Details for: PUF60

Gene ID: 22827

Symbol: PUF60

Ensembl ID: ENSG00000179950

Description: poly(U) binding splicing factor 60

Associated with

Other Information

Genular Protein ID: 3450494228

Symbol: PUF60_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q9UHX1 A8K8K8 Q969E7 Q96D94 Q96H63 Q99628 Q9NZA0 Q9UJY7

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 BMRB 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 6 CDD 3 CORUM 1 CTD 1 ChiTaRS 1 DIP 1 DMDM 1 DNASU 1 DisGeNET 1 ELM 1 EMBL 12 EPD 1 Ensembl 10 EvolutionaryTrace 1 ExpressionAtlas 1 GO 11 Gene3D 1 GeneCards 1 GeneTree 1 GeneWiki 1 Genevisible 1 GenomeRNAi 1 GlyGen 1 HGNC 2 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 8 KEGG 1 MANE-Select 1 MIM 3 MINT 1 MalaCards 1 MassIVE 1 MaxQB 1 MetOSite 1 NCBI Taxonomy 1 NCBIfam 1 OMA 1 OpenTargets 1 Orphanet 2 OrthoDB 1 PANTHER 2 PDB 23 PDBsum 16 PRO 1 PROSITE 1 PROSITE-ProRule 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 1 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 6 Pumba 1 RNAct 1 Reactome 1 RefSeq 10 SAM 1 SIGNOR 1 SMART 2 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 SwissPalm 1 TopDownProteomics 1 TreeFam 1 UCSC 1 UniProtKB 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 10882074

Title: The FBP interacting repressor targets TFIIH to inhibit activated transcription.

PubMed ID: 10882074

DOI: 10.1016/s1097-2765(00)80428-1

PubMed ID: 10668799

Title: Interaction cloning and characterization of RoBPI, a novel protein binding to human Ro ribonucleoproteins.

PubMed ID: 10668799

DOI: 10.1017/s1355838200990277

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 10606266

Title: PUF60: a novel U2AF65-related splicing activity.

PubMed ID: 10606266

DOI: 10.1017/s1355838299991938

PubMed ID: 11239393

Title: Defective interplay of activators and repressors with TFIH in xeroderma pigmentosum.

PubMed ID: 11239393

DOI: 10.1016/s0092-8674(01)00223-9

PubMed ID: 16452196

Title: An essential role of alternative splicing of c-myc suppressor FUSE-binding protein-interacting repressor in carcinogenesis.

PubMed ID: 16452196

DOI: 10.1158/0008-5472.can-04-4459

PubMed ID: 16628215

Title: The FUSE/FBP/FIR/TFIIH system is a molecular machine programming a pulse of c-myc expression.

PubMed ID: 16628215

DOI: 10.1038/sj.emboj.7601101

PubMed ID: 16964243

Title: A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

PubMed ID: 16964243

DOI: 10.1038/nbt1240

PubMed ID: 17579712

Title: Control of pre-mRNA splicing by the general splicing factors PUF60 and U2AF.

PubMed ID: 17579712

DOI: 10.1371/journal.pone.0000538

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25218447

Title: Uncovering global SUMOylation signaling networks in a site-specific manner.

PubMed ID: 25218447

DOI: 10.1038/nsmb.2890

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

DOI: 10.1038/nsmb.3366

PubMed ID: 24140112

Title: SCRIB and PUF60 are primary drivers of the multisystemic phenotypes of the 8q24.3 copy-number variant.

PubMed ID: 24140112

DOI: 10.1016/j.ajhg.2013.09.010

Sequence Information:

  • Length: 559
  • Mass: 59875
  • Checksum: 619F3C30D1C5951C
  • Sequence:
    • MATATIALQV NGQQGGGSEP AAAAAVVAAG DKWKPPQGTD SIKMENGQST AAKLGLPPLT 
PEQQEALQKA KKYAMEQSIK SVLVKQTIAH QQQQLTNLQM AAVTMGFGDP LSPLQSMAAQ 
RQRALAIMCR VYVGSIYYEL GEDTIRQAFA PFGPIKSIDM SWDSVTMKHK GFAFVEYEVP 
EAAQLALEQM NSVMLGGRNI KVGRPSNIGQ AQPIIDQLAE EARAFNRIYV ASVHQDLSDD 
DIKSVFEAFG KIKSCTLARD PTTGKHKGYG FIEYEKAQSS QDAVSSMNLF DLGGQYLRVG 
KAVTPPMPLL TPATPGGLPP AAAVAAAAAT AKITAQEAVA GAAVLGTLGT PGLVSPALTL 
AQPLGTLPQA VMAAQAPGVI TGVTPARPPI PVTIPSVGVV NPILASPPTL GLLEPKKEKE 
EEELFPESER PEMLSEQEHM SISGSSARHM VMQKLLRKQE STVMVLRNMV DPKDIDDDLE 
GEVTEECGKF GAVNRVIIYQ EKQGEEEDAE IIVKIFVEFS IASETHKAIQ ALNGRWFAGR 
KVVAEVYDQE RFDNSDLSA

