Details for: AGXT
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: oligodendrocyte precursor cell (CL0002453)
Fold Change: 6.69
Marker Score: 8,279 - Cell Name: microglial cell (CL0000129)
Fold Change: 3.76
Marker Score: 6,845 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: 3.52
Marker Score: 18,908 - Cell Name: hepatoblast (CL0005026)
Fold Change: 3.04
Marker Score: 9,960 - Cell Name: double negative thymocyte (CL0002489)
Fold Change: 2.94
Marker Score: 4,063 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 2.33
Marker Score: 14,966 - Cell Name: midzonal region hepatocyte (CL0019028)
Fold Change: 2.33
Marker Score: 10,043 - Cell Name: endothelial cell of pericentral hepatic sinusoid (CL0019022)
Fold Change: 1.84
Marker Score: 1,975 - Cell Name: inflammatory macrophage (CL0000863)
Fold Change: 1.65
Marker Score: 513 - Cell Name: kidney proximal convoluted tubule epithelial cell (CL1000838)
Fold Change: 1.51
Marker Score: 3,134 - Cell Name: hepatocyte (CL0000182)
Fold Change: 1.33
Marker Score: 909 - Cell Name: megakaryocyte-erythroid progenitor cell (CL0000050)
Fold Change: 1.33
Marker Score: 554 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.3
Marker Score: 942 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 1.28
Marker Score: 2,424 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: 1.13
Marker Score: 1,200 - Cell Name: pericyte (CL0000669)
Fold Change: 1.1
Marker Score: 644 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 1.08
Marker Score: 2,537 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 1.05
Marker Score: 6,363 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 1.04
Marker Score: 706 - Cell Name: precursor B cell (CL0000817)
Fold Change: 1
Marker Score: 664 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71,833 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 48,059 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 1
Marker Score: 513 - Cell Name: endothelial cell of periportal hepatic sinusoid (CL0019021)
Fold Change: 0.99
Marker Score: 273 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.99
Marker Score: 466 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30,408 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.95
Marker Score: 2,412 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.94
Marker Score: 5,342 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.92
Marker Score: 2,742 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.91
Marker Score: 329 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.86
Marker Score: 344 - Cell Name: mast cell (CL0000097)
Fold Change: 0.86
Marker Score: 496 - Cell Name: erythrocyte (CL0000232)
Fold Change: 0.85
Marker Score: 471 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.78
Marker Score: 1,265 - Cell Name: brush cell (CL0002204)
Fold Change: 0.78
Marker Score: 708 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.77
Marker Score: 400 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.73
Marker Score: 3,055 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.72
Marker Score: 11,329 - Cell Name: blood vessel endothelial cell (CL0000071)
Fold Change: 0.69
Marker Score: 695 - Cell Name: B cell (CL0000236)
Fold Change: 0.67
Marker Score: 636 - Cell Name: hepatic stellate cell (CL0000632)
Fold Change: 0.66
Marker Score: 250 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.66
Marker Score: 422 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.62
Marker Score: 495 - Cell Name: neuroendocrine cell (CL0000165)
Fold Change: 0.59
Marker Score: 231 - Cell Name: Kupffer cell (CL0000091)
Fold Change: 0.57
Marker Score: 569 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: 0.56
Marker Score: 176 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.56
Marker Score: 334 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 0.53
Marker Score: 1,081 - Cell Name: myeloid cell (CL0000763)
Fold Change: 0.51
Marker Score: 816 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.51
Marker Score: 3,051 - Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
Fold Change: 0.49
Marker Score: 107 - Cell Name: cholangiocyte (CL1000488)
Fold Change: 0.49
Marker Score: 182 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 0.47
Marker Score: 280 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: 0.46
Marker Score: 202 - Cell Name: epithelial cell of proximal tubule (CL0002306)
Fold Change: 0.43
Marker Score: 1,541 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: 0.39
Marker Score: 388 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: 0.38
Marker Score: 370 - Cell Name: plasma cell (CL0000786)
Fold Change: 0.37
Marker Score: 418 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
Fold Change: 0.34
Marker Score: 599 - Cell Name: erythroblast (CL0000765)
Fold Change: 0.33
Marker Score: 206 - Cell Name: CD8-positive, alpha-beta T cell (CL0000625)
Fold Change: 0.32
Marker Score: 513 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.31
Marker Score: 148 - Cell Name: alpha-beta T cell (CL0000789)
Fold Change: 0.24
Marker Score: 183 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: 0.23
Marker Score: 66 - Cell Name: neuronal receptor cell (CL0000006)
