change: 0.38
Marker Score: 371 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 0.38
Marker Score: 582 - Cell Name: oogonial cell (CL0000024)
Fold Change: 0.37
Marker Score: 539 - Cell Name: neuronal receptor cell (CL0000006)
Fold Change: 0.37
Marker Score: 165 - Cell Name: Sertoli cell (CL0000216)
Fold Change: 0.37
Marker Score: 2203 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 0.37
Marker Score: 369 - Cell Name: mesangial cell (CL0000650)
Fold Change: 0.36
Marker Score: 435.5 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: 0.34
Marker Score: 1416 - Cell Name: erythroblast (CL0000765)
Fold Change: 0.3
Marker Score: 190 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 0.28
Marker Score: 1049 - Cell Name: mast cell (CL0000097)
Fold Change: 0.28
Marker Score: 162 - Cell Name: renal alpha-intercalated cell (CL0005011)
Fold Change: 0.26
Marker Score: 135 - Cell Name: B cell (CL0000236)
Fold Change: 0.24
Marker Score: 228.5 - Cell Name: connective tissue cell (CL0002320)
Fold Change: 0.24
Marker Score: 62 - Cell Name: taste receptor cell (CL0000209)
Fold Change: 0.23
Marker Score: 195 - Cell Name: male germ cell (CL0000015)
Fold Change: 0.23
Marker Score: 65 - Cell Name: renal beta-intercalated cell (CL0002201)
Fold Change: 0.22
Marker Score: 69 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.22
Marker Score: 70 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 0.22
Marker Score: 271 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 0.2
Marker Score: 119 - Cell Name: parietal epithelial cell (CL1000452)
Fold Change: 0.2
Marker Score: 72 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 0.2
Marker Score: 333 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.19
Marker Score: 454 - Cell Name: supporting cell (CL0000630)
Fold Change: 0.19
Marker Score: 357 - Cell Name: precursor B cell (CL0000817)
Fold Change: 0.18
Marker Score: 122 - Cell Name: megakaryocyte (CL0000556)
Fold Change: 0.18
Marker Score: 101 - Cell Name: interneuron (CL0000099)
Fold Change: 0.17
Marker Score: 79 - Cell Name: Leydig cell (CL0000178)
Fold Change: 0.17
Marker Score: 183 - Cell Name: renal principal cell (CL0005009)
Fold Change: 0.16
Marker Score: 121 - Cell Name: muscle cell (CL0000187)
Fold Change: 0.16
Marker Score: 44 - Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
Fold Change: 0.15
Marker Score: 157 - Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
Fold Change: 0.15
Marker Score: 32 - Cell Name: Unknown (CL0002371)
Fold Change: 0.14
Marker Score: 149 - Cell Name: pericyte (CL0000669)
Fold Change: 0.14
Marker Score: 81 - Cell Name: smooth muscle cell (CL0000192)
Fold Change: 0.14
Marker Score: 90 - Cell Name: oligodendrocyte precursor cell (CL0002453)
Fold Change: 0.14
Marker Score: 168 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 0.13
Marker Score: 120 - Cell Name: kidney capillary endothelial cell (CL1000892)
Fold Change: 0.13
Marker Score: 42 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 0.13
Marker Score: 553 - Cell Name: astrocyte (CL0000127)
Fold Change: 0.13
Marker Score: 115 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.13
Marker Score: 4451 - Cell Name: keratocyte (CL0002363)
Fold Change: 0.13
Marker Score: 29 - Cell Name: epithelial cell of glomerular capsule (CL1000450)
Fold Change: 0.13
Marker Score: 32 - Cell Name: vascular associated smooth muscle cell (CL0000359)
Fold Change: 0.12
Marker Score: 57 - Cell Name: innate lymphoid cell (CL0001065)
Fold Change: 0.12
Marker Score: 44 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.12
Marker Score: 2167 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: 0.12
Marker Score: 564 - Cell Name: oocyte (CL0000023)
Fold Change: 0.12
Marker Score: 30 - Cell Name: erythrocyte (CL0000232)
Fold Change: 0.12
Marker Score: 66 - Cell Name: late promyelocyte (CL0002151)
Fold Change: 0.12
Marker Score: 29 - Cell Name: precursor cell (CL0011115)
Fold Change: 0.12
Marker Score: 28 - Cell Name: blood vessel smooth muscle cell (CL0019018)
Fold Change: 0.11
Marker Score: 30 - Cell Name: epithelial cell of lower respiratory tract (CL0002632)
Fold Change: 0.11
Marker Score: 472 - Cell Name: muscle precursor cell (CL0000680)
Fold Change: 0.11
Marker Score: 29 - Cell Name: podocyte (CL0000653)
Fold Change: 0.11
Marker Score: 41 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.11
Marker Score: 32 - Cell Name: dendritic cell (CL0000451)
Fold Change: 0.11
Marker Score: 75 - Cell Name: retinal pigment epithelial cell (CL0002586)
Fold Change: 0.11
Marker Score: 31 - Cell Name: adventitial cell (CL0002503)
Fold Change: 0.11
Marker Score: 26 - Cell Name: macrophage (CL0000235)
Fold Change: 0.1
Marker Score: 116 - Cell Name: megakaryocyte progenitor cell (CL0000553)
Fold Change: 0.1
Marker Score: 29 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: 0.1
Marker Score: 54 - Cell Name: hepatoblast (CL0005026)
Fold Change: 0.1
Marker Score: 328 - Cell Name: contractile cell (CL0000183)
Fold Change: 0.1
Marker Score: 54 - Cell Name: neuron (CL0000540)
Fold Change: 0.1
Marker Score: 404 - Cell Name: tracheobronchial smooth muscle cell (CL0019019)
Fold Change: 0.1
Marker Score: 29 - Cell Name: mesothelial cell of epicardium (CL0011019)
Fold Change: 0.1
Marker Score: 31 - Cell Name: bronchial smooth muscle cell (CL0002598)
Fold Change: 0.1
Marker Score: 27
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Other Information
Genular Protein ID: 3653008861
Symbol: PGCA_HUMAN
Name: Aggrecan core protein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1985970
Title: Complete coding sequence and deduced primary structure of the human cartilage large aggregating proteoglycan, aggrecan. Human-specific repeats, and additional alternatively spliced forms.
