Genular: Defining Cellular Identity and Function

Details for: Snrpb

Gene ID: 20638

Symbol: Snrpb

Ensembl ID: ENSMUSG00000027404

Description: small nuclear ribonucleoprotein B

Associated with

Gene expression (transcription)
(R-MMU-74160)
Metabolism of non-coding rna
(R-MMU-194441)
Metabolism of rna
(R-MMU-8953854)
Mrna splicing
(R-MMU-72172)
Mrna splicing - major pathway
(R-MMU-72163)
Mrna splicing - minor pathway
(R-MMU-72165)
Processing of capped intron-containing pre-mrna
(R-MMU-72203)
Processing of capped intronless pre-mrna
(R-MMU-75067)
Rna polymerase ii transcription
(R-MMU-73857)
Rna polymerase ii transcription termination
(R-MMU-73856)
Slbp dependent processing of replication-dependent histone pre-mrnas
(R-MMU-77588)
Slbp independent processing of histone pre-mrnas
(R-MMU-111367)
Snrnp assembly
(R-MMU-191859)
Catalytic step 2 spliceosome
(GO:0071013)
Cytoplasm
(GO:0005737)
Cytosol
(GO:0005829)
Histone pre-mrna 3'end processing complex
(GO:0071204)
Histone pre-mrna dcp binding
(GO:0071208)
Methylosome
(GO:0034709)
Mrna processing
(GO:0006397)
Mrna splicing, via spliceosome
(GO:0000398)
Nucleoplasm
(GO:0005654)
Nucleus
(GO:0005634)
Protein binding
(GO:0005515)
Protein methylation
(GO:0006479)
Ribonucleoprotein complex
(GO:1990904)
Rna binding
(GO:0003723)
Rna splicing
(GO:0008380)
Smn-sm protein complex
(GO:0034719)
Spliceosomal complex
(GO:0005681)
Spliceosomal snrnp assembly
(GO:0000387)
Telomerase holoenzyme complex
(GO:0005697)
Telomerase rna binding
(GO:0070034)
U1 snrnp
(GO:0005685)
U1 snrnp binding
(GO:1990446)
U2 snrnp
(GO:0005686)
U2 snrnp binding
(GO:1990447)
U2-type catalytic step 2 spliceosome
(GO:0071007)
U2-type precatalytic spliceosome
(GO:0071005)
U2-type prespliceosome
(GO:0071004)
U2-type spliceosomal complex
(GO:0005684)
U4 snrnp
(GO:0005687)
U4/u6 x u5 tri-snrnp complex
(GO:0046540)
U5 snrnp
(GO:0005682)
U7 snrnp
(GO:0005683)
U12-type spliceosomal complex
(GO:0005689)

Other Information

Proteins

Small nuclear ribonucleoprotein-associated protein B

Genular Protein ID: 1307532911

Symbol: RSMB_MOUSE

Name: Small nuclear ribonucleoprotein-associated protein B

UniProtKB Accession Codes:

P27048 Q3UJT1

Database IDs:

Citations:

PubMed ID: 1376292

Title: The murine gene encoding the highly conserved Sm B protein contains a nonfunctional alternative 3' splice site.

PubMed ID: 1376292

DOI: 10.1016/0378-1119(92)90574-9

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 19470752

Title: Three proteins of the U7-specific Sm ring function as the molecular ruler to determine the site of 3'-end processing in mammalian histone pre-mRNA.

PubMed ID: 19470752

DOI: 10.1128/mcb.00296-09

PubMed ID: 24129315

Title: Immunoaffinity enrichment and mass spectrometry analysis of protein methylation.

PubMed ID: 24129315

DOI: 10.1074/mcp.o113.027870

PubMed ID: 28263986

Title: TDRD6 mediates early steps of spliceosome maturation in primary spermatocytes.

PubMed ID: 28263986

DOI: 10.1371/journal.pgen.1006660

Sequence Information:

Length: 231
Mass: 23656
Checksum: 5CB0BE7E20B93D4A
Sequence:

MTVGKSSKML QHIDYRMRCI LQDGRIFIGT FKAFDKHMNL ILCDCDEFRK IKPKNSKQAE 
REEKRVLGLV LLRGENLVSM TVEGPPPKDT GIARVPLAGA AGGPGIGRAA GRGIPAGVPM 
PQAPAGLAGP VRGVGGPSQQ VMTPQGRGTV AAAAAAATAS IAGAPTQYPP GRGGPPPPMG 
RGAPPPGMMG PPPGMRPPMG PPMGLPPGRG TPMGMPPPGM RPPPPGMRGL L

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Snrpb

Associated with

Other Information

The murine gene encoding the highly conserved Sm B protein contains a nonfunctional alternative 3' splice site. PubMed ID: 1376292

The transcriptional landscape of the mammalian genome. PubMed ID: 16141072

Three proteins of the U7-specific Sm ring function as the molecular ruler to determine the site of 3'-end processing in mammalian histone pre-mRNA. PubMed ID: 19470752