Fold Change: 0.22
Marker Score: 99 - Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 0.22
Marker Score: 195 - Cell Name: squamous epithelial cell (CL0000076)
Fold Change: 0.22
Marker Score: 148 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.21
Marker Score: 70 - Cell Name: endothelial cell (CL0000115)
Fold Change: 0.2
Marker Score: 180 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.2
Marker Score: 90 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.19
Marker Score: 146 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 0.19
Marker Score: 196 - Cell Name: renal alpha-intercalated cell (CL0005011)
Fold Change: 0.19
Marker Score: 98 - Cell Name: mucosal invariant T cell (CL0000940)
Fold Change: 0.17
Marker Score: 155 - Cell Name: innate lymphoid cell (CL0001065)
Fold Change: 0.17
Marker Score: 61 - Cell Name: goblet cell (CL0000160)
Fold Change: 0.16
Marker Score: 1,081 - Cell Name: intestine goblet cell (CL0019031)
Fold Change: 0.16
Marker Score: 153 - Cell Name: kidney capillary endothelial cell (CL1000892)
Fold Change: 0.16
Marker Score: 49 - Cell Name: renal beta-intercalated cell (CL0002201)
Fold Change: 0.15
Marker Score: 48 - Cell Name: dendritic cell (CL0000451)
Fold Change: 0.15
Marker Score: 103 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.14
Marker Score: 35 - Cell Name: fibroblast (CL0000057)
Fold Change: 0.14
Marker Score: 131 - Cell Name: gamma-delta T cell (CL0000798)
Fold Change: 0.13
Marker Score: 89 - Cell Name: hematopoietic stem cell (CL0000037)
Fold Change: 0.12
Marker Score: 63 - Cell Name: smooth muscle cell (CL0000192)
Fold Change: 0.11
Marker Score: 74 - Cell Name: mature NK T cell (CL0000814)
Fold Change: 0.11
Marker Score: 50 - Cell Name: connective tissue cell (CL0002320)
Fold Change: 0.11
Marker Score: 28 - Cell Name: stem cell (CL0000034)
Fold Change: 0.11
Marker Score: 254 - Cell Name: natural killer cell (CL0000623)
Fold Change: 0.1
Marker Score: 136 - Cell Name: plasmacytoid dendritic cell (CL0000784)
Fold Change: 0.1
Marker Score: 56 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.1
Marker Score: 40 - Cell Name: enterocyte (CL0000584)
Fold Change: 0.09
Marker Score: 435 - Cell Name: enterocyte of colon (CL1000347)
Fold Change: 0.09
Marker Score: 139 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.09
Marker Score: 29 - Cell Name: leukocyte (CL0000738)
Fold Change: 0.09
Marker Score: 51 - Cell Name: skeletal muscle satellite cell (CL0000594)
Fold Change: 0.09
Marker Score: 59 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 0.08
Marker Score: 2,707 - Cell Name: colon epithelial cell (CL0011108)
Fold Change: 0.08
Marker Score: 248 - Cell Name: endothelial cell of lymphatic vessel (CL0002138)
Fold Change: 0.08
Marker Score: 47 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.07
Marker Score: 74
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1927770238
Symbol: AGT1_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 2253628
Title: Cloning and nucleotide sequence of cDNA encoding human liver serine-pyruvate aminotransferase.
PubMed ID: 2253628
PubMed ID: 1703535
Title: Identification of mutations associated with peroxisome-to-mitochondrion mistargeting of alanine/glyoxylate aminotransferase in primary hyperoxaluria type 1.
PubMed ID: 1703535
PubMed ID: 2363689
Title: Human peroxisomal L-alanine: glyoxylate aminotransferase. Evolutionary loss of a mitochondrial targeting signal by point mutation of the initiation codon.
PubMed ID: 2363689
DOI: 10.1042/bj2680517
PubMed ID: 2045108
Title: Characterization and chromosomal mapping of a genomic clone encoding human alanine:glyoxylate aminotransferase.
PubMed ID: 2045108
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15815621
Title: Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
PubMed ID: 15815621
DOI: 10.1038/nature03466
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10347152
Title: Flux of the L-serine metabolism in rabbit, human, and dog livers. Substantial contributions of both mitochondrial and peroxisomal serine:pyruvate/alanine:glyoxylate aminotransferase.
PubMed ID: 10347152
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 12899834
Title: Crystal structure of alanine:glyoxylate aminotransferase and the relationship between genotype and enzymatic phenotype in primary hyperoxaluria type 1.
PubMed ID: 12899834
PubMed ID: 2039493
Title: Primary hyperoxaluria type I due to a point mutation of T to C in the coding region of the serine:pyruvate aminotransferase gene.
PubMed ID: 2039493
PubMed ID: 1349575
Title: A glycine-to-glutamate substitution abolishes alanine:glyoxylate aminotransferase catalytic activity in a subset of patients with primary hyperoxaluria type 1.
PubMed ID: 1349575
PubMed ID: 1301173
Title: A serine-to-phenylalanine substitution leads to loss of alanine:glyoxylate aminotransferase catalytic activity and immunoreactivity in a patient with primary hyperoxaluria type 1.
PubMed ID: 1301173
DOI: 10.1093/hmg/1.8.643
PubMed ID: 8101040
Title: Enzymological and mutational analysis of a complex primary hyperoxaluria type 1 phenotype involving alanine:glyoxylate aminotransferase peroxisome-to-mitochondrion mistargeting and intraperoxisomal aggregation.
