Details for: Ptbp1

Gene ID: 19205

Symbol: Ptbp1

Ensembl ID: ENSMUSG00000006498

Description: polypyrimidine tract binding protein 1

Associated with

Other Information

Genular Protein ID: 1405266925

Symbol: PTBP1_MOUSE

Name: Polypyrimidine tract-binding protein 1

UniProtKB Accession Codes:

P17225 Q8BGJ5 Q922I7

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 BMRB 1 Bgee 1 BioGRID-ORCS 1 CCDS 2 CDD 3 CORUM 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 19 EPD 1 Ensembl 2 GO 31 Gene3D 1 GeneTree 1 GlyGen 1 InParanoid 1 IntAct 1 InterPro 7 KEGG 1 MGI 1 MINT 1 MaxQB 1 NCBI Taxonomy 1 NCBIfam 1 OMA 1 OrthoDB 1 PANTHER 2 PRO 1 PROSITE 1 PROSITE-ProRule 1 PaxDb 1 PeptideAtlas 1 Pfam 3 PhosphoSitePlus 1 Proteomes 2 ProteomicsDB 3 Pumba 1 RNAct 1 Reactome 3 RefSeq 2 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 SwissPalm 1 TreeFam 1 UniProtKB 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1

Citations:

PubMed ID: 1722210

Title: Murine polypyrimidine tract binding protein. Purification, cloning, and mapping of the RNA binding domain.

PubMed ID: 1722210

DOI: 10.1016/s0021-9258(18)54280-0

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11724819

Title: Raver1, a dual compartment protein, is a ligand for PTB/hnRNPI and microfilament attachment proteins.

PubMed ID: 11724819

DOI: 10.1083/jcb.200105044

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

PubMed ID: 21518792

Title: RBM4 down-regulates PTB and antagonizes its activity in muscle cell-specific alternative splicing.

PubMed ID: 21518792

DOI: 10.1083/jcb.201007131

Sequence Information:

  • Length: 555
  • Mass: 59322
  • Checksum: 51504B8500F2477F
  • Sequence:
    • MDGIVPDIAV GTKRGSDELF STCVSNGPFI MSSSASAANG NDSKKFKGDN RSAGVPSRVI 
HVRKLPSDVT EGEVISLGLP FGKVTNLLML KGKNQAFIEM NTEEAANTMV NYYTSVAPVL 
RGQPIYIQFS NHKELKTDSS PNQARAQAAL QAVNSVQSGN LALAASAAAV DAGMAMAGQS 
PVLRIIVENL FYPVTLDVLH QIFSKFGTVL KIITFTKNNQ FQALLQYADP VSAQHAKLSL 
DGQNIYNACC TLRIDFSKLT SLNVKYNNDK SRDYTRPDLP SGDSQPSLDQ TMAAAFGAPG 
IMSASPYAGA GFPPTFAIPQ AAGLSVPNVH GALAPLAIPS AAAAAAASRI AIPGLAGAGN 
SVLLVSNLNP ERVTPQSLFI LFGVYGDVQR VKILFNKKEN ALVQMADGSQ AQLAMSHLNG 
HKLHGKSVRI TLSKHQSVQL PREGQEDQGL TKDYGSSPLH RFKKPGSKNF QNIFPPSATL 
HLSNIPPSVS EDDLKSLFSS NGGVVKGFKF FQKDRKMALI QMGSVEEAVQ ALIELHNHDL 
GENHHLRVSF SKSTI

Genular Protein ID: 2373271064

Symbol: Q8CB58_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q8CB58

Database IDs:

AGR 1 ARBA 3 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 2 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EPD 1 Ensembl 2 ExpressionAtlas 1 GO 3 Gene3D 1 GeneTree 1 HOGENOM 1 InterPro 6 MGI 2 MaxQB 1 NCBI Taxonomy 1 NCBIfam 1 OrthoDB 1 PANTHER 2 PROSITE 2 PROSITE-ProRule 1 Pfam 3 Proteomes 2 ProteomicsDB 1 RefSeq 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 SwissPalm 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

PubMed ID: 23806337

Title: SIRT5-mediated lysine desuccinylation impacts diverse metabolic pathways.

PubMed ID: 23806337

DOI: 10.1016/j.molcel.2013.06.001

Sequence Information:

  • Length: 489
  • Mass: 52631
  • Checksum: 73412E3F847B763D
  • Sequence:
    • MDGIVPDIAV GTKRGSDELF STCVSNGPFI MSSSASAGLP FGKVTNLLML KGKNQAFIEM 
NTEEAANTMV NYYTSVAPVL RGQPIYIQFS NHKELKTDSS PNQARAQAAL QAVNSVQSGN 
LALAASAAAV DAGMAMAGQS PVLRIIVENL FYPVTLDVLH QIFSKFGTVL KIITFTKNNQ 
FQALLQYADP VSAQHAKLSL DGQNIYNACC TLRIDFSKLT SLNVKYNNDK SRDYTRPDLP 
SGDSQPSLDQ TMAAAFGLSV PNVHGALAPL AIPSAAAAAA ASRIAIPGLA GAGNSVLLVS 
NLNPERVTPQ SLFILFGVYG DVQRVKILFN KKENALVQMA DGSQAQLAMS HLNGHKLHGK 
SVRITLSKHQ SVQLPREGQE DQGLTKDYGS SPLHRFKKPG SKNFQNIFPP SATLHLSNIP 
PSVSEDDLKS LFSSNGGVVK GFKFFQKDRK MALIQMGSVE EAVQALIELH NHDLGENHHL 
RVSFSKSTI

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.