Details for: TRAPPC8
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 1.78
Marker Score: 3,915 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 1.74
Marker Score: 66,130 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 1.73
Marker Score: 63,928 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.72
Marker Score: 105,733 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 1.7
Marker Score: 25,482 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: 1.7
Marker Score: 33,825 - Cell Name: neuron (CL0000540)
Fold Change: 1.68
Marker Score: 6,830 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 1.65
Marker Score: 1,828 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 1.65
Marker Score: 1,903 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 1.64
Marker Score: 12,603 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 1.64
Marker Score: 15,621 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 1.64
Marker Score: 35,008 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 1.64
Marker Score: 15,398 - Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.62
Marker Score: 6,263 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 1.61
Marker Score: 13,864 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 1.56
Marker Score: 6,484 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 1.56
Marker Score: 457 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 1.48
Marker Score: 15,247 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 1.45
Marker Score: 6,076 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 1.45
Marker Score: 2,240 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 1.36
Marker Score: 1,830 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 1.32
Marker Score: 791 - Cell Name: OFF retinal ganglion cell (CL4023033)
Fold Change: 1.29
Marker Score: 540 - Cell Name: central nervous system macrophage (CL0000878)
Fold Change: 1.27
Marker Score: 633 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: 1.27
Marker Score: 628 - Cell Name: oogonial cell (CL0000024)
Fold Change: 1.24
Marker Score: 1,777 - Cell Name: renal alpha-intercalated cell (CL0005011)
Fold Change: 1.23
Marker Score: 649 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 1.23
Marker Score: 1,490 - Cell Name: renal principal cell (CL0005009)
Fold Change: 1.23
Marker Score: 945 - Cell Name: kidney interstitial fibroblast (CL1000692)
Fold Change: 1.22
Marker Score: 2,341 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 1.19
Marker Score: 7,664 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 1.18
Marker Score: 688 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: 1.16
Marker Score: 677 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 1.15
Marker Score: 38,990 - Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
Fold Change: 1.14
Marker Score: 1,224 - Cell Name: midzonal region hepatocyte (CL0019028)
Fold Change: 1.12
Marker Score: 4,827 - Cell Name: ciliated cell (CL0000064)
Fold Change: 1.11
Marker Score: 3,806 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.09
Marker Score: 17,083 - Cell Name: squamous epithelial cell (CL0000076)
Fold Change: 1.09
Marker Score: 742 - Cell Name: ON retinal ganglion cell (CL4023032)
Fold Change: 1.09
Marker Score: 297 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: 1.07
Marker Score: 4,970 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 1.04
Marker Score: 1,295 - Cell Name: fat cell (CL0000136)
Fold Change: 1.03
Marker Score: 578 - Cell Name: podocyte (CL0000653)
Fold Change: 1.02
Marker Score: 377 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: 1.02
Marker Score: 5,465 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: 1
Marker Score: 2,389 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71,695 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 47,920 - Cell Name: regular atrial cardiac myocyte (CL0002129)
Fold Change: 0.99
Marker Score: 3,525 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30,390 - Cell Name: A2 amacrine cell (CL0004219)
Fold Change: 0.97
Marker Score: 309 - Cell Name: regular ventricular cardiac myocyte (CL0002131)
Fold Change: 0.97
Marker Score: 21,689 - Cell Name: cholangiocyte (CL1000488)
Fold Change: 0.97
Marker Score: 361 - Cell Name: renal interstitial pericyte (CL1001318)
Fold Change: 0.96
Marker Score: 920 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.96
Marker Score: 577 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.96
Marker Score: 2,255 - Cell Name: endothelial cell of pericentral hepatic sinusoid (CL0019022)
Fold Change: 0.95
Marker Score: 1,015 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: 0.95
Marker Score: 299 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.94
Marker Score: 2,397 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 0.93
Marker Score: 1,166 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.93
Marker Score: 479 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.92
Marker Score: 434 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 0.92
Marker Score: 446 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 0.92
Marker Score: 312 - Cell Name: oligodendrocyte precursor cell (CL0002453)
Fold Change: 0.91
Marker Score: 1,128 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 0.9
Marker Score: 1,839 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.9
Marker Score: 2,705 - Cell Name: taste receptor cell (CL0000209)
Fold Change: 0.9
Marker Score: 780 - Cell Name: lung goblet cell (CL1000143)
Fold Change: 0.89
Marker Score: 257 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.89
Marker Score: 1,446 - Cell Name: parietal epithelial cell (CL1000452)
Fold Change: 0.88
Marker Score: 320 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5,294 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: 0.86
Marker Score: 2,464 - Cell Name: kidney connecting tubule epithelial cell (CL1000768)
Fold Change: 0.86
Marker Score: 1,222 - Cell Name: epithelial cell of prostate (CL0002231)
Fold Change: 0.86
Marker Score: 599 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.86
Marker Score: 309 - Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
Fold Change: 0.86
Marker Score: 868 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.85
Marker Score: 4,844 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.84
Marker Score: 14,988 - Cell Name: photoreceptor cell (CL0000210)
Fold Change: 0.84
Marker Score: 634 - Cell Name: male germ cell (CL0000015)
Fold Change: 0.84
Marker Score: 241 - Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
Fold Change: 0.82
Marker Score: 7,131 - Cell Name: astrocyte (CL0000127)
Fold Change: 0.82
Marker Score: 710 - Cell Name: nasal mucosa goblet cell (CL0002480)
Fold Change: 0.82
Marker Score: 547 - Cell Name: mesangial cell (CL0000650)
Fold Change: 0.81
Marker Score: 977 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.81
Marker Score: 916 - Cell Name: cerebellar granule cell precursor (CL0002362)
Fold Change: 0.8
Marker Score: 446 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.79
Marker Score: 256 - Cell Name: lactocyte (CL0002325)
Fold Change: 0.79
Marker Score: 12,746 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.79
Marker Score: 318 - Cell Name: pyramidal neuron (CL0000598)
Fold Change: 0.79
Marker Score: 1,332 - Cell Name: early T lineage precursor (CL0002425)
Fold Change: 0.79
Marker Score: 606 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.79
Marker Score: 833 - Cell Name: adipocyte of epicardial fat of left ventricle (CL1000311)
Fold Change: 0.79
Marker Score: 208 - Cell Name: hepatic stellate cell (CL0000632)
Fold Change: 0.79
Marker Score: 297 - Cell Name: mature microglial cell (CL0002629)
Fold Change: 0.78
Marker Score: 283 - Cell Name: melanocyte (CL0000148)
Fold Change: 0.78
Marker Score: 316 - Cell Name: epithelial cell of lower respiratory tract (CL0002632)
Fold Change: 0.77
Marker Score: 3,225 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 0.77
Marker Score: 707 - Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
Fold Change: 0.77
Marker Score: 2,060
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3050139758
Symbol: TPPC8_HUMAN
Name: Trafficking protein particle complex subunit 8
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10231032
Title: Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
PubMed ID: 10231032
PubMed ID: 11230166
Title: Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs.
