Genular: Defining Cellular Identity and Function

Details for: Taf1b

Gene ID: 21340

Symbol: Taf1b

Ensembl ID: ENSMUSG00000059669

Description: TATA-box binding protein associated factor, RNA polymerase I, B

Associated with

B-wich complex positively regulates rrna expression
(R-MMU-5250924)
Epigenetic regulation of gene expression
(R-MMU-212165)
Gene expression (transcription)
(R-MMU-74160)
Positive epigenetic regulation of rrna expression
(R-MMU-5250913)
Rna polymerase i promoter clearance
(R-MMU-73854)
Rna polymerase i promoter escape
(R-MMU-73772)
Rna polymerase i transcription
(R-MMU-73864)
Rna polymerase i transcription initiation
(R-MMU-73762)
Rna polymerase i transcription termination
(R-MMU-73863)
Dna binding
(GO:0003677)
Metal ion binding
(GO:0046872)
Nucleolar large rrna transcription by rna polymerase i
(GO:0042790)
Nucleolus
(GO:0005730)
Nucleoplasm
(GO:0005654)
Nucleus
(GO:0005634)
Protein binding
(GO:0005515)
Rna polymerase i core factor complex
(GO:0070860)
Rna polymerase i core promoter sequence-specific dna binding
(GO:0001164)
Rna polymerase i preinitiation complex assembly
(GO:0001188)
Rna polymerase i transcription regulator complex
(GO:0000120)
Rna polymerase transcription factor sl1 complex
(GO:0005668)
Transcription by rna polymerase i
(GO:0006360)

Other Information

Proteins

TATA box-binding protein-associated factor RNA polymerase I subunit B

Genular Protein ID: 2484922014

Symbol: TAF1B_MOUSE

Name: TATA box-binding protein-associated factor RNA polymerase I subunit B

UniProtKB Accession Codes:

P97358 E9QJY7 Q08AT7 Q3V292 Q6NSS9

Database IDs:

Citations:

PubMed ID: 9050847

Title: Cloning of murine RNA polymerase I-specific TAF factors: conserved interactions between the subunits of the species-specific transcription initiation factor TIF-IB/SL1.

PubMed ID: 9050847

DOI: 10.1073/pnas.94.5.1733

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 12015311

Title: Rrn3 phosphorylation is a regulatory checkpoint for ribosome biogenesis.

PubMed ID: 12015311

DOI: 10.1074/jbc.m201232200

PubMed ID: 21228480

Title: Identification of novel nuclear protein interactions with the N-terminal part of filamin A.

PubMed ID: 21228480

DOI: 10.1271/bbb.100567

Sequence Information:

Length: 586
Mass: 67954
Checksum: 85E0EBB8C742EE71
Sequence:

MDVEEVKAFR DRCSQCAAVS WGLTDEGKYY CTSCHNVTDR SEEVVSAADI PNTKINSINR 
GLRQRSKHEK GWDWYVCEGF QCILYHQAKA LETLGVSPEL KNEVLHNFWK RYLQKSKQAY 
CKNPVRTSGR KAKVLEDSVQ SSDLGSDLEL LSDTTCPLES EAEFQSDPQI PKPFPVTKGS 
PKSASVCSGS VDGVEYSERK EKGLVKMTVP RTLALCSLSL LWQRETITVS DLLRFVEEDH 
IPYINAFKLF PEEMKVYGRD KGIFAIESWP DYEDIYKNMI ELAIFLDLPR FPDITEDCYL 
HPNTLCMKYL LEVNLPDEMH TLTCQVVKLT GIGEVDFLTF DPIAKTKRTV KYDVQAMAVI 
VVVLKLLFLL DDKLEWSYSD LAEAYNEQHR EDTPQFDFRK WYQVMKKTFD EKRRKWEEAR 
ARYAWKTKRP LYRSHIDKSV AYKRRKMVEN LQKQFSALVG SSPVVEKQAP SSFQFNWTEE 
GTDSPCFHGH SLQGLLIMKG QSMITKNSLY WLSTQKFCKS YCKHVTTYEE SNFSLSYQFI 
LNIFSFLLRI KTSALHEEVS LLEKKLFEKK YNESKKSSGS KKGRRH

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Taf1b

Associated with

Other Information

Cloning of murine RNA polymerase I-specific TAF factors: conserved interactions between the subunits of the species-specific transcription initiation factor TIF-IB/SL1. PubMed ID: 9050847

The transcriptional landscape of the mammalian genome. PubMed ID: 16141072

Lineage-specific biology revealed by a finished genome assembly of the mouse. PubMed ID: 19468303

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Rrn3 phosphorylation is a regulatory checkpoint for ribosome biogenesis. PubMed ID: 12015311