Details for: Rrh

Gene ID: 20132

Symbol: Rrh

Ensembl ID: ENSMUSG00000028012

Description: retinal pigment epithelium derived rhodopsin homolog

Associated with

Other Information

Genular Protein ID: 923365358

Symbol: OPSX_MOUSE

Name: Visual pigment-like receptor peropsin

UniProtKB Accession Codes:

O35214

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CCDS 1 CDD 1 CTD 1 DNASU 1 EMBL 1 Ensembl 2 ExpressionAtlas 1 GO 7 Gene3D 1 GeneTree 1 Genevisible 1 GlyCosmos 1 GlyGen 1 HOGENOM 1 InParanoid 1 InterPro 4 KEGG 1 MGI 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 2 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 1 RNAct 1 Reactome 2 RefSeq 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1

Citations:

PubMed ID: 9275222

Title: Peropsin, a novel visual pigment-like protein located in the apical microvilli of the retinal pigment epithelium.

PubMed ID: 9275222

DOI: 10.1073/pnas.94.18.9893

Sequence Information:

  • Length: 337
  • Mass: 37209
  • Checksum: 353E4E2278EDBFA6
  • Sequence:
    • MLSEASDFNS SGSRSEGSVF SRTEHSVIAA YLIVAGITSI LSNVVVLGIF IKYKELRTPT 
NAVIINLAFT DIGVSSIGYP MSAASDLHGS WKFGHAGCQI YAGLNIFFGM VSIGLLTVVA 
MDRYLTISCP DVGRRMTTNT YLSMILGAWI NGLFWALMPI IGWASYAPDP TGATCTINWR 
NNDTSFVSYT MMVIVVNFIV PLTVMFYCYY HVSRSLRLYA ASDCTAHLHR DWADQADVTK 
MSVIMILMFL LAWSPYSIVC LWACFGNPKK IPPSMAIIAP LFAKSSTFYN PCIYVAAHKK 
FRKAMLAMFK CQPHLAVPEP STLPMDMPQS SLAPVRI

Genular Protein ID: 2182388780

Symbol: Q9D1T9_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q9D1T9

Database IDs:

AGR 1 ARBA 10 AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 2 GO 5 Gene3D 1 Genevisible 1 InterPro 4 KEGG 1 MGI 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 2 PROSITE 3 Pfam 1 RefSeq 1 SAM 1 SUPFAM 1

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

  • Length: 201
  • Mass: 22426
  • Checksum: 208C9800B830A5FB
  • Sequence:
    • MLSEASDFNS SGSRSEGSVF SRTEHSVIAA YLIVAGRRMT TNTYLSMILG AWINGLFWAL 
MPIIGWASYA PDPTGATCTI NWRNNDTSFV SYTMMVIVVN FIVPLTVMFY CYYHVSRSLR 
LYAASDCTAH LHRDWADQAD VTKMSVIMIL MFLLAWSPYS IVCLWACFGN PKKIPPSMAI 
IAPLFAKSST FYNPCIYVAA A

Genular Protein ID: 4245084045

Symbol: Q80XL3_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q80XL3

Database IDs:

AGR 1 ARBA 10 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 2 Ensembl 2 ExpressionAtlas 1 GO 5 Gene3D 1 GeneTree 1 Genevisible 1 InterPro 4 KEGG 1 MGI 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 2 PROSITE 4 Pfam 1 Proteomes 2 ProteomicsDB 1 RefSeq 1 RuleBase 1 SAM 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

Sequence Information:

  • Length: 379
  • Mass: 41853
  • Checksum: BE555040F88FEE27
  • Sequence:
    • MLSEASDFNS SGSRSEGSVF SRTEHSVIAA YLIVAGITSI LSNVVVLGIF IKYKELRTPT 
NAVIINLAFT DIGVSSIGYP MSAASDLHGS WKFGHAGCQF QGRNDRQVTG CLYTCLVPHV 
CNAGGAKRRA VDLLKLTLQM DIYAGLNIFF GMVSIGLLTV VAMDRYLTIS CPDVGRRMTT 
NTYLSMILGA WINGLFWALM PIIGWASYAP DPTGATCTIN WRNNDTSFVS YTMMVIVVNF 
IVPLTVMFYC YYHVSRSLRL YAASDCTAHL HRDWADQADV TKMSVIMILM FLLAWSPYSI 
VCLWACFGNP KKIPPSMAII APLFAKSSTF YNPCIYVAAH KKFRKAMLAM FKCQPHLAVP 
EPSTLPMDMP QSSLAPVRI

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.