Genular: Defining Cellular Identity and Function

Details for: Zfp42

Gene ID: 22702

Symbol: Zfp42

Ensembl ID: ENSMUSG00000051176

Description: zinc finger protein 42

Associated with

Cellular response to leukemia inhibitory factor
(GO:1990830)
Cytoplasm
(GO:0005737)
Dna-binding transcription activator activity, rna polymerase ii-specific
(GO:0001228)
Dna-binding transcription factor activity, rna polymerase ii-specific
(GO:0000981)
Dna binding
(GO:0003677)
Genomic imprinting
(GO:0071514)
In utero embryonic development
(GO:0001701)
Metal ion binding
(GO:0046872)
Nucleus
(GO:0005634)
Pcg protein complex
(GO:0031519)
Positive regulation of transcription by rna polymerase ii
(GO:0045944)
Protein-containing complex
(GO:0032991)
Protein binding
(GO:0005515)
Regulation of transcription by rna polymerase ii
(GO:0006357)
Rna polymerase ii cis-regulatory region sequence-specific dna binding
(GO:0000978)
Sequence-specific dna binding
(GO:0043565)
Sequence-specific double-stranded dna binding
(GO:1990837)
Spermatid development
(GO:0007286)
Transcription regulator complex
(GO:0005667)

Other Information

Proteins

Zinc finger protein 42
E9QK22_MOUSE

Genular Protein ID: 2541929790

Symbol: ZFP42_MOUSE

Name: Zinc finger protein 42

UniProtKB Accession Codes:

P22227 Q4KMN3 Q7TPU3

Database IDs:

Citations:

PubMed ID: 2511439

Title: Expression of REX-1, a gene containing zinc finger motifs, is rapidly reduced by retinoic acid in F9 teratocarcinoma cells.

PubMed ID: 2511439

DOI: 10.1128/mcb.9.12.5623-5629.1989

PubMed ID: 8474450

Title: An octamer motif contributes to the expression of the retinoic acid-regulated zinc finger gene Rex-1 (Zfp-42) in F9 teratocarcinoma cells.

PubMed ID: 8474450

DOI: 10.1128/mcb.13.5.2919-2928.1993

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 1821852

Title: Specific expression of a retinoic acid-regulated, zinc-finger gene, Rex-1, in preimplantation embryos, trophoblast and spermatocytes.

PubMed ID: 1821852

DOI: 10.1242/dev.113.3.815

PubMed ID: 15749260

Title: Effect of nicotine on Oct-4 and Rex-1 expression of mouse embryonic stem cells.

PubMed ID: 15749260

DOI: 10.1016/j.reprotox.2004.10.008

PubMed ID: 16714766

Title: Regulation of the pluripotency marker Rex-1 by Nanog and Sox2.

PubMed ID: 16714766

DOI: 10.1074/jbc.m601811200

PubMed ID: 16908534

Title: The Grb2/Mek pathway represses Nanog in murine embryonic stem cells.

PubMed ID: 16908534

DOI: 10.1128/mcb.00508-06

PubMed ID: 16960129

Title: Screening for genes essential for mouse embryonic stem cell self-renewal using a subtractive RNA interference library.

PubMed ID: 16960129

DOI: 10.1634/stemcells.2006-0017

PubMed ID: 21085182

Title: Molecular coupling of Tsix regulation and pluripotency.

PubMed ID: 21085182

DOI: 10.1038/nature09496

PubMed ID: 22596162

Title: RNF12 initiates X-chromosome inactivation by targeting REX1 for degradation.

PubMed ID: 22596162

DOI: 10.1038/nature11070

Sequence Information:

Length: 288
Mass: 32398
Checksum: 4B1ABFDF372A7D7B
Sequence:

MNEQKMNEQM KKTAKTSGQK GPGGRALDRL TLKQDEARPV QNTRVEAPRV TYTIRDESEI 
SPETEEDGFP DGYLECIIRG EFSEPILEED FLFKSFESLE EVEQNLSRQV LEASSLLESS 
LEYMTKGTKQ EKTEVTQETP PLRVGASSLL AGGPAEKPEG GVYCGVLSML ECPQAGCKKK 
LRGKTALRKH MLVHGPRRHV CAECGKAFTE SSKLKRHFLV HTGEKPYQCT FEGCGKRFSL 
DFNLRTHIRI HTGERRFVCP FDGCEKSFIQ SNNQKIHILT HAKAGKKC

Genular Protein ID: 1234331224

Symbol: E9QK22_MOUSE

Name: N/A

UniProtKB Accession Codes:

E9QK22

Database IDs:

Citations:

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

Sequence Information:

Length: 288
Mass: 32511
Checksum: 6F8CB5BFFEDA81ED
Sequence:

MNEQKMNEQM KKTAKTSGQK GPGGRALDRL TLKQDEARPV QNTRVEAPRV TYTIRDESEI 
SPETEEDGFP DGYLECIIRG EFSEPILEED FLFKSFESLE EVEQNLSRQV LEASSLLESS 
LEYMTKGTKQ EKREVTQETP PLRVGASSLL AGGPAEKPEG GVYCGVLSML ECPQAGCKKK 
LRDKTALRKH MLVHGPRRHV CAECGKAFTE SSKLKRHFLV HTGEKPYQCT FEGCGKRFSL 
DFNLRTHIRI HTGERRFVCP FDGCEKSFIQ SNNQKIHILT HAKAGKKC

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Zfp42

Associated with

Other Information

Expression of REX-1, a gene containing zinc finger motifs, is rapidly reduced by retinoic acid in F9 teratocarcinoma cells. PubMed ID: 2511439

An octamer motif contributes to the expression of the retinoic acid-regulated zinc finger gene Rex-1 (Zfp-42) in F9 teratocarcinoma cells. PubMed ID: 8474450

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Specific expression of a retinoic acid-regulated, zinc-finger gene, Rex-1, in preimplantation embryos, trophoblast and spermatocytes. PubMed ID: 1821852

Effect of nicotine on Oct-4 and Rex-1 expression of mouse embryonic stem cells. PubMed ID: 15749260

Regulation of the pluripotency marker Rex-1 by Nanog and Sox2. PubMed ID: 16714766

The Grb2/Mek pathway represses Nanog in murine embryonic stem cells. PubMed ID: 16908534

Screening for genes essential for mouse embryonic stem cell self-renewal using a subtractive RNA interference library. PubMed ID: 16960129

Molecular coupling of Tsix regulation and pluripotency. PubMed ID: 21085182

RNF12 initiates X-chromosome inactivation by targeting REX1 for degradation. PubMed ID: 22596162

Lineage-specific biology revealed by a finished genome assembly of the mouse. PubMed ID: 19468303