Genular Protein ID: 529054166

Symbol: H0YEM1_HUMAN

Name: N/A

UniProtKB Accession Codes:

H0YEM1

Database IDs:

ARBA 8 Antibodypedia 1 Bgee 1 CDD 3 CTD 1 ChiTaRS 1 EMBL 4 EPD 1 Ensembl 2 GO 6 Gene3D 1 GeneTree 1 HGNC 1 InterPro 8 MassIVE 1 MaxQB 1 NCBI Taxonomy 1 NCBIfam 1 PANTHER 2 PROSITE 2 PROSITE-ProRule 1 PeptideAtlas 1 Pfam 1 Proteomes 2 ProteomicsDB 1 RefSeq 1 SAM 1 SMART 2 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11181995

Title: The sequence of the human genome.

PubMed ID: 11181995

DOI: 10.1126/science.1058040

PubMed ID: 16964243

Title: A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

PubMed ID: 16964243

DOI: 10.1038/nbt1240

PubMed ID: 16421571

Title: DNA sequence and analysis of human chromosome 8.

PubMed ID: 16421571

DOI: 10.1038/nature04406

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

Sequence Information:

  • Length: 558
  • Mass: 59747
  • Checksum: 48E0A180373670A8
  • Sequence:
    • MATATIALVN GQQGGGSEPA AAAAVVAAGD KWKPPQGTDS IKMENGQSTA AKLGLPPLTP 
EQQEALQKAK KYAMEQSIKS VLVKQTIAHQ QQQLTNLQMA AVTMGFGDPL SPLQSMAAQR 
QRALAIMCRV YVGSIYYELG EDTIRQAFAP FGPIKSIDMS WDSVTMKHKG FAFVEYEVPE 
AAQLALEQMN SVMLGGRNIK VGRPSNIGQA QPIIDQLAEE ARAFNRIYVA SVHQDLSDDD 
IKSVFEAFGK IKSCTLARDP TTGKHKGYGF IEYEKAQSSQ DAVSSMNLFD LGGQYLRVGK 
AVTPPMPLLT PATPGGLPPA AAVAAAAATA KITAQEAVAG AAVLGTLGTP GLVSPALTLA 
QPLGTLPQAV MAAQAPGVIT GVTPARPPIP VTIPSVGVVN PILASPPTLG LLEPKKEKEE 
EELFPESERP EMLSEQEHMS ISGSSARHMV MQKLLRKQES TVMVLRNMVD PKDIDDDLEG 
EVTEECGKFG AVNRVIIYQE KQGEEEDAEI IVKIFVEFSI ASETHKAIQA LNGRWFAGRK 
VVAEVYDQER FDNSDLSA

Genular Protein ID: 3247493941

Symbol: E9PL19_HUMAN

Name: N/A

UniProtKB Accession Codes:

E9PL19

Database IDs:

ARBA 8 Antibodypedia 1 Bgee 1 CDD 3 CTD 1 ChiTaRS 1 EMBL 2 EPD 1 Ensembl 3 GO 6 Gene3D 1 GeneTree 1 HGNC 1 InterPro 8 MassIVE 1 MaxQB 1 NCBI Taxonomy 1 NCBIfam 1 PANTHER 2 PROSITE 2 PROSITE-ProRule 1 Pfam 1 Proteomes 2 ProteomicsDB 1 RefSeq 4 SAM 1 SMART 2 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 16964243

Title: A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

PubMed ID: 16964243

DOI: 10.1038/nbt1240

PubMed ID: 16421571

Title: DNA sequence and analysis of human chromosome 8.

