Rps4x | ENSMUSG00000031320 | NCBI 20102

Details for: Rps4x

Gene ID: 20102

Symbol: Rps4x

Ensembl ID: ENSMUSG00000031320

Description: ribosomal protein S4, X-linked

Associated with

Activation of the mrna upon binding of the cap-binding complex and eifs, and subsequent binding to 43s
(R-MMU-72662)
Cap-dependent translation initiation
(R-MMU-72737)
Eukaryotic translation initiation
(R-MMU-72613)
Formation of a pool of free 40s subunits
(R-MMU-72689)
Formation of the ternary complex, and subsequently, the 43s complex
(R-MMU-72695)
Gtp hydrolysis and joining of the 60s ribosomal subunit
(R-MMU-72706)
L13a-mediated translational silencing of ceruloplasmin expression
(R-MMU-156827)
Major pathway of rrna processing in the nucleolus and cytosol
(R-MMU-6791226)
Metabolism of proteins
(R-MMU-392499)
Metabolism of rna
(R-MMU-8953854)
Nonsense-mediated decay (nmd)
(R-MMU-927802)
Nonsense mediated decay (nmd) enhanced by the exon junction complex (ejc)
(R-MMU-975957)
Nonsense mediated decay (nmd) independent of the exon junction complex (ejc)
(R-MMU-975956)
Ribosomal scanning and start codon recognition
(R-MMU-72702)
Rrna processing
(R-MMU-72312)
Rrna processing in the nucleus and cytosol
(R-MMU-8868773)
Srp-dependent cotranslational protein targeting to membrane
(R-MMU-1799339)
Translation initiation complex formation
(R-MMU-72649)
Cytoplasm
(GO:0005737)
Cytoplasmic ribonucleoprotein granule
(GO:0036464)
Cytoplasmic translation
(GO:0002181)
Cytosol
(GO:0005829)
Cytosolic ribosome
(GO:0022626)
Cytosolic small ribosomal subunit
(GO:0022627)
Nucleus
(GO:0005634)
Ribonucleoprotein complex
(GO:1990904)
Ribosome
(GO:0005840)
Rna binding
(GO:0003723)
Rrna binding
(GO:0019843)
Small-subunit processome
(GO:0032040)
Small ribosomal subunit
(GO:0015935)
Structural constituent of ribosome
(GO:0003735)
Synapse
(GO:0045202)
Translation
(GO:0006412)

Other Information

Proteins

40S ribosomal protein S4, X isoform
Q545F8_MOUSE

Genular Protein ID: 380193572

Symbol: RS4X_MOUSE

Name: 40S ribosomal protein S4, X isoform

UniProtKB Accession Codes:

P62702 P12631 P12750 P27576 P55831 Q14727 Q9CXN0

Database IDs:

Citations:

PubMed ID: 1783379

Title: Inactivation of the Rps4 gene on the mouse X chromosome.

PubMed ID: 1783379

DOI: 10.1016/0888-7543(91)90037-f

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 1740345

Title: Rps4 maps near the inactivation center on the mouse X chromosome.

PubMed ID: 1740345

DOI: 10.1016/0888-7543(92)90386-7

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

PubMed ID: 23806337

Title: SIRT5-mediated lysine desuccinylation impacts diverse metabolic pathways.

PubMed ID: 23806337

DOI: 10.1016/j.molcel.2013.06.001

PubMed ID: 36517592

Title: A male germ-cell-specific ribosome controls male fertility.

PubMed ID: 36517592

DOI: 10.1038/s41586-022-05508-0

Sequence Information:

Length: 263
Mass: 29598
Checksum: 87200E545A8958B0
Sequence:

MARGPKKHLK RVAAPKHWML DKLTGVFAPR PSTGPHKLRE CLPLIIFLRN RLKYALTGDE 
VKKICMQRFI KIDGKVRTDI TYPAGFMDVI SIDKTGENFR LIYDTKGRFA VHRITPEEAK 
YKLCKVRKIF VGTKGIPHLV THDARTIRYP DPLIKVNDTI QIDLETGKIT DFIKFDTGNL 
CMVTGGANLG RIGVITNRER HPGSFDVVHV KDANGNSFAT RLSNIFVIGK GNKPWISLPR 
GKGIRLTIAE ERDKRLAAKQ SSG

Genular Protein ID: 1507128639

Symbol: Q545F8_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q545F8

Database IDs:

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

Length: 245
Mass: 27504
Checksum: E3571873850C16BA
Sequence:

MLDKLTGVFA PRPSTGPHKL RECLPLIIFL RNRLKYALTG DEVKKICMQR FIKIDGKVRT 
DITYPAGFMD VISIDKTGEN FRLIYDTKGR FAVHRITPEE AKYKLCKVRK IFVGTKGIPH 
LVTHDARTIR YPDPLIKVND TIQIDLETGK ITDFIKFDTG NLCMVTGGAN LGRIGVITNR 
ERHPGSFDVV HVKDANGNSF ATRLSNIFVI GKGNKPWISL PRGKGIRLTI AEERDKRLAA 
KQSSG

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Rps4x

Associated with

Other Information

Inactivation of the Rps4 gene on the mouse X chromosome. PubMed ID: 1783379

The transcriptional landscape of the mammalian genome. PubMed ID: 16141072

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Rps4 maps near the inactivation center on the mouse X chromosome. PubMed ID: 1740345

A tissue-specific atlas of mouse protein phosphorylation and expression. PubMed ID: 21183079

SIRT5-mediated lysine desuccinylation impacts diverse metabolic pathways. PubMed ID: 23806337

A male germ-cell-specific ribosome controls male fertility. PubMed ID: 36517592

High-efficiency full-length cDNA cloning. PubMed ID: 10349636

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. PubMed ID: 11042159

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. PubMed ID: 11076861

Functional annotation of a full-length mouse cDNA collection. PubMed ID: 11217851

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. PubMed ID: 12466851

Antisense Transcription in the Mammalian Transcriptome. PubMed ID: 16141073