Genular: Defining Cellular Identity and Function

Details for: Rps16

Gene ID: 20055

Symbol: Rps16

Ensembl ID: ENSMUSG00000037563

Description: ribosomal protein S16

Associated with

Activation of the mrna upon binding of the cap-binding complex and eifs, and subsequent binding to 43s
(R-MMU-72662)
Cap-dependent translation initiation
(R-MMU-72737)
Eukaryotic translation initiation
(R-MMU-72613)
Formation of a pool of free 40s subunits
(R-MMU-72689)
Formation of the ternary complex, and subsequently, the 43s complex
(R-MMU-72695)
Gtp hydrolysis and joining of the 60s ribosomal subunit
(R-MMU-72706)
L13a-mediated translational silencing of ceruloplasmin expression
(R-MMU-156827)
Major pathway of rrna processing in the nucleolus and cytosol
(R-MMU-6791226)
Metabolism of proteins
(R-MMU-392499)
Metabolism of rna
(R-MMU-8953854)
Nonsense-mediated decay (nmd)
(R-MMU-927802)
Nonsense mediated decay (nmd) enhanced by the exon junction complex (ejc)
(R-MMU-975957)
Nonsense mediated decay (nmd) independent of the exon junction complex (ejc)
(R-MMU-975956)
Ribosomal scanning and start codon recognition
(R-MMU-72702)
Rrna processing in the nucleus and cytosol
(R-MMU-8868773)
Srp-dependent cotranslational protein targeting to membrane
(R-MMU-1799339)
Translation initiation complex formation
(R-MMU-72649)
Cellular response to leukemia inhibitory factor
(GO:1990830)
Cytoplasm
(GO:0005737)
Cytoplasmic translation
(GO:0002181)
Cytosol
(GO:0005829)
Cytosolic ribosome
(GO:0022626)
Cytosolic small ribosomal subunit
(GO:0022627)
Maturation of ssu-rrna from tricistronic rrna transcript (ssu-rrna, 5.8s rrna, lsu-rrna)
(GO:0000462)
Nucleus
(GO:0005634)
Postsynapse
(GO:0098794)
Presynapse
(GO:0098793)
Ribonucleoprotein complex
(GO:1990904)
Ribosomal small subunit biogenesis
(GO:0042274)
Ribosome
(GO:0005840)
Rna binding
(GO:0003723)
Rrna processing
(GO:0006364)
Small-subunit processome
(GO:0032040)
Structural constituent of ribosome
(GO:0003735)
Synapse
(GO:0045202)
Translation
(GO:0006412)
Translation at postsynapse
(GO:0140242)
Translation at presynapse
(GO:0140236)

Other Information

Proteins

40S ribosomal protein S16
Q5CZY9_MOUSE

Genular Protein ID: 2417064999

Symbol: RS16_MOUSE

Name: 40S ribosomal protein S16

UniProtKB Accession Codes:

P14131 Q3THM9

Database IDs:

Citations:

PubMed ID: 3915781

Title: Characterization of the multigene family encoding the mouse S16 ribosomal protein: strategy for distinguishing an expressed gene from its processed pseudogene counterparts by an analysis of total genomic DNA.

PubMed ID: 3915781

DOI: 10.1128/mcb.5.12.3560-3576.1985

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

PubMed ID: 36517592

Title: A male germ-cell-specific ribosome controls male fertility.

PubMed ID: 36517592

DOI: 10.1038/s41586-022-05508-0

Sequence Information:

Length: 146
Mass: 16445
Checksum: 519BCFB91BB68A15
Sequence:

MPSKGPLQSV QVFGRKKTAT AVAHCKRGNG LIKVNGRPLE MIEPRTLQYK LLEPVLLLGK 
ERFAGVDIRV RVKGGGHVAQ IYAIRQSISK ALVAYYQKYV DEASKKEIKD ILIQYDRTLL 
VADPRRCESK KFGGPGARAR YQKSYR

Genular Protein ID: 2451678509

Symbol: Q5CZY9_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q5CZY9

Database IDs:

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 34157102

Title: Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA.

PubMed ID: 34157102

DOI: 10.1093/nar/gkab532

Sequence Information:

Length: 172
Mass: 19274
Checksum: 7DD2EFCCF183D184
Sequence:

MLERPLREPF PVAALRGVEL VLVLGAMPSK GPLQSVQVFG RKKTATAVAH CKRGNGLIKV 
NGRPLEMIEP RTLQYKLLEP VLLLGKERFA GVDIRVRVKG GGHVAQIYAI RQSISKALVA 
YYQKYVDEAS KKEIKDILIQ YDRTLLVADP RRCESKKFGG PGARARYQKS YR

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Rps16

Associated with

Other Information

Characterization of the multigene family encoding the mouse S16 ribosomal protein: strategy for distinguishing an expressed gene from its processed pseudogene counterparts by an analysis of total genomic DNA. PubMed ID: 3915781

The transcriptional landscape of the mammalian genome. PubMed ID: 16141072

A tissue-specific atlas of mouse protein phosphorylation and expression. PubMed ID: 21183079

A male germ-cell-specific ribosome controls male fertility. PubMed ID: 36517592

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334