PubMed ID: 16421571

DOI: 10.1038/nature04406

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

Sequence Information:

  • Length: 596
  • Mass: 64061
  • Checksum: 91AC740CC4667733
  • Sequence:
    • MEQLNLADSG LVGKEARRCR RASPPMGMPS AWWLQNEAGC LFAARQVNGQ QGGGSEPAAA 
AAVVAAGDKW KPPQGTDSIK MENGQSTAAK LGLPPLTPEQ QEALQKAKKY AMEQSIKSVL 
VKQTIAHQQQ QLTNLQMAAV TMGFGDPLSP LQSMAAQRQR ALAIMCRVYV GSIYYELGED 
TIRQAFAPFG PIKSIDMSWD SVTMKHKGFA FVEYEVPEAA QLALEQMNSV MLGGRNIKVG 
RPSNIGQAQP IIDQLAEEAR AFNRIYVASV HQDLSDDDIK SVFEAFGKIK SCTLARDPTT 
GKHKGYGFIE YEKAQSSQDA VSSMNLFDLG GQYLRVGKAV TPPMPLLTPA TPGGLPPAAA 
VAAAAATAKI TAQEAVAGAA VLGTLGTPGL VSPALTLAQP LGTLPQAVMA AQAPGVITGV 
TPARPPIPVT IPSVGVVNPI LASPPTLGLL EPKKEKEEEE LFPESERPEM LSEQEHMSIS 
GSSARHMVMQ KLLRKQESTV MVLRNMVDPK DIDDDLEGEV TEECGKFGAV NRVIIYQEKQ 
GEEEDAEIIV KIFVEFSIAS ETHKAIQALN GRWFAGRKVV AEVYDQERFD NSDLSA

Genular Protein ID: 485970257

Symbol: E9PQ56_HUMAN

Name: N/A

UniProtKB Accession Codes:

E9PQ56

Database IDs:

ARBA 8 Antibodypedia 1 Bgee 1 CDD 3 CTD 1 ChiTaRS 1 EMBL 4 EPD 2 Ensembl 2 GO 6 Gene3D 1 GeneTree 1 HGNC 1 HOGENOM 1 InterPro 8 MassIVE 1 MaxQB 1 NCBI Taxonomy 1 NCBIfam 1 PANTHER 2 PROSITE 2 PROSITE-ProRule 1 Pfam 1 Proteomes 2 ProteomicsDB 1 RefSeq 1 SAM 1 SMART 2 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11181995

Title: The sequence of the human genome.

PubMed ID: 11181995

DOI: 10.1126/science.1058040

PubMed ID: 16964243

Title: A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

PubMed ID: 16964243

DOI: 10.1038/nbt1240

PubMed ID: 16421571

Title: DNA sequence and analysis of human chromosome 8.

PubMed ID: 16421571

DOI: 10.1038/nature04406

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19413330

Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.

PubMed ID: 19413330

DOI: 10.1021/ac9004309

PubMed ID: 19608861

Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.

PubMed ID: 19608861

DOI: 10.1126/science.1175371

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

Sequence Information:

  • Length: 541
  • Mass: 58043
  • Checksum: FBB69123A5EAD4F3
  • Sequence:
    • MATATIALVN GQQGGGSEPA AAAAVVAAGD KWKPPQGTDS IKMENGQSTA AKLGLPPLTP 
EQQEALQKAK KYAMEQSIKS VLVKQTIAHQ QQQLTNLQMA AQRQRALAIM CRVYVGSIYY 
ELGEDTIRQA FAPFGPIKSI DMSWDSVTMK HKGFAFVEYE VPEAAQLALE QMNSVMLGGR 
NIKVGRPSNI GQAQPIIDQL AEEARAFNRI YVASVHQDLS DDDIKSVFEA FGKIKSCTLA 
RDPTTGKHKG YGFIEYEKAQ SSQDAVSSMN LFDLGGQYLR VGKAVTPPMP LLTPATPGGL 
PPAAAVAAAA ATAKITAQEA VAGAAVLGTL GTPGLVSPAL TLAQPLGTLP QAVMAAQAPG 
VITGVTPARP PIPVTIPSVG VVNPILASPP TLGLLEPKKE KEEEELFPES ERPEMLSEQE 
HMSISGSSAR HMVMQKLLRK QESTVMVLRN MVDPKDIDDD LEGEVTEECG KFGAVNRVII 
YQEKQGEEED AEIIVKIFVE FSIASETHKA IQALNGRWFA GRKVVAEVYD QERFDNSDLS 
A

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.