Details for: ABAT
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: skeletal muscle satellite stem cell (CL0008011)
CSI Score: 11.1 - Cell Name: type B pancreatic cell (CL0000169)
CSI Score: 7.8 - Cell Name: hepatocyte (CL0000182)
CSI Score: 7.0 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
CSI Score: 7.0 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
CSI Score: 6.4 - Cell Name: conjunctival epithelial cell (CL1000432)
CSI Score: 6.2 - Cell Name: astrocyte (CL0000127)
CSI Score: 5.9 - Cell Name: amacrine cell (CL0000561)
CSI Score: 5.8 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
CSI Score: 5.6 - Cell Name: oligodendrocyte precursor cell (CL0002453)
CSI Score: 5.5 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
CSI Score: 5.3 - Cell Name: GABAergic neuron (CL0000617)
CSI Score: 5.2 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
CSI Score: 5.1 - Cell Name: pancreatic acinar cell (CL0002064)
CSI Score: 4.9 - Cell Name: corneal epithelial cell (CL0000575)
CSI Score: 4.8 - Cell Name: macroglial cell (CL0000126)
CSI Score: 4.7 - Cell Name: glutamatergic neuron (CL0000679)
CSI Score: 4.7 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
CSI Score: 4.6 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
CSI Score: 4.5 - Cell Name: oligodendrocyte (CL0000128)
CSI Score: 4.4 - Cell Name: inhibitory interneuron (CL0000498)
CSI Score: 4.4 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
CSI Score: 4.4 - Cell Name: pancreatic A cell (CL0000171)
CSI Score: 4.3 - Cell Name: Mueller cell (CL0000636)
CSI Score: 4.3 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
CSI Score: 4.2 - Cell Name: luminal cell of prostate epithelium (CL0002340)
CSI Score: 4.0 - Cell Name: lung ciliated cell (CL1000271)
CSI Score: 4.0 - Cell Name: retinal ganglion cell (CL0000740)
CSI Score: 3.9 - Cell Name: forebrain radial glial cell (CL0013000)
CSI Score: 3.8 - Cell Name: epithelial cell of proximal tubule (CL0002306)
CSI Score: 3.8 - Cell Name: OFF-bipolar cell (CL0000750)
CSI Score: 3.8 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
CSI Score: 3.7 - Cell Name: neuron (CL0000540)
CSI Score: 3.3 - Cell Name: ON-bipolar cell (CL0000749)
CSI Score: 3.3 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
CSI Score: 3.2 - Cell Name: peripheral nervous system neuron (CL2000032)
CSI Score: 3.2 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
CSI Score: 3.1 - Cell Name: myeloid cell (CL0000763)
CSI Score: 3.0 - Cell Name: neural progenitor cell (CL0011020)
CSI Score: 3.0 - Cell Name: mononuclear phagocyte (CL0000113)
CSI Score: 2.9 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
CSI Score: 2.8 - Cell Name: neuroblast (sensu Nematoda and Protostomia) (CL0000338)
CSI Score: 2.8 - Cell Name: glioblast (CL0000030)
CSI Score: 2.8 - Cell Name: ciliated cell (CL0000064)
CSI Score: 2.7 - Cell Name: cardiac muscle cell (CL0000746)
CSI Score: 2.6 - Cell Name: L4 intratelencephalic projecting glutamatergic neuron (CL4030063)
CSI Score: 2.6 - Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
CSI Score: 2.6 - Cell Name: squamous epithelial cell (CL0000076)
CSI Score: 2.5 - Cell Name: stem cell (CL0000034)
CSI Score: 2.5 - Cell Name: malignant cell (CL0001064)
CSI Score: 2.5 - Cell Name: pancreatic ductal cell (CL0002079)
CSI Score: 2.4 - Cell Name: mesenchymal cell (CL0008019)
CSI Score: 2.4 - Cell Name: goblet cell (CL0000160)
CSI Score: 2.4 - Cell Name: enterocyte (CL0000584)
CSI Score: 2.3 - Cell Name: basal cell (CL0000646)
CSI Score: 2.3 - Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
CSI Score: 2.2 - Cell Name: colon epithelial cell (CL0011108)
CSI Score: 2.2 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
CSI Score: 2.2 - Cell Name: glial cell (CL0000125)
CSI Score: 2.2 - Cell Name: epithelial cell (CL0000066)
CSI Score: 2.1 - Cell Name: central nervous system macrophage (CL0000878)
CSI Score: 2.1 - Cell Name: alveolar macrophage (CL0000583)
