Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 33.3665
Cell Significance Index: -5.1900 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 20.5012
Cell Significance Index: -5.2000 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: 1.3818
Cell Significance Index: 33.4700 - Cell Name: preosteoblast (CL0007010)
Fold Change: 0.6203
Cell Significance Index: 5.6300 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: 0.5093
Cell Significance Index: 7.8800 - Cell Name: keratocyte (CL0002363)
Fold Change: 0.5024
Cell Significance Index: 7.9700 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.4687
Cell Significance Index: 12.5600 - Cell Name: microcirculation associated smooth muscle cell (CL0008035)
Fold Change: 0.4250
Cell Significance Index: 3.5700 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.3803
Cell Significance Index: 8.3300 - Cell Name: chondroblast (CL0000058)
Fold Change: 0.2572
Cell Significance Index: 1.5100 - Cell Name: thymocyte (CL0000893)
Fold Change: 0.2430
Cell Significance Index: 3.0700 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 0.2130
Cell Significance Index: 1.8100 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 0.1690
Cell Significance Index: 1.0500 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: 0.0990
Cell Significance Index: 2.4700 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 0.0731
Cell Significance Index: 1.8800 - Cell Name: granulosa cell (CL0000501)
Fold Change: 0.0372
Cell Significance Index: 0.9800 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0224
Cell Significance Index: 15.4600 - Cell Name: hepatoblast (CL0005026)
Fold Change: 0.0065
Cell Significance Index: 0.1100 - Cell Name: Sertoli cell (CL0000216)
Fold Change: 0.0064
Cell Significance Index: 0.0900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0042
Cell Significance Index: 0.8500 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0019
Cell Significance Index: -3.5000 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0030
Cell Significance Index: -5.6200 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0033
Cell Significance Index: -0.4200 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0037
Cell Significance Index: -5.6900 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0048
Cell Significance Index: -6.5600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0062
Cell Significance Index: -4.5700 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: -0.0064
Cell Significance Index: -2.3100 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0065
Cell Significance Index: -4.1400 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0068
Cell Significance Index: -5.1800 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0077
Cell Significance Index: -5.7200 - Cell Name: fibroblast of dermis (CL0002551)
Fold Change: -0.0091
Cell Significance Index: -0.1900 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0096
Cell Significance Index: -5.2500 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0104
Cell Significance Index: -5.8800 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0106
Cell Significance Index: -4.8100 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0116
Cell Significance Index: -3.3500 - Cell Name: osteoclast (CL0000092)
Fold Change: -0.0122
Cell Significance Index: -0.1300 - Cell Name: neoplastic cell (CL0001063)
Fold Change: -0.0162
Cell Significance Index: -3.2200 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: -0.0223
Cell Significance Index: -4.0200 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.0237
Cell Significance Index: -0.3400 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0255
Cell Significance Index: -3.7000 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0286
Cell Significance Index: -6.0200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0290
Cell Significance Index: -3.5600 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0295
Cell Significance Index: -5.0300 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0356
Cell Significance Index: -4.6000 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0356
Cell Significance Index: -4.1500 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0374
Cell Significance Index: -3.8200 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.0377
Cell Significance Index: -0.8000 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0383
Cell Significance Index: -5.2600 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0485
Cell Significance Index: -5.5600 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0516
Cell Significance Index: -5.3700 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0537
Cell Significance Index: -1.5000 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: -0.0562
Cell Significance Index: -3.5400 - Cell Name: helper T cell (CL0000912)
Fold Change: -0.0584
Cell Significance Index: -0.8300 - Cell Name: taste receptor cell (CL0000209)
Fold Change: -0.0594
Cell Significance Index: -0.6900 - Cell Name: neuron associated cell (CL0000095)
Fold Change: -0.0627
Cell Significance Index: -2.5700 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0657
Cell Significance Index: -4.9000 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0665