PubMed ID: 8101040
PubMed ID: 8507692
Title: Primary hyperoxaluria type 1 and peroxisome-to-mitochondrion mistargeting of alanine:glyoxylate aminotransferase.
PubMed ID: 8507692
PubMed ID: 9192270
Title: Primary hyperoxaluria type 1: a cluster of new mutations in exon 7 of the AGXT gene.
PubMed ID: 9192270
DOI: 10.1136/jmg.34.6.489
PubMed ID: 9604803
Title: Identification of new mutations in primary hyperoxaluria type 1 (PH1).
PubMed ID: 9604803
PubMed ID: 10394939
Title: Gene symbol: AGXT. Disease: primary hyperoxaluria type I.
PubMed ID: 10394939
PubMed ID: 10453743
Title: Molecular analysis of hyperoxaluria type 1 in Italian patients reveals eight new mutations in the alanine: glyoxylate aminotransferase gene.
PubMed ID: 10453743
PubMed ID: 10541294
Title: Primary hyperoxaluria type I: a model for multiple mutations in a monogenic disease within a distinct ethnic group.
PubMed ID: 10541294
PubMed ID: 10862087
Title: Identification of 5 novel mutations in the AGXT gene.
PubMed ID: 10862087
DOI: 10.1002/1098-1004(200006)15:6<577::aid-humu9>3.0.co;2-#
PubMed ID: 10960483
Title: Functional synergism between the most common polymorphism in human alanine:glyoxylate aminotransferase and four of the most common disease-causing mutations.
PubMed ID: 10960483
PubMed ID: 12559847
Title: The AGT gene in Africa: a distinctive minor allele haplotype, a polymorphism (V326I), and a novel PH1 mutation (A112D) in Black Africans.
PubMed ID: 12559847
PubMed ID: 12777626
Title: Primary hyperoxaluria type 1 in the Canary Islands: a conformational disease due to I244T mutation in the P11L-containing alanine:glyoxylate aminotransferase.
PubMed ID: 12777626
PubMed ID: 15253729
Title: Clinical implications of mutation analysis in primary hyperoxaluria type 1.
PubMed ID: 15253729
PubMed ID: 15849466
Title: Implications of genotype and enzyme phenotype in pyridoxine response of patients with type I primary hyperoxaluria.
PubMed ID: 15849466
DOI: 10.1159/000085411
PubMed ID: 15961946
Title: Intra-familial clinical heterogeneity: absence of genotype-phenotype correlation in primary hyperoxaluria type 1 in Israel.
PubMed ID: 15961946
DOI: 10.1159/000086357
PubMed ID: 15963748
Title: The major allele of the alanine:glyoxylate aminotransferase gene: nine novel mutations and polymorphisms associated with primary hyperoxaluria type 1.
PubMed ID: 15963748
PubMed ID: 16971151
Title: Consequences of missense mutations for dimerization and turnover of alanine:glyoxylate aminotransferase: study of a spectrum of mutations.
PubMed ID: 16971151
PubMed ID: 17495019
Title: Selected exonic sequencing of the AGXT gene provides a genetic diagnosis in 50% of patients with primary hyperoxaluria type 1.
PubMed ID: 17495019
PubMed ID: 24055001
Title: Gly161 mutations associated with primary hyperoxaluria type I induce the cytosolic aggregation and the intracellular degradation of the apo-form of alanine:glyoxylate aminotransferase.
PubMed ID: 24055001
PubMed ID: 23229545
Title: Four of the most common mutations in primary hyperoxaluria type 1 unmask the cryptic mitochondrial targeting sequence of alanine:glyoxylate aminotransferase encoded by the polymorphic minor allele.
PubMed ID: 23229545
PubMed ID: 24934730
Title: Mutational analysis of AGXT in two Chinese families with primary hyperoxaluria type 1.
PubMed ID: 24934730
PubMed ID: 26149463
Title: Misfolding caused by the pathogenic mutation G47R on the minor allele of alanine:glyoxylate aminotransferase and chaperoning activity of pyridoxine.
PubMed ID: 26149463
Sequence Information:
- Length: 392
- Mass: 43010
- Checksum: 2987DDE85B2470B4
- Sequence:
MASHKLLVTP PKALLKPLSI PNQLLLGPGP SNLPPRIMAA GGLQMIGSMS KDMYQIMDEI KEGIQYVFQT RNPLTLVISG SGHCALEAAL VNVLEPGDSF LVGANGIWGQ RAVDIGERIG ARVHPMTKDP GGHYTLQEVE EGLAQHKPVL LFLTHGESST GVLQPLDGFG ELCHRYKCLL LVDSVASLGG TPLYMDRQGI DILYSGSQKA LNAPPGTSLI SFSDKAKKKM YSRKTKPFSF YLDIKWLANF WGCDDQPRMY HHTIPVISLY SLRESLALIA EQGLENSWRQ HREAAAYLHG RLQALGLQLF VKDPALRLPT VTTVAVPAGY DWRDIVSYVI DHFDIEIMGG LGPSTGKVLR IGLLGCNATR ENVDRVTEAL RAALQHCPKK KL
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.