PubMed ID: 1985970
PubMed ID: 16572171
Title: Analysis of the DNA sequence and duplication history of human chromosome 15.
PubMed ID: 16572171
DOI: 10.1038/nature04601
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 7574678
Title: Catabolism of aggrecan by explant cultures of human articular cartilage in the presence of retinoic acid.
PubMed ID: 7574678
PubMed ID: 1569188
Title: The structure of aggrecan fragments in human synovial fluid. Evidence for the involvement in osteoarthritis of a novel proteinase which cleaves the Glu 373-Ala 374 bond of the interglobular domain.
PubMed ID: 1569188
DOI: 10.1172/jci115742
PubMed ID: 7524681
Title: Analysis of aggrecan and tenascin gene expression in mouse skeletal tissues by northern and in situ hybridization using species specific cDNA probes.
PubMed ID: 7524681
PubMed ID: 8216415
Title: The structure of aggrecan fragments in human synovial fluid. Evidence that aggrecanase mediates cartilage degradation in inflammatory joint disease, joint injury, and osteoarthritis.
PubMed ID: 8216415
PubMed ID: 7827755
Title: Length variation in the keratan sulfate domain of mammalian aggrecan.
PubMed ID: 7827755
PubMed ID: 8611178
Title: Age-related changes in the content of the C-terminal region of aggrecan in human articular cartilage.
PubMed ID: 8611178
DOI: 10.1042/bj3130933
PubMed ID: 2789216
Title: A new epidermal growth factor-like domain in the human core protein for the large cartilage-specific proteoglycan. Evidence for alternative splicing of the domain.
PubMed ID: 2789216
PubMed ID: 16080123
Title: A mutation in the variable repeat region of the aggrecan gene (AGC1) causes a form of spondyloepiphyseal dysplasia associated with severe, premature osteoarthritis.
PubMed ID: 16080123
DOI: 10.1086/444401
PubMed ID: 16335952
Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.
PubMed ID: 16335952
DOI: 10.1021/pr0502065
PubMed ID: 17588949
Title: Interaction of cartilage oligomeric matrix protein/thrombospondin 5 with aggrecan.
PubMed ID: 17588949
PubMed ID: 32337544
Title: An affinity chromatography and glycoproteomics workflow to profile the chondroitin sulfate proteoglycans that interact with malarial VAR2CSA in the placenta and in cancer.
PubMed ID: 32337544
PubMed ID: 36213313
Title: Mass spectrometric analysis of chondroitin sulfate-linked peptides.
PubMed ID: 36213313
PubMed ID: 19110214
Title: A recessive skeletal dysplasia, SEMD aggrecan type, results from a missense mutation affecting the C-type lectin domain of aggrecan.
PubMed ID: 19110214
PubMed ID: 20137779
Title: A missense mutation in the aggrecan C-type lectin domain disrupts extracellular matrix interactions and causes dominant familial osteochondritis dissecans.
