Details for: Nrl

Gene ID: 18185

Symbol: Nrl

Ensembl ID: ENSMUSG00000040632

Description: neural retina leucine zipper gene

Associated with

  • Cytoplasm
    (GO:0005737)
  • Cytosol
    (GO:0005829)
  • Dna-binding transcription activator activity, rna polymerase ii-specific
    (GO:0001228)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Leucine zipper domain binding
    (GO:0043522)
  • Multicellular organism development
    (GO:0007275)
  • Nucleoplasm
    (GO:0005654)
  • Nucleus
    (GO:0005634)
  • Positive regulation of gene expression
    (GO:0010628)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Promoter-specific chromatin binding
    (GO:1990841)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Retinal rod cell development
    (GO:0046548)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Sequence-specific double-stranded dna binding
    (GO:1990837)

Other Information

Genular Protein ID: 2128312970

Symbol: NRL_MOUSE

Name: Neural retina-specific leucine zipper protein

UniProtKB Accession Codes:

P54846

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CCDS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 Ensembl 3 ExpressionAtlas 1 GO 16 Gene3D 1 GeneTree 1 Genevisible 1 HOGENOM 1 InParanoid 1 InterPro 6 KEGG 1 MGI 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIR 1 PRO 1 PROSITE 1 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 1 RNAct 1 RefSeq 4 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 2 TreeFam 1 UCSC 1 UniProtKB 1 VEuPathDB 1 eggNOG 1 iPTMnet 1

Citations:

PubMed ID: 8288222

Title: Molecular characterization of the murine neural retina leucine zipper gene, Nrl.

PubMed ID: 8288222

DOI: 10.1006/geno.1993.1458

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11477108

Title: Multiple phosphorylated isoforms of NRL are expressed in rod photoreceptors.

PubMed ID: 11477108

DOI: 10.1074/jbc.m105855200

PubMed ID: 20551322

Title: Sumoylation of bZIP transcription factor NRL modulates target gene expression during photoreceptor differentiation.

PubMed ID: 20551322

DOI: 10.1074/jbc.m110.142810

Sequence Information:

  • Length: 237
  • Mass: 26083
  • Checksum: AF1A2B3772C95EC8
  • Sequence:
    • MAFPPSPLAM EYVNDFDLMK FEIKREPSEG RSGVPTASLG STPYSSVPPS PTFSEPGMVG 
GGEAPRPGLE ELYWLATLQQ QLGSDEVLGL SPDEAVELLQ NQGPVSMEGP LGYYSGSPGE 
TGAQHVQLPE RFSDAALVSM SVRELNRQLR GCGRDEALRL KQRRRTLKNR GYAQACRSKR 
LQQRRGLEAE RARLAAQLDA LRAEVARLAR ERDLYKARCD RLTSGGPGSD DHTHLFL

Genular Protein ID: 2980679448

Symbol: Q8C8Y1_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q8C8Y1

Database IDs:

AGR 1 ARBA 6 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 GO 4 Gene3D 1 InterPro 6 KEGG 1 MGI 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 Pfam 2 RefSeq 3 SAM 2 SMART 1 SUPFAM 2

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

  • Length: 237
  • Mass: 26139
  • Checksum: 19C14685188D4C58
  • Sequence:
    • MVFPPSPLAM EYVNDFDLMK FEIKREPSEG RSGVPTASLG STPYSSVPPS PTFSEPGMVG 
GGEAPRPGLE ELYWLATLQQ QLGSDEVLGL SPDEAVELLQ NQGPVSMEGP LGYYSGSPGE 
TGAQHVQLPE RFSDAALVSM SVRELNRQLR GCGRDEALRL KQRRRTLKNR GYAQACRSKR 
LQQRRGLEAE RARLAAQLDA LRAEVARLAR ERDLYRARCD RLTSGGPGSD DHTHLFL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.