CSI Score: 2.1 - Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
CSI Score: 2.1 - Cell Name: helper T cell (CL0000912)
CSI Score: 2.0 - Cell Name: fibroblast of cardiac tissue (CL0002548)
CSI Score: 2.0 - Cell Name: T cell (CL0000084)
CSI Score: 2.0 - Cell Name: retina horizontal cell (CL0000745)
CSI Score: 1.9 - Cell Name: cardiac endothelial cell (CL0010008)
CSI Score: 1.9 - Cell Name: thymocyte (CL0000893)
CSI Score: 1.9 - Cell Name: interneuron (CL0000099)
CSI Score: 1.9 - Cell Name: skeletal muscle satellite cell (CL0000594)
CSI Score: 1.8 - Cell Name: microglial cell (CL0000129)
CSI Score: 1.8 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
CSI Score: 1.8 - Cell Name: regular ventricular cardiac myocyte (CL0002131)
CSI Score: 1.7 - Cell Name: obsolete animal cell (CL0000548)
CSI Score: 1.6 - Cell Name: ciliated epithelial cell (CL0000067)
CSI Score: 1.6 - Cell Name: endothelial cell of vascular tree (CL0002139)
CSI Score: 1.5 - Cell Name: common lymphoid progenitor (CL0000051)
CSI Score: 1.5 - Cell Name: retinal rod cell (CL0000604)
CSI Score: 1.5 - Cell Name: macrophage (CL0000235)
CSI Score: 1.5 - Cell Name: secretory cell (CL0000151)
CSI Score: 1.5 - Cell Name: pancreatic D cell (CL0000173)
CSI Score: 1.4 - Cell Name: mature NK T cell (CL0000814)
CSI Score: 1.4 - Cell Name: retinal bipolar neuron (CL0000748)
CSI Score: 1.4 - Cell Name: stromal cell (CL0000499)
CSI Score: 1.4 - Cell Name: CD8-positive, alpha-beta T cell (CL0000625)
CSI Score: 1.4 - Cell Name: rod bipolar cell (CL0000751)
CSI Score: 1.4 - Cell Name: effector CD4-positive, alpha-beta T cell (CL0001044)
CSI Score: 1.3 - Cell Name: intestinal epithelial cell (CL0002563)
CSI Score: 1.3 - Cell Name: myeloid leukocyte (CL0000766)
CSI Score: 1.2 - Cell Name: type I NK T cell (CL0000921)
CSI Score: 1.2 - Cell Name: kidney proximal convoluted tubule epithelial cell (CL1000838)
CSI Score: 1.0 - Cell Name: mesenchymal stem cell (CL0000134)
CSI Score: 1.0 - Cell Name: exhausted T cell (CL0011025)
CSI Score: 1.0 - Cell Name: CD16-positive, CD56-dim natural killer cell, human (CL0000939)
CSI Score: 0.9 - Cell Name: CD4-positive, alpha-beta T cell (CL0000624)
CSI Score: 0.9 - Cell Name: CD8-positive, alpha-beta memory T cell (CL0000909)
CSI Score: 0.9 - Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
CSI Score: 0.9 - Cell Name: melanocyte (CL0000148)
CSI Score: 0.9 - Cell Name: regular atrial cardiac myocyte (CL0002129)
CSI Score: 0.8
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3750774859
Symbol: GABT_HUMAN
Name: 4-aminobutyrate aminotransferase, mitochondrial
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7721088
Title: Screening and sequence determination of a cDNA encoding the human brain 4-aminobutyrate aminotransferase.
PubMed ID: 7721088
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 7851425
Title: Primary structure and tissue distribution of human 4-aminobutyrate aminotransferase.
PubMed ID: 7851425
PubMed ID: 15528998
Title: Cysteine-321 of human brain GABA transaminase is involved in intersubunit cross-linking.
PubMed ID: 15528998
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 10407778
Title: 4-aminobutyrate aminotransferase (GABA-transaminase) deficiency.
PubMed ID: 10407778
Sequence Information:
- Length: 500
- Mass: 56439
- Checksum: F990B0B6B77BD3F5
- Sequence:
MASMLLAQRL ACSFQHSYRL LVPGSRHISQ AAAKVDVEFD YDGPLMKTEV PGPRSQELMK QLNIIQNAEA VHFFCNYEES RGNYLVDVDG NRMLDLYSQI SSVPIGYSHP ALLKLIQQPQ NASMFVNRPA LGILPPENFV EKLRQSLLSV APKGMSQLIT MACGSCSNEN ALKTIFMWYR SKERGQRGFS QEELETCMIN QAPGCPDYSI LSFMGAFHGR TMGCLATTHS KAIHKIDIPS FDWPIAPFPR LKYPLEEFVK ENQQEEARCL EEVEDLIVKY RKKKKTVAGI IVEPIQSEGG DNHASDDFFR KLRDIARKHG CAFLVDEVQT GGGCTGKFWA HEHWGLDDPA DVMTFSKKMM TGGFFHKEEF RPNAPYRIFN TWLGDPSKNL LLAEVINIIK REDLLNNAAH AGKALLTGLL DLQARYPQFI SRVRGRGTFC SFDTPDDSIR NKLILIARNK GVVLGGCGDK SIRFRPTLVF RDHHAHLFLN IFSDILADFK
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.