PubMed ID: 20137779
Sequence Information:
- Length: 2530
- Mass: 261329
- Checksum: 3C809F6DE829956B
- Sequence:
MTTLLWVFVT LRVITAAVTV ETSDHDNSLS VSIPQPSPLR VLLGTSLTIP CYFIDPMHPV TTAPSTAPLA PRIKWSRVSK EKEVVLLVAT EGRVRVNSAY QDKVSLPNYP AIPSDATLEV QSLRSNDSGV YRCEVMHGIE DSEATLEVVV KGIVFHYRAI STRYTLDFDR AQRACLQNSA IIATPEQLQA AYEDGFHQCD AGWLADQTVR YPIHTPREGC YGDKDEFPGV RTYGIRDTNE TYDVYCFAEE MEGEVFYATS PEKFTFQEAA NECRRLGARL ATTGQLYLAW QAGMDMCSAG WLADRSVRYP ISKARPNCGG NLLGVRTVYV HANQTGYPDP SSRYDAICYT GEDFVDIPEN FFGVGGEEDI TVQTVTWPDM ELPLPRNITE GEARGSVILT VKPIFEVSPS PLEPEEPFTF APEIGATAFA EVENETGEAT RPWGFPTPGL GPATAFTSED LVVQVTAVPG QPHLPGGVVF HYRPGPTRYS LTFEEAQQAC LRTGAVIASP EQLQAAYEAG YEQCDAGWLR DQTVRYPIVS PRTPCVGDKD SSPGVRTYGV RPSTETYDVY CFVDRLEGEV FFATRLEQFT FQEALEFCES HNATLATTGQ LYAAWSRGLD KCYAGWLADG SLRYPIVTPR PACGGDKPGV RTVYLYPNQT GLPDPLSRHH AFCFRGISAV PSPGEEEGGT PTSPSGVEEW IVTQVVPGVA AVPVEEETTA VPSGETTAIL EFTTEPENQT EWEPAYTPVG TSPLPGILPT WPPTGAATEE STEGPSATEV PSASEEPSPS EVPFPSEEPS PSEEPFPSVR PFPSVELFPS EEPFPSKEPS PSEEPSASEE PYTPSPPVPS WTELPSSGEE SGAPDVSGDF TGSGDVSGHL DFSGQLSGDR ASGLPSGDLD SSGLTSTVGS GLPVESGLPS GDEERIEWPS TPTVGELPSG AEILEGSASG VGDLSGLPSG EVLETSASGV GDLSGLPSGE VLETTAPGVE DISGLPSGEV LETTAPGVED ISGLPSGEVL ETTAPGVEDI SGLPSGEVLE TTAPGVEDIS GLPSGEVLET TAPGVEDISG LPSGEVLETT APGVEDISGL PSGEVLETAA PGVEDISGLP SGEVLETAAP GVEDISGLPS GEVLETAAPG VEDISGLPSG EVLETAAPGV EDISGLPSGE VLETAAPGVE DISGLPSGEV LETAAPGVED ISGLPSGEVL ETAAPGVEDI SGLPSGEVLE TAAPGVEDIS GLPSGEVLET AAPGVEDISG LPSGEVLETA APGVEDISGL PSGEVLETAA PGVEDISGLP SGEVLETAAP GVEDISGLPS GEVLETAAPG VEDISGLPSG EVLETAAPGV EDISGLPSGE VLETAAPGVE DISGLPSGEV LETAAPGVED ISGLPSGEVL ETTAPGVEEI SGLPSGEVLE TTAPGVDEIS GLPSGEVLET TAPGVEEISG LPSGEVLETS TSAVGDLSGL PSGGEVLEIS VSGVEDISGL PSGEVVETSA SGIEDVSELP SGEGLETSAS GVEDLSRLPS GEEVLEISAS GFGDLSGLPS GGEGLETSAS EVGTDLSGLP SGREGLETSA SGAEDLSGLP SGKEDLVGSA SGDLDLGKLP SGTLGSGQAP ETSGLPSGFS GEYSGVDLGS GPPSGLPDFS GLPSGFPTVS LVDSTLVEVV TASTASELEG RGTIGISGAG EISGLPSSEL DISGRASGLP SGTELSGQAS GSPDVSGEIP GLFGVSGQPS GFPDTSGETS GVTELSGLSS GQPGISGEAS GVLYGTSQPF GITDLSGETS GVPDLSGQPS GLPGFSGATS GVPDLVSGTT SGSGESSGIT FVDTSLVEVA PTTFKEEEGL GSVELSGLPS GEADLSGKSG MVDVSGQFSG TVDSSGFTSQ TPEFSGLPSG IAEVSGESSR AEIGSSLPSG AYYGSGTPSS FPTVSLVDRT LVESVTQAPT AQEAGEGPSG ILELSGAHSG APDMSGEHSG FLDLSGLQSG LIEPSGEPPG TPYFSGDFAS TTNVSGESSV AMGTSGEASG LPEVTLITSE FVEGVTEPTI SQELGQRPPV THTPQLFESS GKVSTAGDIS GATPVLPGSG VEVSSVPESS SETSAYPEAG FGASAAPEAS REDSGSPDLS ETTSAFHEAN LERSSGLGVS GSTLTFQEGE ASAAPEVSGE STTTSDVGTE APGLPSATPT ASGDRTEISG DLSGHTSQLG VVISTSIPES EWTQQTQRPA ETHLEIESSS LLYSGEETHT VETATSPTDA SIPASPEWKR ESESTAAAPA RSCAEEPCGA GTCKETEGHV ICLCPPGYTG EHCNIDQEVC EEGWNKYQGH CYRHFPDRET WVDAERRCRE QQSHLSSIVT PEEQEFVNNN AQDYQWIGLN DRTIEGDFRW SDGHPMQFEN WRPNQPDNFF AAGEDCVVMI WHEKGEWNDV PCNYHLPFTC KKGTVACGEP PVVEHARTFG QKKDRYEINS LVRYQCTEGF VQRHMPTIRC QPSGHWEEPQ ITCTDPTTYK RRLQKRSSRH PRRSRPSTAH
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.