Cell Significance Index: -4.4700 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0693
Cell Significance Index: -3.1400 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0697
Cell Significance Index: -5.3500 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0727
Cell Significance Index: -3.4200 - Cell Name: fibro/adipogenic progenitor cell (CL0009099)
Fold Change: -0.0728
Cell Significance Index: -3.6800 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0763
Cell Significance Index: -4.6900 - Cell Name: photoreceptor cell (CL0000210)
Fold Change: -0.0776
Cell Significance Index: -1.0900 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.0781
Cell Significance Index: -5.0400 - Cell Name: skeletal muscle myoblast (CL0000515)
Fold Change: -0.0791
Cell Significance Index: -0.8600 - Cell Name: kidney interstitial cell (CL1000500)
Fold Change: -0.0821
Cell Significance Index: -0.6200 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.0830
Cell Significance Index: -3.6100 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.0875
Cell Significance Index: -4.5600 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.0880
Cell Significance Index: -4.9400 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0973
Cell Significance Index: -3.4100 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: -0.1004
Cell Significance Index: -1.7200 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.1072
Cell Significance Index: -5.0000 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: -0.1082
Cell Significance Index: -2.8900 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.1094
Cell Significance Index: -4.8400 - Cell Name: myeloid lineage restricted progenitor cell (CL0000839)
Fold Change: -0.1133
Cell Significance Index: -1.5900 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.1183
Cell Significance Index: -4.1100 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.1265
Cell Significance Index: -4.7900 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.1324
Cell Significance Index: -4.8600 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.1390
Cell Significance Index: -4.5500 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.1473
Cell Significance Index: -4.6900 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: -0.1521
Cell Significance Index: -4.4800 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: -0.1632
Cell Significance Index: -1.3500 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.1674
Cell Significance Index: -4.8000 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: -0.1684
Cell Significance Index: -4.5100 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.1696
Cell Significance Index: -3.4100 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: -0.1700
Cell Significance Index: -4.8500 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.1746
Cell Significance Index: -3.6500 - Cell Name: connective tissue cell (CL0002320)
Fold Change: -0.1753
Cell Significance Index: -1.6900 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.1761
Cell Significance Index: -5.5700 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.1773
Cell Significance Index: -3.8300 - Cell Name: germ cell (CL0000586)
Fold Change: -0.1781
Cell Significance Index: -1.3500 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.1816
Cell Significance Index: -6.3800 - Cell Name: endothelial cell of venule (CL1000414)
Fold Change: -0.1849
Cell Significance Index: -2.1000 - Cell Name: skeletal muscle fibroblast (CL0011027)
Fold Change: -0.1874
Cell Significance Index: -1.2700 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.1888
Cell Significance Index: -4.7100 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.1903
Cell Significance Index: -3.1900 - Cell Name: pro-T cell (CL0000827)
Fold Change: -0.1953
Cell Significance Index: -4.9900 - Cell Name: erythrocyte (CL0000232)
Fold Change: -0.1962
Cell Significance Index: -5.0000 - Cell Name: myometrial cell (CL0002366)
Fold Change: -0.1971
Cell Significance Index: -2.2700 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.1997
Cell Significance Index: -4.7900
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3653008861
Symbol: PGCA_HUMAN
Name: Aggrecan core protein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 1985970
Title: Complete coding sequence and deduced primary structure of the human cartilage large aggregating proteoglycan, aggrecan. Human-specific repeats, and additional alternatively spliced forms.
PubMed ID: 1985970
PubMed ID: 16572171
Title: Analysis of the DNA sequence and duplication history of human chromosome 15.
PubMed ID: 16572171
DOI: 10.1038/nature04601
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 7574678
Title: Catabolism of aggrecan by explant cultures of human articular cartilage in the presence of retinoic acid.
PubMed ID: 7574678
PubMed ID: 1569188
Title: The structure of aggrecan fragments in human synovial fluid. Evidence for the involvement in osteoarthritis of a novel proteinase which cleaves the Glu 373-Ala 374 bond of the interglobular domain.
PubMed ID: 1569188
DOI: 10.1172/jci115742
PubMed ID: 7524681
Title: Analysis of aggrecan and tenascin gene expression in mouse skeletal tissues by northern and in situ hybridization using species specific cDNA probes.