PubMed ID: 11230166
DOI: 10.1101/gr.gr1547r
PubMed ID: 16177791
Title: DNA sequence and analysis of human chromosome 18.
PubMed ID: 16177791
DOI: 10.1038/nature03983
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 11805826
Title: Functional organization of the yeast proteome by systematic analysis of protein complexes.
PubMed ID: 11805826
DOI: 10.1038/415141a
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21525244
Title: C4orf41 and TTC-15 are mammalian TRAPP components with a role at an early stage in ER-to-Golgi trafficking.
PubMed ID: 21525244
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 26711178
Title: TBC1D14 regulates autophagy via the TRAPP complex and ATG9 traffic.
PubMed ID: 26711178
PubMed ID: 16959974
Title: The consensus coding sequences of human breast and colorectal cancers.
PubMed ID: 16959974
Sequence Information:
- Length: 1435
- Mass: 160997
- Checksum: A6D60A7C9E65F46D
- Sequence:
MAQCVQSVQE LIPDSFVPCV AALCSDEAER LTRLNHLSFA ELLKPFSRLT SEVHMRDPNN QLHVIKNLKI AVSNIVTQPP QPGAIRKLLN DVVSGSQPAE GLVANVITAG DYDLNISATT PWFESYRETF LQSMPALDHE FLNHYLACML VASSSEAEPV EQFSKLSQEQ HRIQHNSDYS YPKWFIPNTL KYYVLLHDVS AGDEQRAESI YEEMKQKYGT QGCYLLKINS RTSNRASDEQ IPDPWSQYLQ KNSIQNQESY EDGPCTITSN KNSDNNLLSL DGLDNEVKDG LPNNFRAHPL QLEQSSDPSN SIDGPDHLRS ASSLHETKKG NTGIIHGACL TLTDHDRIRQ FIQEFTFRGL LPHIEKTIRQ LNDQLISRKG LSRSLFSATK KWFSGSKVPE KSINDLKNTS GLLYPPEAPE LQIRKMADLC FLVQHYDLAY SCYHTAKKDF LNDQAMLYAA GALEMAAVSA FLQPGAPRPY PAHYMDTAIQ TYRDICKNMV LAERCVLLSA ELLKSQSKYS EAAALLIRLT SEDSDLRSAL LLEQAAHCFI NMKSPMVRKY AFHMILAGHR FSKAGQKKHA LRCYCQAMQV YKGKGWSLAE DHINFTIGRQ SYTLRQLDNA VSAFRHILIN ESKQSAAQQG AFLREYLYVY KNVSQLSPDG PLPQLPLPYI NSSATRVFFG HDRRPADGEK QAATHVSLDQ EYDSESSQQW RELEEQVVSV VNKGVIPSNF HPTQYCLNSY SDNSRFPLAV VEEPITVEVA FRNPLKVLLL LTDLSLLWKF HPKDFSGKDN EEVKQLVTSE PEMIGAEVIS EFLINGEESK VARLKLFPHH IGELHILGVV YNLGTIQGSM TVDGIGALPG CHTGKYSLSM SVRGKQDLEI QGPRLNNTKE EKTSVKYGPD RRLDPIITEE MPLLEVFFIH FPTGLLCGEI RKAYVEFVNV SKCPLTGLKV VSKRPEFFTF GGNTAVLTPL SPSASENCSA YKTVVTDATS VCTALISSAS SVDFGIGTGS QPEVIPVPLP DTVLLPGASV QLPMWLRGPD EEGVHEINFL FYYESVKKQP KIRHRILRHT AIICTSRSLN VRATVCRSNS LENEEGRGGN MLVFVDVENT NTSEAGVKEF HIVQVSSSSK HWKLQKSVNL SENKDTKLAS REKGKFCFKA IRCEKEEAAT QSSEKYTFAD IIFGNEQIIS SASPCADFFY RSLSSELKKP QAHLPVHTEK QSTEDAVRLI QKCSEVDLNI VILWKAYVVE DSKQLILEGQ HHVILRTIGK EAFSYPQKQE PPEMELLKFF RPENITVSSR PSVEQLSSLI KTSLHYPESF NHPFHQKSLC LVPVTLLLSN CSKADVDVIV DLRHKTTSPE ALEIHGSFTW LGQTQYKLQL KSQEIHSLQL KACFVHTGVY NLGTPRVFAK LSDQVTVFET SQQNSMPALI IISNV
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.