Genular: Defining Cellular Identity and Function

Details for: Supt4a

Gene ID: 20922

Symbol: Supt4a

Ensembl ID: ENSMUSG00000020485

Description: SPT4A, DSIF elongation factor subunit

Associated with

Formation of rna pol ii elongation complex
(R-MMU-112382)
Formation of the early elongation complex
(R-MMU-113418)
Gene expression (transcription)
(R-MMU-74160)
Generic transcription pathway
(R-MMU-212436)
Rna polymerase ii pre-transcription events
(R-MMU-674695)
Rna polymerase ii transcribes snrna genes
(R-MMU-6807505)
Rna polymerase ii transcription
(R-MMU-73857)
Rna polymerase ii transcription elongation
(R-MMU-75955)
Tp53 regulates transcription of dna repair genes
(R-MMU-6796648)
Transcriptional regulation by tp53
(R-MMU-3700989)
Dsif complex
(GO:0032044)
Metal ion binding
(GO:0046872)
Negative regulation of dna-templated transcription, elongation
(GO:0032785)
Negative regulation of transcription by rna polymerase ii
(GO:0000122)
Negative regulation of transcription elongation by rna polymerase ii
(GO:0034244)
Nucleoplasm
(GO:0005654)
Nucleus
(GO:0005634)
Positive regulation of dna-templated transcription, elongation
(GO:0032786)
Positive regulation of transcription by rna polymerase ii
(GO:0045944)
Protein heterodimerization activity
(GO:0046982)
Regulation of dna-templated transcription
(GO:0006355)
Regulation of transcription elongation by rna polymerase ii
(GO:0034243)
Rna polymerase ii complex binding
(GO:0000993)
Transcription elongation by rna polymerase ii
(GO:0006368)
Zinc ion binding
(GO:0008270)

Other Information

Proteins

Transcription elongation factor SPT4-A

Genular Protein ID: 3419589735

Symbol: SPT4A_MOUSE

Name: Transcription elongation factor SPT4-A

UniProtKB Accession Codes:

P63271 B2KGH6 Q16550 Q3TIA2 Q5NCP8 Q5NCP9 Q5NCQ0 Q62387

Database IDs:

Citations:

PubMed ID: 8786137

Title: Isolation and characterization of the human and mouse homologues (SUPT4H and Supt4h) of the yeast SPT4 gene.

PubMed ID: 8786137

DOI: 10.1006/geno.1996.0299

PubMed ID: 9776760

Title: Comparison of murine Supt4h and a nearly identical expressed, processed gene: evidence of sequence conservation through gene conversion extending into the untranslated regions.

PubMed ID: 9776760

DOI: 10.1093/nar/26.21.4960

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

Length: 117
Mass: 13193
Checksum: 09EDF007501D0F03
Sequence:

MALETVPKDL RHLRACLLCS LVKTIDQFEY DGCDNCDAYL QMKGNREMVY DCTSSSFDGI 
IAMMSPEDSW VSKWQRVSNF KPGVYAVSVT GRLPQGIVRE LKSRGVAYKS RDTAIKT

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Supt4a

Associated with

Other Information

Isolation and characterization of the human and mouse homologues (SUPT4H and Supt4h) of the yeast SPT4 gene. PubMed ID: 8786137

Comparison of murine Supt4h and a nearly identical expressed, processed gene: evidence of sequence conservation through gene conversion extending into the untranslated regions. PubMed ID: 9776760

The transcriptional landscape of the mammalian genome. PubMed ID: 16141072