PubMed ID: 7524681
PubMed ID: 8216415
Title: The structure of aggrecan fragments in human synovial fluid. Evidence that aggrecanase mediates cartilage degradation in inflammatory joint disease, joint injury, and osteoarthritis.
PubMed ID: 8216415
PubMed ID: 7827755
Title: Length variation in the keratan sulfate domain of mammalian aggrecan.
PubMed ID: 7827755
PubMed ID: 8611178
Title: Age-related changes in the content of the C-terminal region of aggrecan in human articular cartilage.
PubMed ID: 8611178
DOI: 10.1042/bj3130933
PubMed ID: 2789216
Title: A new epidermal growth factor-like domain in the human core protein for the large cartilage-specific proteoglycan. Evidence for alternative splicing of the domain.
PubMed ID: 2789216
PubMed ID: 16080123
Title: A mutation in the variable repeat region of the aggrecan gene (AGC1) causes a form of spondyloepiphyseal dysplasia associated with severe, premature osteoarthritis.
PubMed ID: 16080123
DOI: 10.1086/444401
PubMed ID: 16335952
Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.
PubMed ID: 16335952
DOI: 10.1021/pr0502065
PubMed ID: 17588949
Title: Interaction of cartilage oligomeric matrix protein/thrombospondin 5 with aggrecan.
PubMed ID: 17588949
PubMed ID: 32337544
Title: An affinity chromatography and glycoproteomics workflow to profile the chondroitin sulfate proteoglycans that interact with malarial VAR2CSA in the placenta and in cancer.
PubMed ID: 32337544
PubMed ID: 36213313
Title: Mass spectrometric analysis of chondroitin sulfate-linked peptides.
PubMed ID: 36213313
PubMed ID: 19110214
Title: A recessive skeletal dysplasia, SEMD aggrecan type, results from a missense mutation affecting the C-type lectin domain of aggrecan.
PubMed ID: 19110214
PubMed ID: 20137779
Title: A missense mutation in the aggrecan C-type lectin domain disrupts extracellular matrix interactions and causes dominant familial osteochondritis dissecans.
PubMed ID: 20137779
Sequence Information:
- Length: 2530
- Mass: 261329
- Checksum: 3C809F6DE829956B
- Sequence:
MTTLLWVFVT LRVITAAVTV ETSDHDNSLS VSIPQPSPLR VLLGTSLTIP CYFIDPMHPV TTAPSTAPLA PRIKWSRVSK EKEVVLLVAT EGRVRVNSAY QDKVSLPNYP AIPSDATLEV QSLRSNDSGV YRCEVMHGIE DSEATLEVVV KGIVFHYRAI STRYTLDFDR AQRACLQNSA IIATPEQLQA AYEDGFHQCD AGWLADQTVR YPIHTPREGC YGDKDEFPGV RTYGIRDTNE TYDVYCFAEE MEGEVFYATS PEKFTFQEAA NECRRLGARL ATTGQLYLAW QAGMDMCSAG WLADRSVRYP ISKARPNCGG NLLGVRTVYV HANQTGYPDP SSRYDAICYT GEDFVDIPEN FFGVGGEEDI