Sema5a | ENSMUSG00000022231 | NCBI 20356

Details for: Sema5a

Gene ID: 20356

Symbol: Sema5a

Ensembl ID: ENSMUSG00000022231

Description: sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A

Associated with

Developmental biology
(R-MMU-1266738)
Metabolism of proteins
(R-MMU-392499)
O-glycosylation of tsr domain-containing proteins
(R-MMU-5173214)
O-linked glycosylation
(R-MMU-5173105)
Other semaphorin interactions
(R-MMU-416700)
Post-translational protein modification
(R-MMU-597592)
Semaphorin interactions
(R-MMU-373755)
Axonal fasciculation
(GO:0007413)
Axon extension
(GO:0048675)
Axon guidance
(GO:0007411)
Axon guidance receptor activity
(GO:0008046)
Blood vessel endothelial cell proliferation involved in sprouting angiogenesis
(GO:0002043)
Branching involved in blood vessel morphogenesis
(GO:0001569)
Branching morphogenesis of an epithelial tube
(GO:0048754)
Cell chemotaxis
(GO:0060326)
Cell differentiation
(GO:0030154)
Chemorepellent activity
(GO:0045499)
Chondroitin sulfate proteoglycan binding
(GO:0035373)
Detection of light stimulus involved in visual perception
(GO:0050908)
Diencephalon development
(GO:0021536)
Heparan sulfate proteoglycan binding
(GO:0043395)
Membrane
(GO:0016020)
Multicellular organism development
(GO:0007275)
Negative regulation of axon extension involved in axon guidance
(GO:0048843)
Negative regulation of cell adhesion
(GO:0007162)
Negative regulation of endothelial cell apoptotic process
(GO:2000352)
Nervous system development
(GO:0007399)
Neural crest cell migration
(GO:0001755)
Neuron projection extension
(GO:1990138)
Neuron projection guidance
(GO:0097485)
Plasma membrane
(GO:0005886)
Positive chemotaxis
(GO:0050918)
Positive regulation of actin filament depolymerization
(GO:0030836)
Positive regulation of angiogenesis
(GO:0045766)
Positive regulation of axon extension involved in axon guidance
(GO:0048842)
Positive regulation of canonical wnt signaling pathway
(GO:0090263)
Positive regulation of cell migration
(GO:0030335)
Positive regulation of endothelial cell chemotaxis
(GO:2001028)
Positive regulation of endothelial cell proliferation
(GO:0001938)
Positive regulation of extracellular matrix disassembly
(GO:0090091)
Positive regulation of phosphatidylinositol 3-kinase/protein kinase b signal transduction
(GO:0051897)
Semaphorin-plexin signaling pathway
(GO:0071526)
Semaphorin receptor binding
(GO:0030215)
Signal clustering
(GO:1990256)
Syndecan binding
(GO:0045545)

Other Information

Proteins

Q3UPZ0_MOUSE

Genular Protein ID: 1174307322

Symbol: Q3UPZ0_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q3UPZ0

Database IDs:

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

Sequence Information:

Length: 1074
Mass: 120321
Checksum: 3A231A2E0D880C1C
Sequence:

MKGACILAWL FSSLGVWRLA RPETQDPAKC QRAEHPVVSY KEIGPWLREF RAENAVDFSR 
LTFDPGQKEL VVGARNYLFR LELEDLSLIQ AVEWECDEAT KKACYSKGKS KEECQNYIRV 
LLVGGDRLFT CGTNAFTPVC TIRSLSNLTE IHDQISGMAR CPYSPQHNST ALLTASGELY 
AATAMDFPGR DPAIYRSLGT LPPLRTAQYN SKWLNEPNFV SSYDIGNFTY FFFRENAVEH 
DCGKTVFSRA ARVCKNDIGG RFLLEDTWTT FMKARLNCSR PGEVPFYYNE LQGTFFLPEL 
DLIYGIFTTN VNSIAASAVC VFNLSAISQA FNGPFKYQEN SRSAWLPYPN PNPNFQCGTM 
DQGLYVNLTE RNLQDAQKFI LMHEVVQPVT TVPSFMEDNS RFSHLAVDVV QGRETLVHII 
YLATDYGTIK KVRAPLSQSS GSCLLEEIEL FPERRSEPIR SLQILHSQSV LFVGLQEHVA 
KIPLKRCHFH QTRSACIGAQ DPYCGWDAVM KKCTSLEESL SMTQWDQSIP TCPTRNLTVD 
GSFGPWSPWT PCTHTDGTAV GSCLCRSRSC DSPAPQCGGW QCEGPRMEIT NCSRNGGWTP 
WTSWSPCSTT CGIGFQVRQR SCSNPTPRHG GRVCVGQNRE ERYCNEHLLC PPHVFWTGWG 
PWERCTAQCG GGIQARRRTC ENGPDCAGCN VEYQPCNTNA CPELKKTTPW TPWTPVNISD 
NGGHYEQRFR YTCKARLPDP NLLEVGRQRI EMRYCSSDGT SGCSTDGLSG DFLRAGRYSA 
HTVNGAWSAW TSWSQCSRDC SRGIRNRKRV CNNPEPKFGG MPCLGPSLEF QECNILPCPV 
DGVWSCWSSW SKCSATCGGG HYMRTRSCSN PAPAYGGDIC LGLHTEEALC NTQTCPESWS 
EWSDWSVCDA SGTQVRARQC ILLFPVGSQC SGNTTESRPC VFDSNFIPEV SVARSSSVEE 
KRCGEFNMFH MMAVGLSSSI LGCLLTLLVY TYCQRYQQQS HDATVIHPVS PAALNSSITN 
HINKLDKYDS VEAIKAFNKN NLILEERNKY FNPHLTGKTY SNAYFTDLNN YDEY

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Sema5a

Associated with

Other Information

High-efficiency full-length cDNA cloning. PubMed ID: 10349636

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. PubMed ID: 11042159

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. PubMed ID: 11076861

Functional annotation of a full-length mouse cDNA collection. PubMed ID: 11217851

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. PubMed ID: 12466851

Antisense Transcription in the Mammalian Transcriptome. PubMed ID: 16141073

Lineage-specific biology revealed by a finished genome assembly of the mouse. PubMed ID: 19468303