TVQTVTWPDM ELPLPRNITE GEARGSVILT VKPIFEVSPS PLEPEEPFTF APEIGATAFA EVENETGEAT RPWGFPTPGL GPATAFTSED LVVQVTAVPG QPHLPGGVVF HYRPGPTRYS LTFEEAQQAC LRTGAVIASP EQLQAAYEAG YEQCDAGWLR DQTVRYPIVS PRTPCVGDKD SSPGVRTYGV RPSTETYDVY CFVDRLEGEV FFATRLEQFT FQEALEFCES HNATLATTGQ LYAAWSRGLD KCYAGWLADG SLRYPIVTPR PACGGDKPGV RTVYLYPNQT GLPDPLSRHH AFCFRGISAV PSPGEEEGGT PTSPSGVEEW IVTQVVPGVA AVPVEEETTA VPSGETTAIL EFTTEPENQT EWEPAYTPVG TSPLPGILPT WPPTGAATEE STEGPSATEV PSASEEPSPS EVPFPSEEPS PSEEPFPSVR PFPSVELFPS EEPFPSKEPS PSEEPSASEE PYTPSPPVPS WTELPSSGEE SGAPDVSGDF TGSGDVSGHL DFSGQLSGDR ASGLPSGDLD SSGLTSTVGS GLPVESGLPS GDEERIEWPS TPTVGELPSG AEILEGSASG VGDLSGLPSG EVLETSASGV GDLSGLPSGE VLETTAPGVE DISGLPSGEV LETTAPGVED ISGLPSGEVL ETTAPGVEDI SGLPSGEVLE TTAPGVEDIS GLPSGEVLET TAPGVEDISG LPSGEVLETT APGVEDISGL PSGEVLETAA PGVEDISGLP SGEVLETAAP GVEDISGLPS GEVLETAAPG VEDISGLPSG EVLETAAPGV EDISGLPSGE VLETAAPGVE DISGLPSGEV LETAAPGVED ISGLPSGEVL ETAAPGVEDI SGLPSGEVLE TAAPGVEDIS GLPSGEVLET AAPGVEDISG LPSGEVLETA APGVEDISGL PSGEVLETAA PGVEDISGLP SGEVLETAAP GVEDISGLPS GEVLETAAPG VEDISGLPSG EVLETAAPGV EDISGLPSGE VLETAAPGVE DISGLPSGEV LETAAPGVED ISGLPSGEVL ETTAPGVEEI SGLPSGEVLE TTAPGVDEIS GLPSGEVLET TAPGVEEISG LPSGEVLETS TSAVGDLSGL PSGGEVLEIS VSGVEDISGL PSGEVVETSA SGIEDVSELP SGEGLETSAS GVEDLSRLPS GEEVLEISAS GFGDLSGLPS GGEGLETSAS EVGTDLSGLP SGREGLETSA SGAEDLSGLP SGKEDLVGSA SGDLDLGKLP SGTLGSGQAP ETSGLPSGFS GEYSGVDLGS GPPSGLPDFS GLPSGFPTVS LVDSTLVEVV TASTASELEG RGTIGISGAG EISGLPSSEL DISGRASGLP SGTELSGQAS GSPDVSGEIP GLFGVSGQPS GFPDTSGETS GVTELSGLSS GQPGISGEAS GVLYGTSQPF GITDLSGETS GVPDLSGQPS GLPGFSGATS GVPDLVSGTT SGSGESSGIT FVDTSLVEVA PTTFKEEEGL GSVELSGLPS GEADLSGKSG MVDVSGQFSG TVDSSGFTSQ TPEFSGLPSG IAEVSGESSR AEIGSSLPSG AYYGSGTPSS FPTVSLVDRT LVESVTQAPT AQEAGEGPSG ILELSGAHSG APDMSGEHSG FLDLSGLQSG LIEPSGEPPG TPYFSGDFAS TTNVSGESSV AMGTSGEASG LPEVTLITSE FVEGVTEPTI SQELGQRPPV THTPQLFESS GKVSTAGDIS GATPVLPGSG VEVSSVPESS SETSAYPEAG FGASAAPEAS REDSGSPDLS ETTSAFHEAN LERSSGLGVS GSTLTFQEGE ASAAPEVSGE STTTSDVGTE APGLPSATPT ASGDRTEISG DLSGHTSQLG VVISTSIPES EWTQQTQRPA ETHLEIESSS LLYSGEETHT VETATSPTDA SIPASPEWKR ESESTAAAPA RSCAEEPCGA GTCKETEGHV ICLCPPGYTG EHCNIDQEVC EEGWNKYQGH CYRHFPDRET WVDAERRCRE QQSHLSSIVT PEEQEFVNNN AQDYQWIGLN DRTIEGDFRW SDGHPMQFEN WRPNQPDNFF AAGEDCVVMI WHEKGEWNDV PCNYHLPFTC KKGTVACGEP PVVEHARTFG QKKDRYEINS LVRYQCTEGF VQRHMPTIRC QPSGHWEEPQ ITCTDPTTYK RRLQKRSSRH PRRSRPSTAH
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.